Bottom - Previous - Next - CUBIC - PP home

Transmembrane helices for bacsu (Bacillus subtilis)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
328yknu6in131|ali|phd|phdHtm|58540-4.9038,74,158,180,263,287METFKRLKMYYWPYRKVFMW
329yvgx6in88|ali|phd|phdHtm|80351-5.94182,212,249,436,465,785MLSEQKEIAMQVSGMTCAAC
330cydc6in53|ali|phd|phdHtm|56780-8.9038,70,162,184,260,282MGKDLFRYKGMKRILTLITC
331glpf6in51|ali|phd|phdHtm|27432-3.3125,57,99,150,179,231MTAFWGEVIGTMLLIIFGAG
332dppc6in36|ali|phd|phdHtm|32092-9.6375,139,181,203,254,304MNLPVQTDERQPEQHNQVPD
333yckj6in34|ali|phd|phdHtm|23410-1.1453,88,116,155,180,218MFLNNLPALTLGTAIPWDLV
334oppb6in32|ali|phd|phdHtm|31194-11.3327,116,157,188,251,293MLKYIGRRLVYMIITLFVIV
335appb6in31|ali|phd|phdHtm|31795-10.4828,118,159,199,263,306MAAYIIRRTLMSIPILLGIT
336appc6in31|ali|phd|phdHtm|30392-12.1258,123,162,184,236,287MSELQTTPSPEIRLKENISK
337dppb6in28|ali|phd|phdHtm|30894-11.5428,118,157,189,250,293MARYMIKRFWAMAATILVIT
338oppc6in28|ali|phd|phdHtm|30592-12.3661,127,167,189,240,289MQNIPKNMFEPAAANAGDAE
339sunt6in25|ali|phd|phdHtm|70520-2.86187,225,301,324,411,438MNKKKKYVHTKQFNSHDCGL
340ytml6in25|ali|phd|phdHtm|23910-1.0443,79,113,151,175,214MEKAFDMNMIGDFVPTLTAY
341czcd6in17|ali|phd|phdHtm|31163-6.7536,61,100,133,174,198MGHNHNEGANKKVLLISFIM
342yurm6in17|ali|phd|phdHtm|30084-8.3555,114,149,181,233,285MLPQKKTDSFRLEPVPDQHI
343comc6in15|ali|phd|phdHtm|24860-6.1420,80,109,151,204,238MLSILFIFGLILGSFYYTAG
344yurn6in14|ali|phd|phdHtm|29295-10.5431,88,125,177,225,280MVNQNKIIPYLFLVPALVFL
345yrhg6in12|ali|phd|phdHtm|26695-11.5447,84,131,177,206,248MAFRKPDEIAEAAIEAGMKK
346kinb6in11|ali|phd|phdHtm|42962-6.1027,57,89,122,157,190MEILKDYLLHICFILFPILL
347ycbt6in11|ali|phd|phdHtm|24593-12.3040,81,130,175,204,226MDKKETHLIGHLEELRRRII
348ydij6in11|ali|phd|phdHtm|25494-12.2643,89,134,178,208,231MTRMKVNQMSLLEHIAELRK
349yqgi6in10|ali|phd|phdHtm|29494-10.7836,83,128,150,201,282MNRKITDKLATGMFGLCAAI
350yvfm6in10|ali|phd|phdHtm|28374-7.1536,98,134,160,212,267MLADMKVRRYIRLLFSYLLL
351araq6in9|ali|phd|phdHtm|28174-7.8435,97,137,159,215,266MLRHSPQFSVYRIALTLFFM
352yesp6in9|ali|phd|phdHtm|30996-11.2846,103,141,188,235,293MTGNGADAMKKSRSIRKDNL
353lplc6in8|ali|phd|phdHtm|29564-6.9239,101,133,162,214,281MAEIHTMHNTKAGRVFDVCN
354yvdi6in8|ali|phd|phdHtm|27864-6.6134,93,129,155,207,262MNASTARMLNKICTYLFLTL
