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Transmembrane helices for bacsu (Bacillus subtilis)
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 594 | ydas | 3 | in | 16 | |ali|phd|phdHtm| | 85 | 5 | 9 | -5.59 | 21,46,75 | MLSFLVSLVVAIVIGLIGSA |
| 595 | bofa | 3 | in | 8 | |ali|phd|phdHtm| | 87 | 3 | 9 | -3.68 | 21,50,80 | MEPIFIIGIILGLVILLFLS |
| 596 | ywie | 3 | in | 7 | |ali|phd|phdHtm| | 500 | 3 | 1 | -3.50 | 24,48,79 | MLKRRLEFFFLYMMLIGAYV |
| 597 | dgka | 3 | in | 6 | |ali|phd|phdHtm| | 114 | 2 | 2 | -2.49 | 52,74,111 | MNRFFKSFVHAGRGIWETAR |
| 598 | xylr | 3 | in | 6 | |ali|phd|phdHtm| | 350 | 1 | 0 | -1.54 | 64,191,286 | MTGLNKSTVSSQVNTLMKES |
| 599 | ydbl | 3 | in | 5 | |ali|phd|phdHtm| | 111 | 6 | 9 | -6.22 | 32,61,95 | MRNFITALPIVLLLGFSFVS |
| 600 | yhdk | 3 | in | 5 | |ali|phd|phdHtm| | 96 | 9 | 9 | -9.61 | 32,56,86 | MELVRIFKEHNVFGWISVGT |
| 601 | cits | 3 | in | 4 | |ali|phd|phdHtm| | 542 | 9 | 0 | -10.77 | 32,196,435 | MVKKRFHFSLQTKIMGLIAA |
| 602 | ctaf | 3 | in | 4 | |ali|phd|phdHtm| | 110 | 9 | 9 | -16.60 | 47,71,108 | MVDKKSRGHINSDLEFKKKK |
| 603 | ydze | 3 | in | 4 | |ali|phd|phdHtm| | 78 | 9 | 5 | -26.00 | 18,45,68 | MYLGIVSTACAFLLWNHGLQ |
| 604 | yufv | 3 | in | 4 | |ali|phd|phdHtm| | 113 | 7 | 4 | -7.39 | 21,43,89 | MEILMAVLAGIIFMAATYLL |
| 605 | yckc | 3 | in | 3 | |ali|phd|phdHtm| | 151 | 3 | 0 | -3.83 | 42,64,112 | MNIYKPAGFWIRLGAALLDY |
| 606 | ykoa | 3 | in | 3 | |ali|phd|phdHtm| | 89 | 2 | 9 | -2.65 | 23,45,81 | MRLLTLTEYCLLIFFTGFYL |
| 607 | ylmg | 3 | in | 3 | |ali|phd|phdHtm| | 90 | 5 | 0 | -5.23 | 28,55,83 | MILYQVFSVLSLLITIYSFA |
| 608 | ytfi | 3 | in | 3 | |ali|phd|phdHtm| | 226 | 9 | 4 | -9.93 | 18,147,199 | MVYVLTAILILIGIVLLLRM |
| 609 | ytza | 3 | in | 3 | |ali|phd|phdHtm| | 127 | 9 | 7 | -14.37 | 19,41,101 | MRFLFLLFIVFPAIEIGIFL |
| 610 | yvqe | 3 | in | 3 | |ali|phd|phdHtm| | 360 | 9 | 2 | -15.98 | 44,66,91 | MRKKMLASLQWRAIRMTTGI |
| 611 | ywre | 3 | in | 3 | |ali|phd|phdHtm| | 111 | 3 | 2 | -3.14 | 21,73,111 | MTNFWILMLIAITISLASQF |
| 612 | yxai | 3 | in | 3 | |ali|phd|phdHtm| | 151 | 3 | 8 | -3.59 | 34,79,132 | MEKPAGFWIRFLAYFIDGII |
| 613 | yfkc | 3 | in | 2 | |ali|phd|phdHtm| | 280 | 6 | 3 | -6.31 | 33,86,111 | MRMKETLTEIFQNKIVDILL |
| 614 | yisl | 3 | in | 2 | |ali|phd|phdHtm| | 118 | 9 | 9 | -9.50 | 58,80,112 | MTHLHITTWVVALILLFVSY |
