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Transmembrane helices for bacsu (Bacillus subtilis)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
827ycnh1in184|ali|phd|phdHtm|46213-1.92150MPDQLTVYNPATGEEIKTIP
828ycbd1in175|ali|phd|phdHtm|48812-1.68172MSVITEQNTYLNFINGEWVK
829dhas1in174|ali|phd|phdHtm|49512-1.16184MSSLTMQVTKRLETFLQGTK
830yfmt1in157|ali|phd|phdHtm|48532-3.76169MFQYEELNKQFIGGKWQEGS
831aldy1in108|ali|phd|phdHtm|48522-2.12169MSFETLNKSFINGKWTGGES
832yvra1in63|ali|phd|phdHtm|44252-5.83383MKAEGLSGGYGDSRLINNVS
833pbpa1in58|ali|phd|phdHtm|71691-28.1840MRRNKPKKQNHKEKKKSLPI
834spovd1in37|ali|phd|phdHtm|64581-8.0232MRVSNVTVRKRLLFVLLFGV
835htra1in36|ali|phd|phdHtm|44972-7.1467MDNYRDENRTKGNENEVFLT
836pbpb1in36|ali|phd|phdHtm|71692-14.3835MIQMPKKNKFMNRGAAILSI
837pona1in36|ali|phd|phdHtm|91491-13.8756MSDQFNSREARRKANSKSSP
838acsa1in34|ali|phd|phdHtm|57212-1.72128MNLKALPAIEGDHNLKNYEE
839aldx1in33|ali|phd|phdHtm|44523-2.64135MEQQVKDDIQRVFQLQKKQQ
840comgc1in26|ali|phd|phdHtm|9839-3.8028MNEKGFTLVEMLIVLFIISI
841pbpf1in25|ali|phd|phdHtm|71491-20.8231MFKIKKKKLFIPIIILVLTA
842sipt1in25|ali|phd|phdHtm|20946-4.7758SIGNALPEPTIDASEIMTEE
843sipv1in25|ali|phd|phdHtm|18466-6.7341SIGNALPEPTIDASEIMKKR
844ywhe1in25|ali|phd|phdHtm|64791-10.1935MDAMTNKRLRLTLKTVRAFI
845sipu1in23|ali|phd|phdHtm|20356-5.0552SIGNALPEPTIDASEIMNAK
846sips1in21|ali|phd|phdHtm|20026-2.7650SIGNALPEPTIDASEIMKSE
847ylop1in21|ali|phd|phdHtm|64891-14.08353MLIGKRISGRYQILRVIGGG
848yosa1in20|ali|phd|phdHtm|3939-3.2538MGFYSGYSGGYSGGGYGSSF
849pbpd1in17|ali|phd|phdHtm|62491-14.7931MTMLRKIIGWILLLCIIPLF
850ydie1in17|ali|phd|phdHtm|34643-4.80106MSEQKDMYVLGIETSCDETA
851yoli1in12|ali|phd|phdHtm|13798-27.8423MKKWIVLFLVLIAAAISIFV
852motb1in9|ali|phd|phdHtm|26195-16.6641MARKKKKKHEDEHVDESWLV
853pelb1in9|ali|phd|phdHtm|35733-3.0435PECTATELYASEMKRLCLWF
854ycla1in9|ali|phd|phdHtm|29013-1.02247MDIRQLRYFITIAQEQKITS
855ywtf1in9|ali|phd|phdHtm|32293-14.3038MEERSQRRKKKRKLKKWVKV
856yhar1in7|ali|phd|phdHtm|27535-3.44120MEFVQYACNGAVAEIILNRP
857ytxe1in7|ali|phd|phdHtm|24295-22.7046MKLRRERFERRNGSGKNSQS
858raph1in6|ali|phd|phdHtm|43162-6.51393MSQAIPSSRVGVKINEWYKM