355yesq6in7|ali|phd|phdHtm|29695-9.4549,114,150,177,228,283MEPVNQPVREAPVFERKKAG
356ytcp6in7|ali|phd|phdHtm|28675-7.5430,91,124,151,204,271MKNRLFDMLIYGFLLMFALI
357amyc6in6|ali|phd|phdHtm|27696-9.7332,91,127,156,208,261MRAARTKSMRIITLLAAIVA
358geraa6in6|ali|phd|phdHtm|48211-1.11260,299,341,367,389,427MEQTEFKEYIHDNLALVLPK
359yluc6in6|ali|phd|phdHtm|42230-3.8323,45,194,367,389,414MFVNTVIAFIIIFGTLVFFH
360ypdp6in5|ali|phd|phdHtm|22941-4.3024,62,106,145,181,210MFNNSFWIFFAIIHFIIVLL
361yybl6in5|ali|phd|phdHtm|23694-18.0923,64,120,145,170,225MKIKRLLLILCLLLFLVTLW
362ydca6in4|ali|phd|phdHtm|19995-10.3934,83,113,144,169,191MFIRTENFQTFIRLYPVVTF
363ydfm6in4|ali|phd|phdHtm|29780-8.2733,60,100,133,171,201MASEREQISRKVALIALIAN
364yite6in4|ali|phd|phdHtm|20961-6.3828,50,124,146,176,198MAELLMKAKLTFMIVVGGVL
365ykoy6in4|ali|phd|phdHtm|32443-4.3289,136,191,235,264,297MYSGNKVVISWIVSIGFVGM
366ywcj6in4|ali|phd|phdHtm|25685-8.4446,81,127,175,204,246METQALQKVEQYALKKQNIF
367yxkd6in4|ali|phd|phdHtm|27890-13.9428,70,92,120,142,171MKKRMLDVLMLVIGAFFFAL
368yybm6in4|ali|phd|phdHtm|25166-6.1232,69,124,174,203,240MESHIYRIIKNKLTIIIFTI
369lplb6in3|ali|phd|phdHtm|31894-9.0354,115,155,202,247,303METVPKKRDAPVLTAGKGIS
370ycze6in3|ali|phd|phdHtm|21580-8.4831,67,96,125,184,206MKQELVLRWTFYFAGLIILA
371yxxb6in3|ali|phd|phdHtm|28991-11.7045,84,127,171,219,265MAVKDRYMSKIKQETKPWIK
372yabq6in2|ali|phd|phdHtm|21191-13.3537,59,83,108,144,167MTLTTQFYTMLAMSGMGLWL
373ydbk6in2|ali|phd|phdHtm|24695-18.4829,68,113,153,178,237MKLFNRKVTLVSLILMAVFQ
374ydeo6in2|ali|phd|phdHtm|29090-16.4235,75,99,130,180,202MNTPKKHKKFKAKMILQIIM
375yesv6in2|ali|phd|phdHtm|20874-7.1836,65,93,135,160,189MKTTVTDALYAGCEAVVKIA
376yhge6in2|ali|phd|phdHtm|77590-11.0635,602,642,675,697,758MNTIRSQWKDIVTSKKLLIP
377yyas6in2|ali|phd|phdHtm|20190-14.6625,64,94,117,175,197MKYMYYGIGILILSLGISLT
378yydj6in2|ali|phd|phdHtm|24091-18.1833,70,120,167,189,228MKLEFKKSISNKVIIILGAM
379kbaa6in1|ali|phd|phdHtm|19893-14.1928,68,105,135,164,192MKSRGLVRFFFSILAVGALI
380ydil6in1|ali|phd|phdHtm|24474-7.0726,64,102,142,185,214MRKQYWFIILTYIIMQFSAL
381yfim6in1|ali|phd|phdHtm|39692-12.4841,222,277,304,333,391MKKSIWIAWKDVKIRITDRK
382yfkh6in1|ali|phd|phdHtm|27563-6.7544,100,144,185,225,255MSFLKELFSRYTLHEGQSKS
383yhce6in1|ali|phd|phdHtm|25395-9.8836,64,115,158,188,242MNSFLGLLKKDIKLSRMWLL