| 615 | yrdb | 3 | in | 2 | |ali|phd|phdHtm| | 123 | 4 | 1 | -4.19 | 31,53,104 | MEKLNQTNLLLRFTLEIAAL |
| 616 | yuid | 3 | in | 2 | |ali|phd|phdHtm| | 158 | 4 | 5 | -4.11 | 27,85,158 | MELLTNFPLLSSLAAIIFAQ |
| 617 | yvfa | 3 | in | 2 | |ali|phd|phdHtm| | 109 | 9 | 9 | -11.47 | 30,66,103 | MKFTINFSANLTAFLLSVFL |
| 618 | yxjm | 3 | in | 2 | |ali|phd|phdHtm| | 406 | 6 | 0 | -6.18 | 34,63,113 | MNGQTPARHYYKKLVPSLIL |
| 619 | qoxd | 3 | in | 1 | |ali|phd|phdHtm| | 124 | 8 | 9 | -8.11 | 34,57,96 | MANKSAEHSHFPWKHIVGFI |
| 620 | spoiisa | 3 | in | 1 | |ali|phd|phdHtm| | 248 | 9 | 2 | -16.67 | 20,55,83 | MVLFFQIMVWCIVAGLGLYV |
| 621 | tagb | 3 | in | 1 | |ali|phd|phdHtm| | 381 | 4 | 1 | -4.49 | 25,106,294 | MKIRSLLANCYLYFLSAIAF |
| 622 | ybgb | 3 | in | 1 | |ali|phd|phdHtm| | 91 | 9 | 9 | -13.33 | 29,64,88 | MFLFTNGKVLWGAVIAAFIL |
| 623 | ycbu | 3 | in | 1 | |ali|phd|phdHtm| | 370 | 9 | 0 | -9.46 | 95,220,276 | MEHLPEQYRQLFPTLQTHTM |
| 624 | ydcq | 3 | in | 1 | |ali|phd|phdHtm| | 480 | 5 | 1 | -5.35 | 45,84,254 | MSDFLNKRFWKYRGKRIRPY |
| 625 | ydfd | 3 | in | 1 | |ali|phd|phdHtm| | 482 | 3 | 2 | -3.67 | 195,428,455 | MSFPEEKKMKKLPKYRQIVH |
| 626 | yeek | 3 | in | 1 | |ali|phd|phdHtm| | 378 | 9 | 1 | -19.07 | 111,134,178 | MTDTRHMYGGPGFGHYQGFG |
| 627 | ynag | 3 | in | 1 | |ali|phd|phdHtm| | 91 | 9 | 9 | -25.00 | 35,57,87 | MNVKKAAAVFSITIPIISAI |
| 628 | yqgy | 3 | in | 1 | |ali|phd|phdHtm| | 81 | 9 | 7 | -15.08 | 23,45,71 | MNRMFRVLGFWTGIFAVMFY |
| 629 | ytab | 3 | in | 1 | |ali|phd|phdHtm| | 155 | 4 | 3 | -4.29 | 23,64,124 | MKKIVGALAVFVITYALFSA |
| 630 | yugm | 3 | in | 1 | |ali|phd|phdHtm| | 123 | 8 | 9 | -8.33 | 33,58,106 | MFMKQLVKHLIIAGFSAAIL |
| 631 | ywdc | 3 | in | 1 | |ali|phd|phdHtm| | 142 | 2 | 8 | -2.49 | 43,80,119 | MMFNMALNLFYHRLTLRKPF |
| 632 | ywob | 3 | in | 1 | |ali|phd|phdHtm| | 154 | 9 | 6 | -16.88 | 36,106,129 | MMNKGGRLRKAVRKSIPATF |
| 633 | ymfd | 3 | out | 35 | |ali|phd|phdHtm| | 124 | 9 | 5 | 9.53 | 58,87,111 | MKNIIALSSVPLVMTLGNSM |
| 634 | ebrb | 3 | out | 17 | |ali|phd|phdHtm| | 117 | 6 | 9 | 6.47 | 52,78,100 | MRGLLYLALAIVSEVFGSTM |
| 635 | yvem | 3 | out | 16 | |ali|phd|phdHtm| | 598 | 9 | 2 | 14.59 | 52,84,109 | MIIALDTYLVLNSVIAGYQF |
| 636 | yvrl | 3 | out | 11 | |ali|phd|phdHtm| | 136 | 3 | 0 | 3.19 | 62,100,131 | MKHQNPSKRLLRLSIKYLLA |