859yddh1in6|ali|phd|phdHtm|32994-16.0028MISKKVVLPLVFSAPFIFFF
860yosp1in6|ali|phd|phdHtm|19565-6.14176MTKIYDAANWSKHEDDFTQM
861lytr1in5|ali|phd|phdHtm|30694-29.3434MRNERRKKKKTLLLTILTII
862xhla1in5|ali|phd|phdHtm|8919-1.5483MQQEADVNVFQQDLADMKGE
863sece1in4|ali|phd|phdHtm|5999-14.3551MRIMKFFKDVGKEMKKVSWP
864yclk1in4|ali|phd|phdHtm|47383-8.6730MMKIKYLYQLLLSHISILIL
865ylaf1in4|ali|phd|phdHtm|6229-2.0136MKKMNWLLLLFAFAAVFSIM
866yvap1in4|ali|phd|phdHtm|23696-10.5476MKFTRRLSHAERSTSRFSIV
867yvhj1in4|ali|phd|phdHtm|39193-38.2442MAERVRVRVRKKKKSKRRKI
868dltd1in3|ali|phd|phdHtm|39293-14.0026MKKRFFGPIILAFILFAGAI
869yban1in3|ali|phd|phdHtm|25475-7.4332MNHFYVWHIKRVKQLIIILI
870yhbj1in3|ali|phd|phdHtm|22195-17.2236MIEDETKGENKMNRGRLILT
871yndl1in3|ali|phd|phdHtm|25295-19.0046MKPAKVSLLRRLLHSLKHVD
872yqad1in3|ali|phd|phdHtm|5589-8.7852MKNNDKKKEVQRKYREEIKK
873yrrl1in3|ali|phd|phdHtm|36093-15.5934MYINQQKKSFFNKKRIILSS
874ysxb1in3|ali|phd|phdHtm|11259-5.2153MIQATIRRSHDKGILSFEMT
875divib1in2|ali|phd|phdHtm|26395-17.9851MNPGQDREKIVNIEERIPKI
876phri1in2|ali|phd|phdHtm|3999-24.4322MKISRILLAAVILSSVFSIT
877spoiib1in2|ali|phd|phdHtm|33294-28.00129MKKRKNKKNSKAAEKALKVT
878tgl1in2|ali|phd|phdHtm|24545-4.00129MIIVSGQLLRPQDIENWQID
879yabt1in2|ali|phd|phdHtm|29794-24.00296MYLAETSDGHVALKVSDDSL
880yknx1in2|ali|phd|phdHtm|37793-32.0023MKKVWIGIGIAVIVALFVGI
881ymfm1in2|ali|phd|phdHtm|18947-4.00112MSLDDLQAATKIQKRYLTAL
882ypfb1in2|ali|phd|phdHtm|5819-1.9927MKTFERLLIKLLFIQAIILL
883yqfd1in2|ali|phd|phdHtm|39893-20.00106MKNKWLSFFSGKVQLELTGR
884yqxm1in2|ali|phd|phdHtm|25394-22.4636MFRLFHNQQKAKTKLKVLLI
885yrai1in2|ali|phd|phdHtm|14499-25.3051MVSESKSLTGCKKVKRTAFI
886ytlr1in2|ali|phd|phdHtm|30993-10.00183MSHWFFIINPTAGHRNGLRV
887yvrn1in2|ali|phd|phdHtm|15149-4.1746MREGISAMLEHIRISFQSIF
888comgg1in1|ali|phd|phdHtm|12489-8.0028MYRTRGFIYPAVLFVSALVL
889flil1in1|ali|phd|phdHtm|14099-34.0024MKKKLMIILLIILIVIGALG
890phrc1in1|ali|phd|phdHtm|4099-26.7926MKLKSKLFVICLAAAAIFTA
891spoiip1in1|ali|phd|phdHtm|40193-22.0038MRNKRRNRQIVVAVNGGKAV
892spoiiq1in1|ali|phd|phdHtm|28394-29.3342MREEEKKTSQVKKLQQFFRK
893ybbm1in1|ali|phd|phdHtm|20895-28.00105MSCPEQIVQLMHMHLDGDIL
894ybdg1in1|ali|phd|phdHtm|29694-14.0028MKTLWKVLKIVFVSLAALVL