384yhci6in1|ali|phd|phdHtm|31393-10.5835,128,171,225,254,305MLNLIYNEWLKIFSRAGTWV
385yoak6in1|ali|phd|phdHtm|22532-3.6442,77,113,142,185,213MTAAAYRNTLLSLLCLTAGI
386yoce6in1|ali|phd|phdHtm|35200-0.8447,73,108,171,209,231MTEQTIAHKQKQLTKQVAAF
387yqed6in1|ali|phd|phdHtm|20895-15.6822,57,86,141,172,196MLKKVIGILVIIAIISVGFF
388yuaj6in1|ali|phd|phdHtm|19294-23.5628,51,75,102,142,180MNQSKQLVRLIEIAIMTAAA
389yueb6in1|ali|phd|phdHtm|107660-6.1928,925,955,987,1010,1059MTEQRKSLIKLISAVIIILL
390yuig6in1|ali|phd|phdHtm|20096-16.4832,58,80,107,143,180MKQRKLRAGDMALIGMFAAL
391yvaz6in1|ali|phd|phdHtm|20790-12.8223,64,99,121,165,193MKKNIISIIIVCLSFLTSII
392yvfs6in1|ali|phd|phdHtm|24593-15.1639,71,125,154,183,234MNVLQKQSIAEMKRVLRNKY
393ywic6in1|ali|phd|phdHtm|23953-5.4438,93,133,157,200,236MKALIPKQHGAWAMLLIPFL
394ywra6in1|ali|phd|phdHtm|17892-9.8218,64,88,129,151,175MISIYLFMAFFIANLLGYGG
395yxlg6in1|ali|phd|phdHtm|25962-6.1640,91,134,174,196,255MKVMMALLQKEWLEGWKSGK
396flha6out45|ali|phd|phdHtm|677313.2536,72,117,205,246,298MSTRDLSVLISVVLIVAIVV
397ycka6out34|ali|phd|phdHtm|226000.8547,83,112,150,176,213MINSIQWEYIFNTKLAIESF
398yxen6out25|ali|phd|phdHtm|22400-0.3042,77,108,146,173,209MNTIDWEFMISAFPTLIQAL
399ytmm6out16|ali|phd|phdHtm|235313.4243,76,118,158,183,217MQFDFPFIVSAMKEMVKTIP
400ybaf6out6|ali|phd|phdHtm|26503-0.6051,86,127,170,215,262MMDSMIIGKYVPGTSLVHRL
401ywaf6out6|ali|phd|phdHtm|237202.3539,67,113,152,187,230MQKYVQSDYKHDPFHLFSTE
402lyts6out5|ali|phd|phdHtm|59301-0.8827,58,108,138,174,202MIHLMIMMLERVGIIVILGF
403ccda6out4|ali|phd|phdHtm|2359714.8131,75,107,155,183,219MGDVNYFLTFGAGFLSFISP
404yvbg6out4|ali|phd|phdHtm|2119412.4226,69,91,136,166,200MMFSFIVHVFISLFAVSNPI
405yqgp6out3|ali|phd|phdHtm|5079110.62246,279,301,329,356,378MFLLEYTYWKIAAHLVNSGY
406azlc6out2|ali|phd|phdHtm|254030.8453,82,104,173,198,238MNKNKESLHLSSPAINTHMN
407spovaf6out2|ali|phd|phdHtm|49200-0.35125,269,312,352,385,407MPDHKEEKIRVYRNPAKNEE
408yhfc6out2|ali|phd|phdHtm|258818.3728,56,95,138,199,250MVSQEAVVFLALSGAIAFLL
409yisu6out2|ali|phd|phdHtm|220454.8537,82,105,145,184,214MTISLMIEKKCERSFFSMNA
410ykoc6out2|ali|phd|phdHtm|254525.1239,73,131,157,200,252MKQPLHLINPTVKAAAVFCC
411yvbi6out2|ali|phd|phdHtm|232707.2250,88,122,161,186,220MYCPQCGHQTDGGNFCEKCG
412flir6out1|ali|phd|phdHtm|25905-0.0526,52,99,143,194,240MNSIIDLFPAFLLVFIRISA