| 637 | yhdu | 3 | out | 10 | |ali|phd|phdHtm| | 118 | 0 | 8 | 0.72 | 54,79,110 | MTLAGIFIGGGLGAMLRFWL |
| 638 | yhdv | 3 | out | 10 | |ali|phd|phdHtm| | 131 | 9 | 7 | 9.20 | 51,78,115 | MKIYSAVFIGGALGACLRYG |
| 639 | yfjf | 3 | out | 9 | |ali|phd|phdHtm| | 109 | 2 | 8 | 2.22 | 53,76,106 | MMLITILLFLAAGLAEIGGG |
| 640 | yycq | 3 | out | 7 | |ali|phd|phdHtm| | 82 | 7 | 9 | 7.06 | 23,50,72 | MGAIAVLFIVFGFPIVAGVF |
| 641 | ykut | 3 | out | 5 | |ali|phd|phdHtm| | 267 | 1 | 4 | 1.72 | 37,89,111 | MDFIKQYDWAGLITNAGVLL |
| 642 | yczc | 3 | out | 4 | |ali|phd|phdHtm| | 127 | 1 | 0 | 1.15 | 40,62,105 | MELAGFMLRACALLLDVIIA |
| 643 | ydfr | 3 | out | 4 | |ali|phd|phdHtm| | 225 | 2 | 4 | 2.60 | 52,80,102 | MNRLPFGYIKLRLAGRKANP |
| 644 | ypjc | 3 | out | 4 | |ali|phd|phdHtm| | 215 | 4 | 3 | 4.56 | 18,50,106 | MFVYTLVGTVALSLFLSIFQ |
| 645 | yteq | 3 | out | 4 | |ali|phd|phdHtm| | 163 | 9 | 6 | 9.81 | 47,90,149 | MINELIVFFGGEKINFLLNE |
| 646 | yvrm | 3 | out | 4 | |ali|phd|phdHtm| | 253 | 6 | 7 | 6.18 | 149,204,234 | MMINEAVRDELFPDGEALHK |
| 647 | ytej | 3 | out | 3 | |ali|phd|phdHtm| | 164 | 2 | 7 | 2.69 | 54,89,140 | MDATYEELERNDIKGPQEAE |
| 648 | yufc | 3 | out | 3 | |ali|phd|phdHtm| | 94 | 9 | 6 | 18.04 | 24,55,79 | MFTLILQIALGIMGVSTFLY |
| 649 | azld | 3 | out | 2 | |ali|phd|phdHtm| | 110 | 8 | 6 | 8.66 | 26,63,100 | MTMTMTQQMITIAMVVLGTM |
| 650 | yetf | 3 | out | 2 | |ali|phd|phdHtm| | 231 | 9 | 3 | 9.54 | 26,54,77 | MGNYLSVAVELVCGLGILFI |
| 651 | yqxh | 3 | out | 2 | |ali|phd|phdHtm| | 140 | 9 | 8 | 14.61 | 38,81,103 | MEETSLFINFETLDLARVYL |
| 652 | yrbg | 3 | out | 2 | |ali|phd|phdHtm| | 218 | 9 | 3 | 19.06 | 25,51,78 | MEELLTIAFRTVVLYFVILV |
| 653 | yuib | 3 | out | 2 | |ali|phd|phdHtm| | 106 | 9 | 9 | 14.21 | 30,52,94 | MISLPVVIISIVLFFVLFFG |
| 654 | ywcd | 3 | out | 2 | |ali|phd|phdHtm| | 127 | 9 | 3 | 14.62 | 23,45,114 | MYIIMGVFTTIVNIASFYIL |
| 655 | ywla | 3 | out | 2 | |ali|phd|phdHtm| | 120 | 9 | 9 | 13.07 | 40,81,110 | MKYNYTVLLSAFTMSVLYSV |
| 656 | ywrb | 3 | out | 2 | |ali|phd|phdHtm| | 197 | 5 | 8 | 5.44 | 101,126,174 | MKNHPYRDMTAAMVRTGILG |
| 657 | yxce | 3 | out | 2 | |ali|phd|phdHtm| | 216 | 7 | 2 | 7.01 | 26,162,204 | MKLKYVKALVAVTVALGVLL |
| 658 | eag | 3 | out | 1 | |ali|phd|phdHtm| | 143 | 9 | 9 | 21.23 | 58,80,123 | MKELAILITEMVNQFHDAFI |