895yddb1in1|ali|phd|phdHtm|35493-9.7965MLNKEIGSDKKEESFFRSAF
896yhan1in1|ali|phd|phdHtm|96372-8.00495MTALRIISLHIYQYGKFSNR
897yhbd1in1|ali|phd|phdHtm|23865-6.21209MLCFVFGLNNVTVLCYNVPI
898yhcd1in1|ali|phd|phdHtm|5139-3.1733MKKANPFTHAGLPFLLFPSI
899yhdl1in1|ali|phd|phdHtm|35893-20.0092MMNEEFKKRFDQYKNGEMSD
900yisv1in1|ali|phd|phdHtm|23795-10.11201MTLSQWQPSRKSDVPLHRQI
901yjce1in1|ali|phd|phdHtm|10099-9.1778MNGFLYISINICPHSFFSQS
902ykoi1in1|ali|phd|phdHtm|22695-9.0026MTKTIKTVSFAAAAILVVII
903ykpc1in1|ali|phd|phdHtm|4499-13.7227MLRDLGRRVAIAAILSGIIL
904ykri1in1|ali|phd|phdHtm|38193-20.0083MRRGIIVEKNKKFVTLLTPD
905ylbl1in1|ali|phd|phdHtm|35093-25.5026MLRKKHFSWMLVILILIAVL
906ylxf1in1|ali|phd|phdHtm|21397-17.4136MSGKKKESGKFRSVLLIIIL
907yndk1in1|ali|phd|phdHtm|12179-7.0537MNCFKILHRIKTGKEGFMVF
908yoao1in1|ali|phd|phdHtm|16297-25.4529MRKKNNIKKWLLIIAGFLII
909yoca1in1|ali|phd|phdHtm|22596-20.4631MKKKRKGCFAAAGFMMIFVF
910yodi1in1|ali|phd|phdHtm|8399-18.3380MERYYHLCKNHQGKVVRITE
911ypbe1in1|ali|phd|phdHtm|24095-13.0575MTNMSRVERRKAQNLYEDQN
912ypun1in1|ali|phd|phdHtm|36893-14.9266MMKSEWNEEQIKELLSQLPA
913yrrs1in1|ali|phd|phdHtm|23395-16.5739MSNNQSRYENRDKRRKANLV
914yukc1in1|ali|phd|phdHtm|45193-12.00239MSGEQKSYLENQLEAVAEKT
915yuzg1in1|ali|phd|phdHtm|4649-4.7639MAQNEEKTPKSQKIQDRIIM
916yvbj1in1|ali|phd|phdHtm|60542-4.3673MLFCKNCGSQNNEGAKFCKQ
917yvgv1in1|ali|phd|phdHtm|22295-24.3629MKKKQQSSAKFAVILTVVVV
918yvrp1in1|ali|phd|phdHtm|39793-30.7731MSKKKKWLIGGAICAGVLVL
919ywmb1in1|ali|phd|phdHtm|24694-22.0028MKKKQVSHAIIISVMLSFVI
920ywtb1in1|ali|phd|phdHtm|38092-24.0043MKKELSFHEKLLKLTKQQKK
921yxkc1in1|ali|phd|phdHtm|21396-14.3256MAGKLVPCKACGQEIAKGVK
922yybt1in1|ali|phd|phdHtm|65903-0.5041MPSFYEKPLFRYPIYALIAL
923gbsa1out181|ali|phd|phdHtm|49002-0.20166MSQTLFIDGEWISAEKEQIR
924iola1out134|ali|phd|phdHtm|48702-0.64169MAEIRKLKNYINGEWVESKT
925gutb1out126|ali|phd|phdHtm|353838.32197MTHTVPQNMKAAVMHNTREI
926ydjl1out104|ali|phd|phdHtm|346838.32192MKAARWHNQKDIRIEHIEEP
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
927ywdh1out64|ali|phd|phdHtm|45703-0.84132MNSSIPSIISKHKAYFAAGH
928yjmd1out62|ali|phd|phdHtm|339535.52185MKAVQVRKAYDLVTAEVKKP