413ycef6out1|ali|phd|phdHtm|257030.2350,99,150,184,215,239MDFLHHILSTYASFFDWKMW
414ydbi6out1|ali|phd|phdHtm|350646.9644,92,161,232,280,326MAALVKFFQHPGVRRFSIFV
415ydbt6out1|ali|phd|phdHtm|493303.0438,64,209,253,311,393MMSEPKRLHPVAVILNLCHT
416yetj6out1|ali|phd|phdHtm|214848.3345,89,115,145,168,207MQATVHESKQSIMQRILTVF
417yfiw6out1|ali|phd|phdHtm|258131.4826,70,108,148,179,218MLIKKNALSILKIVFPIAVL
418yfix6out1|ali|phd|phdHtm|606424.6147,108,144,188,227,268MPGGFGSFDLLFLLGMEQLG
419yjbe6out1|ali|phd|phdHtm|218121.6327,75,125,155,177,212MEHDYLISLLVIVGIDLILG
420yybk6out1|ali|phd|phdHtm|2519212.6521,63,116,152,179,235MRIKGFFITLVAIIFQASLS
421qcrb5in380|ali|phd|phdHtm|22425-2.1462,112,145,172,211MLNKIYDWVDERLDITPMWR
422yvcc5in171|ali|phd|phdHtm|58920-2.3746,83,174,269,296MPTKKQKSKSKLKPFFALVR
423ygad5in165|ali|phd|phdHtm|58920-2.5347,90,180,277,302MIKREGESTVGVMKRYMQFV
424yheh5in101|ali|phd|phdHtm|67330-3.1799,172,263,358,383MKIGKTLWRYALLYRKLLIT
425yknv5in100|ali|phd|phdHtm|60421-2.3760,103,196,291,313MKQAKKQGVLERFYYSSDEI
426ykvw5in60|ali|phd|phdHtm|63741-4.2663,113,271,303,620MNEQVIVQRDPHEPLKTDKR
427qoxc5in58|ali|phd|phdHtm|20485-8.8747,82,115,159,197MEHAEHGNSNAPMEYQSETG
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
428ctae5in56|ali|phd|phdHtm|20794-9.7448,85,118,162,201MQVQEKFTAETFPASPEKVT
429ygam5in11|ali|phd|phdHtm|27625-2.4450,105,154,214,258MMKAEAAGSLPKTNAEAVRK
430ynes5in9|ali|phd|phdHtm|19393-16.2319,63,92,135,171MLIALLIILAYLIGSIPSGL
431levg5in6|ali|phd|phdHtm|27593-10.74127,152,203,248,270MEKEKRLTKKEIFSMFIRSN
432yitt5in5|ali|phd|phdHtm|28094-10.8631,72,95,125,178MVLDQTKKLLIVIIGALLNA
433yacl5in4|ali|phd|phdHtm|36632-3.5026,60,103,127,200MLKRIVQAFFIIFGGVVGIF
434yqfu5in4|ali|phd|phdHtm|29394-11.6138,84,106,134,187MTPTKQHKKETFTHFIFRVF
435yvja5in4|ali|phd|phdHtm|28194-10.5134,74,96,124,177MDVRNKTLWILRDYVYILIG
436ypja5in3|ali|phd|phdHtm|18535-3.4918,55,89,126,174MLILVLAINFLGTVYGYYWY
437ytxb5in3|ali|phd|phdHtm|21325-2.9367,96,145,175,197MKRKTAVKWLAVLAGAGLLY
438yufu5in3|ali|phd|phdHtm|14364-6.9932,58,88,111,133MNEQKTNDLILQTATKLVSF
439ywhc5in3|ali|phd|phdHtm|21923-2.3927,77,113,147,199MDRFLYYPLSLMPYLVITLI
440sdhc5in2|ali|phd|phdHtm|20283-8.4632,74,116,157,199MSGNREFYFRRLHSLLGVIP
441ydbo5in2|ali|phd|phdHtm|29090-12.2234,61,100,135,187MERTENLKKGEKGALLNIFA
442ydfh5in2|ali|phd|phdHtm|40793-12.8150,72,107,143,168MLIRNPFKDKYYSHDRRALN