| 659 | ycgq | 3 | out | 1 | |ali|phd|phdHtm| | 285 | 0 | 3 | 0.89 | 49,109,226 | MFRLLVLMGFTFFFYHLHAS |
| 660 | ydak | 3 | out | 1 | |ali|phd|phdHtm| | 283 | 4 | 4 | 4.62 | 32,65,109 | MKISFSESQKLFAYFSGLIA |
| 661 | yddd | 3 | out | 1 | |ali|phd|phdHtm| | 174 | 8 | 2 | 8.50 | 51,81,104 | MGRLVFNYRKAMREPKKIQQ |
| 662 | ydfs | 3 | out | 1 | |ali|phd|phdHtm| | 235 | 9 | 3 | 11.40 | 24,51,79 | MIELEVVIRTVASFGLLLIA |
| 663 | yesk | 3 | out | 1 | |ali|phd|phdHtm| | 129 | 9 | 9 | 13.01 | 60,95,117 | MNSWVLMRPDIICLRKRLRQ |
| 664 | yjga | 3 | out | 1 | |ali|phd|phdHtm| | 132 | 4 | 9 | 4.21 | 30,71,123 | MKRNRWIYAVFTILIIGLGL |
| 665 | ykja | 3 | out | 1 | |ali|phd|phdHtm| | 243 | 5 | 3 | 5.45 | 22,54,76 | MLWMVWVFLLKPVIVFSIAY |
| 666 | yndm | 3 | out | 1 | |ali|phd|phdHtm| | 179 | 7 | 6 | 7.46 | 72,108,135 | MTIMNGFELHYLSFVYAQEF |
| 667 | ynze | 3 | out | 1 | |ali|phd|phdHtm| | 101 | 9 | 9 | 18.18 | 32,64,92 | MLTDPAEEAFLPNFLLLGAG |
| 668 | yobj | 3 | out | 1 | |ali|phd|phdHtm| | 280 | 9 | 1 | 16.03 | 30,181,226 | MELLDIWNWIQQNGILTAVI |
| 669 | ypbq | 3 | out | 1 | |ali|phd|phdHtm| | 168 | 3 | 7 | 3.28 | 59,84,149 | MFWLLIAILIVQRAAEMAVA |
| 670 | yqxl | 3 | out | 1 | |ali|phd|phdHtm| | 317 | 9 | 1 | 12.42 | 135,258,289 | MKAHTGKDWFWYQMGPQERS |
| 671 | ysda | 3 | out | 1 | |ali|phd|phdHtm| | 89 | 7 | 9 | 7.43 | 18,55,85 | MIIAAYLVLINLCGFWVMGI |
| 672 | ytvb | 3 | out | 1 | |ali|phd|phdHtm| | 111 | 4 | 2 | 4.04 | 23,57,87 | MKMLHQVLIACVIGGIMGIL |
| 673 | yuaf | 3 | out | 1 | |ali|phd|phdHtm| | 174 | 9 | 7 | 10.53 | 31,62,92 | MELFGVPIQTMYLYTLIIAG |
| 674 | yvft | 3 | out | 1 | |ali|phd|phdHtm| | 328 | 9 | 2 | 15.08 | 46,84,111 | MLLLFVAAYRQLFCSVGKAS |
| 675 | yvla | 3 | out | 1 | |ali|phd|phdHtm| | 108 | 7 | 9 | 7.14 | 28,68,97 | MNRNQAIIASLCYFSVFIAP |
| 676 | yvqf | 3 | out | 1 | |ali|phd|phdHtm| | 241 | 3 | 3 | 3.65 | 38,81,194 | MTKKQLLGLIIALFGISMFL |
| 677 | ywce | 3 | out | 1 | |ali|phd|phdHtm| | 87 | 9 | 9 | 37.50 | 22,46,76 | MMDMFFAYLLVASATPLFIW |
| 678 | ywmf | 3 | out | 1 | |ali|phd|phdHtm| | 159 | 9 | 3 | 10.77 | 29,109,131 | MFGFNDMVKFLWSFLIVLPL |
| 679 | yxeg | 3 | out | 1 | |ali|phd|phdHtm| | 185 | 9 | 7 | 12.22 | 31,88,134 | MRNQKAERLVAAGLVLHIIQ |
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