929adhb1out47|ali|phd|phdHtm|378838.80202MKAVTYQGIKNVVVKDVPDP
930tdh1out46|ali|phd|phdHtm|3479311.56191MQSGKMKALMKKDGAFGAVL
931yycr1out34|ali|phd|phdHtm|408828.96223MGGMALTGNKAVVYKGKGTV
932tuaa1out33|ali|phd|phdHtm|179686.4858MSAEKSMNVSREFSVQQIHS
933alsr1out28|ali|phd|phdHtm|302232.96246MELRHLQYFIAVAEELHFGK
934tlpc1out26|ali|phd|phdHtm|5739213.08207MLIKRFKMKLGTKILCLVFV
935yoah1out23|ali|phd|phdHtm|534939.08174MISSTVKKNEELKDKMEFQK
936thrc1out21|ali|phd|phdHtm|352031.00105MWKGLIHQYKEFLPVTDQTP
937yfkn1out21|ali|phd|phdHtm|14629025.001446MRIQKRRTHVENILRILLPP
938yjax1out20|ali|phd|phdHtm|312434.36124MKAGILGVGRYIPEKVLTNH
939atpf1out19|ali|phd|phdHtm|1709817.4835MSQLPLELGLSFNGGDILFQ
940yqhk1out16|ali|phd|phdHtm|488525.80342MSNQDQALIFELSREGRIGY
941kina1out12|ali|phd|phdHtm|606626.00177MEQDTQHVKPLQTKTDIHAV
942mure1out11|ali|phd|phdHtm|494929.12318MKLTKLLTYLTTEPSVNDSQ
943yver1out10|ali|phd|phdHtm|3449318.77331METPAVSLLVAVYNTETYIR
944dapb1out9|ali|phd|phdHtm|267141.48139MSNETIKLVIAGPRGRMGQE
945yvfd1out8|ali|phd|phdHtm|216454.20185MKNVAIVGDGGHGKVIRELI
946ywje1unk8|ali|phd|phdHtm|398030.0019MKVFIVIMIIVVIFFALILL
947gltr1out7|ali|phd|phdHtm|296242.38236MNIQLLQVFLTTAREGSISK
948yabc1out7|ali|phd|phdHtm|2929316.04138MLRRQMSFNGKSDMGILYLV
949yuag1out7|ali|phd|phdHtm|5099210.9223MTMPIIMIIGVVFFLLIALI
950yqxc1out6|ali|phd|phdHtm|269545.16170MTSKKERLDVLLVERGLAET
951comea1out5|ali|phd|phdHtm|205151.0028MNWLNQHKKAIILAASAAVF
952ymda1out5|ali|phd|phdHtm|5209216.0022MTPIMMVLISILLILLGLVV
953yrbf1out5|ali|phd|phdHtm|899917.7524MMTGTLGTLVPIILMFAVLY
954ywhr1out5|ali|phd|phdHtm|53191.6037MSPAQRRILLYILSFIFVIG
955yczf1out4|ali|phd|phdHtm|739910.6061MKILGVTGFILICLLAISVL
956spsg1out3|ali|phd|phdHtm|33903-0.64261MHVGIFADGGYEKGMGHVVR
957ycnc1out3|ali|phd|phdHtm|292030.00158MLDKKTDILLAARKLFSEKD
958yczb1out3|ali|phd|phdHtm|709917.3423MFSNIGIPGLILIFVIAIII
959yfjb1out3|ali|phd|phdHtm|407131.64308MSGNIAVDPDKLEQLANDVV
960yhen1out3|ali|phd|phdHtm|282454.2436MRQTRGEASPSAVSLAFKFA
961yabe1out2|ali|phd|phdHtm|437020.4959MGEREGRVDSLLDTLYNLSE
962yfje1out2|ali|phd|phdHtm|1529917.6838MSEALTFESKYALLYLGGGL
963yhal1unk2|ali|phd|phdHtm|70090.0020MLFFPWWVYLCIVGIIFSAY