443yfle5in2|ali|phd|phdHtm|64990-20.2728,61,90,139,170MKTFIKERGLAFFLIAVVLL
444yknw5in2|ali|phd|phdHtm|23193-10.6957,111,153,193,224METNVEKNSGTATEKPSLFG
445ykok5in2|ali|phd|phdHtm|45192-12.58302,329,389,413,445MVQNMTYDELILRIIILLRD
446yqgc5in2|ali|phd|phdHtm|16034-3.0125,54,76,112,154MDMLYWLLIAAVFIIAFIGL
447yshb5in2|ali|phd|phdHtm|17751-5.9718,49,99,138,165MLDIIILILLLMGTLLGLKR
448ywhm5in2|ali|phd|phdHtm|23314-1.3227,65,139,162,217MKQSTVFTLLLLLIGMAAYS
449ftsx5in1|ali|phd|phdHtm|29602-0.0646,193,240,262,285MIKILGRHLRESFKSLGRNT
450spma5in1|ali|phd|phdHtm|19694-11.4619,57,106,156,184MVNIIWVSLTVIGLVFAMCN
451spmb5in1|ali|phd|phdHtm|17964-6.2725,71,95,147,174MEIINWLSLAMIPIIIAGIL
452spoivfb5in1|ali|phd|phdHtm|28824-2.8639,61,107,137,190MNKWLDLILKIHVHPFLWII
453ycgb5in1|ali|phd|phdHtm|19391-16.2450,73,117,146,193MNNLRNRLSGVNGKNKRVKE
454ycgf5in1|ali|phd|phdHtm|20965-6.9463,85,134,170,201MNIFLSYIVLGLSLSAPVGP
455yeab5in1|ali|phd|phdHtm|29090-9.9134,62,99,135,188MERYDELKKGESGALVSIAA
456yebc5in1|ali|phd|phdHtm|26790-9.9681,112,153,224,258MTEERKETFEEEINQSERID
457ykoe5in1|ali|phd|phdHtm|19997-13.6330,58,91,149,171MKSWKVKEIVIMSVISIVFA
458ylaa5in1|ali|phd|phdHtm|64690-11.2842,179,206,238,271MLFVLELFSHYVLHFERYFI
459ynej5in1|ali|phd|phdHtm|16395-18.9720,61,83,116,143MISMMIIVSSIIAVLMAVAV
460yozb5in1|ali|phd|phdHtm|17896-23.4432,69,96,135,175MNQTENKPKNYTGIVLTLTV
461yqhq5in1|ali|phd|phdHtm|31831-3.5673,132,167,229,252MSKHKVPPAYGGQAVVEGVM
462ytld5in1|ali|phd|phdHtm|27014-1.6147,106,155,214,254MRNSKETIDLLHEQYQFKQK
463ywde5in1|ali|phd|phdHtm|17796-9.9734,65,97,135,174MRISSCLYGFVAHGAVFLFT
464yydh5in1|ali|phd|phdHtm|25271-7.2976,107,169,209,247MKILKYEDGKYEVLVQNNVF
465ywja5out147|ali|phd|phdHtm|57500-0.7735,77,164,258,284MLRQFFSYYKPYKTLFFLDF
466yfib5out104|ali|phd|phdHtm|573202.0033,72,164,258,284MQKALSFLKPYSLLAGIALI
467cydd5out57|ali|phd|phdHtm|575101.6240,69,162,184,290MKKEEWILPYIKQNARLFVL
468yvgw5out44|ali|phd|phdHtm|702101.91134,174,337,365,682MRLVKQEYVLDGLDCSNCAR
469yqiy5out32|ali|phd|phdHtm|219959.0142,76,104,169,205MNLDFSATIPQIPFILEGLA
470glnp5out27|ali|phd|phdHtm|218969.0442,76,103,157,208MDFIGAYSQEHLAFLWDGFL
471glnm5out24|ali|phd|phdHtm|2169510.1341,74,102,165,202MNVSILFDNFSMYMDGFYHT
472yodm5out16|ali|phd|phdHtm|2039417.9462,90,142,167,189MYKPVSLFLFFLILAAAIHT
473spoiiij5out15|ali|phd|phdHtm|261121.5554,76,152,187,233MLLKRRIGLLLSMVGVFMLL