964ynef1out2|ali|phd|phdHtm|729922.4523MTLWVGILVGVVALLIGVAL
965yqhp1out2|ali|phd|phdHtm|1319927.4452MNHRVQPIIAVLIALGAFGF
966yumb1out2|ali|phd|phdHtm|406333.90390MALNKPKIVILGAGYGGLMT
967yvlc1out2|ali|phd|phdHtm|65494.8855MNKLYRSEKNKKIAGVIGGL
968cotc1out1|ali|phd|phdHtm|118595.7829MKNRLFILICFCVICLFLSF
969spoivfa1out1|ali|phd|phdHtm|264354.0091MSHRADEIRKRLEKRRKQLS
970yabb1out1|ali|phd|phdHtm|247646.0043MVSLHDDERLDYLLAEDMKI
971ybcm1out1|ali|phd|phdHtm|104797.6288MRFLKALPRRAEVQYDCLDR
972yceh1out1|ali|phd|phdHtm|3639310.00266MTTENQNPLVLDKNEEISQQ
973ydal1out1|ali|phd|phdHtm|5699226.89551MLCVMMLLFSAIASFPVSAQ
974ydan1out1|ali|phd|phdHtm|7039146.55692MKQIMIFLTSFMLLAMTGQT
975ydaq1out1|ali|phd|phdHtm|96393.3381MLILIKSYRTLLIIGYFSFF
976ydhh1out1|ali|phd|phdHtm|165272.9129MSSHYKYPLIFTAFLLIAFC
977ydjh1out1|ali|phd|phdHtm|254050.00188MRGFFGKAIFVVLAVFIMMP
978yfhl1out1|ali|phd|phdHtm|110595.7081MTGLVGGGLMIIAGILIKLF
979yhcc1unk1|ali|phd|phdHtm|124090.0018MAIIIAIIAAVIVIAALITF
980yitm1out1|ali|phd|phdHtm|194282.70171MKKAFLVFLSVVLVTTVFLV
981yito1out1|ali|phd|phdHtm|70393.2133MMLNLFRWVCIAILVLVVIG
982yjdj1out1|ali|phd|phdHtm|109696.2995MKGIFLVVQLGFSIMVFLFL
983ynek1out1|ali|phd|phdHtm|1429924.0025MLEGWFLWFILFWVIMMVVL
984yolf1out1|ali|phd|phdHtm|1059914.0023MEYVVMIIILLALFFIFTVF
985yont1out1|ali|phd|phdHtm|589936.2724MLEKMGIVVAFLISLTVLTI
986yopi1out1|ali|phd|phdHtm|177878.0032MNNIGEIISNFEGIIGALLG
987ypjb1out1|ali|phd|phdHtm|2649442.00246MKRKLTICLLIALIFYNGNA
988yqap1out1|ali|phd|phdHtm|3099412.00182MRVREIKNLLDNYNKQIGVS
989yqdb1out1|ali|phd|phdHtm|599921.4331MSTYESLMVMIGFANLIGGI
990yqju1out1|ali|phd|phdHtm|639911.1337MNLSRKHEVKNMNIGDVMFQ
991yrvp1out1|ali|phd|phdHtm|719913.6252MSLYRRTCRRRLLYLRPFFI
992yuec1out1|ali|phd|phdHtm|1519917.00139MLSFSLFIPSAAAAQTEENT
993yukb1out1|ali|phd|phdHtm|291252.00281MLPFGRKGVRHLSLLWVFYQ
994yuna1out1|ali|phd|phdHtm|349030.9539MITDIFKPGCRKLCVFNMKG
995yunb1out1|ali|phd|phdHtm|254040.42202MPRYRGPFRKRGPLPFRYVM
996yusx1out1|ali|phd|phdHtm|500324.00436MNRLSADFQSSLVTLDHKLV
997yxjj1out1|ali|phd|phdHtm|879917.8047MLFIDLEFFEYFLAFYPYNR
998yxze1unk1|ali|phd|phdHtm|66090.0018MIVIILLFISIIVFLSVIQP

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