474pgsa5out12|ali|phd|phdHtm|193040.2726,58,108,154,178MSNLPNKITLARIALIPIFM
475nari5out10|ali|phd|phdHtm|2239315.1324,70,108,143,203MSGQILWGIMPYIVLTIFIG
476opubb5out8|ali|phd|phdHtm|2179512.2042,79,101,157,196MHHIVQFLQTNGGELLYKTY
477opubd5out8|ali|phd|phdHtm|2269613.9549,80,103,160,201MNVLEQLMTYYAQNGSYVMD
478opucd5out8|ali|phd|phdHtm|2299512.4247,81,103,159,201MEVLQQLGTYYSQNGGYVLQ
479opucb5out7|ali|phd|phdHtm|2179514.3244,79,101,156,197MNQMMTFLQTNGGELLYKTG
480pssa5out7|ali|phd|phdHtm|1779310.7939,81,104,139,161MNYIPCMITIGNFICGLLAI
481yhdy5out7|ali|phd|phdHtm|371949.1536,80,110,157,189MPDYLQQYFTLDNIIQIGIS
482gerka5out6|ali|phd|phdHtm|54400-0.08298,335,404,427,459MPLFSKRKNNTDSKDKQNTD
483yqjg5out6|ali|phd|phdHtm|275040.8758,80,161,195,247MLKTYQKLLAMGIFLIVLCS
484yusb5out6|ali|phd|phdHtm|222969.7443,80,109,169,210MFEKYFPNVDLTELWNATYE
485gerba5out5|ali|phd|phdHtm|482818.25262,302,343,384,429MQIDSDLQNNLDTLKKTLGQ
486yngc5out5|ali|phd|phdHtm|198858.3735,66,129,151,189MGSLISEILTWLTNMGYAGI
487ywjf5out4|ali|phd|phdHtm|7059115.1226,90,130,163,218MSGFLIANALLFLIVTAYAV
488yocf5out3|ali|phd|phdHtm|37003-0.3832,57,87,124,148MIKNHFTFQKLNGITPYIWT
489yrkk5out3|ali|phd|phdHtm|158030.5418,60,90,122,148MVYFVAFFCFAITLHNIEEA
490ywoa5out3|ali|phd|phdHtm|193818.5943,70,132,164,186MNYEIFKAIHGLSHHNSVLD
491spoiiga5out2|ali|phd|phdHtm|3099231.4827,56,78,104,147MKIYLDVIWLLNFCFDALLL
492yhfu5out2|ali|phd|phdHtm|186676.1233,75,100,139,169MLKLIDMMHIAIFTALMAVL
493ykox5out2|ali|phd|phdHtm|2219610.8446,79,141,164,200MIHKHETRELVAIEELVMSW
494yrhp5out2|ali|phd|phdHtm|2109515.3822,68,90,143,175MHSLLAYIPIAAMMVIIPGA
495yvjd5out2|ali|phd|phdHtm|397525.1133,89,152,229,273MSVQWGIELLKSAGLFFLHP
496ywld5out2|ali|phd|phdHtm|185848.1429,60,87,132,184MSDLFIGELITLSIMAFALG
497ydjj5out1|ali|phd|phdHtm|341414.0526,81,124,160,221MNEGYIIAGLLLLTAGMIDF
498yeba5out1|ali|phd|phdHtm|6559011.7478,100,123,158,584MVCHRSFLCHIYIDLDTHPV
499yesl5out1|ali|phd|phdHtm|2099615.4643,99,128,162,187MLMIHSVANGLNHFCTWVMR
500yfhp5out1|ali|phd|phdHtm|3279016.9041,87,112,151,174MDTGTHVVMGIALGGIATLD
501yfin5out1|ali|phd|phdHtm|385424.45215,265,292,324,378MKKILAICGIELSLIFKKPQ
502yhag5out1|ali|phd|phdHtm|1729614.5428,60,94,129,157MKTKELVIMALFAAIGAALH
503yhje5out1|ali|phd|phdHtm|2079610.6049,78,133,160,184MLEHFLSYLTQEHLTELFQS
504ymcc5out1|