--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Archaeoglobus fulgidus --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 AF0989 17 in 1 643 7 0 -7.78 26,48,87,119,143,192,287,314,363,387,429,466,490,519,553,583,628 MVNSSKFFSYLIFIASLIYF ISVVVVFLGFRQTKKISMME 2 AF0466 17 out 2 684 1 1 1.82 40,69,105,128,153,193,305,357,380,402,426,474,505,555,592,617,668 MDHSNVSDRVTNLISAAYAL VSALILALLNPVTLKSFRGN 3 AF0636 15 in 1 679 4 1 -4.84 47,76,106,135,158,209,326,387,459,483,511,553,595,621,663 MVLMGEAEVDVTELEKKFLH LVVFTIIFLKQQYSLHNEVV 4 AF1826 15 out 44 649 2 0 2.06 31,64,113,149,171,227,262,299,336,392,437,473,518,552,645 MSEMVELPMMAELLALLFFT QIVIGFVMLIVVVAVAAGWI 5 AF1825 14 in 8 487 4 1 -4.17 21,48,91,148,171,196,222,261,291,317,346,390,427,468 MTAEILVFSLIIPLVVAFIL PLSTALLSGLKVVLGIGGVM 6 AF2258 13 in 6 503 3 0 -3.97 32,70,97,123,163,185,219,248,290,321,349,378,480 MSDDDQSVLKAWIAFLPVSA LFLHGDEHVRRARAARKGVV 7 AF0839 13 in 3 478 5 0 -5.16 28,52,95,151,201,223,254,289,311,339,412,434,468 MNLRLTASILGKLLMLFSFS GRLEIFTVVSLFIPTFWRER 8 AF0582 13 in 1 440 1 0 -1.62 18,62,99,150,176,204,259,298,327,363,393,415,437 MYTLIYAVCFYTSSLLLTTP VAVESRMNTVFKFYIYAWLR 9 AF0969 13 in 1 531 6 0 -6.01 26,90,145,169,202,254,293,364,410,433,463,485,511 MAQVEAPVIGITVLYFLAII ITKPVEEEAVQKYCVELTKE 10 AF1069 13 in 1 491 4 0 -4.60 20,58,88,136,172,203,263,302,350,372,412,452,479 MIIEAVLIGYLAVVLLIGIY VSIAVFAAFSLAFPQPSKAE 11 AF1827 13 in 1 404 1 1 -1.68 21,50,85,108,146,168,208,236,269,291,332,361,394 MDSMIELLASLIILAVGAAL MLITLIPPMWFVDVVSMMKG 12 AF0806 13 out 5 544 4 0 4.09 21,45,75,115,144,215,249,272,320,372,405,448,539 MDAIVAATPILLVLFLMAGL YAIVVSVVAAIAVFILKIQM 13 AF1144 13 out 4 451 2 2 2.42 28,61,100,122,155,179,226,275,309,335,363,406,440 MQLKKAALLTSGVASFLTPF FAALCFVGIFASLGRGKIKR 14 AF1538 13 out 2 486 5 0 5.06 44,91,137,174,228,298,327,353,381,403,425,457,481 MEDGRYSALERMGARLCASV TISVMILATIPLSLGLVLVP 15 AF0015 13 out 1 491 7 2 7.73 23,66,91,153,179,201,248,294,336,393,415,440,471 MADTITVSIVLAYFVVTLAL LITKGAALDDMDEDIRAAMS 16 AF1995 12 in 20 491 6 0 -6.43 36,61,111,168,197,243,281,333,380,406,450,482 MAMERENWATRAGFVLAAIG SIIVLGMIVAAILSWRDKNV 17 AF1612 12 in 4 736 8 0 -8.04 35,58,111,147,176,215,254,306,352,375,417,441 MQVQVSLSRDLSFFDITMIG VVMKTSKTVAMTRKWVGLLN 18 AF1140 12 in 2 439 9 1 -13.72 64,86,123,156,185,212,284,306,343,370,398,427 MIYREMNYQNMKRNPQISHE IISSVLTLLAMTALFEKLRR 19 AF1471 12 in 2 447 9 2 -13.64 45,73,112,148,190,212,256,294,339,375,403,432 MKNVEVLTGDPKKAILKLSA FTGFSWVRLTVRRLERCLLS 20 AF1774 12 in 2 531 9 1 -11.96 32,56,102,136,165,197,236,281,331,353,386,408 MREKIGFWEAVSIGIGGMIG FEKKSLRDEALKRAVSYRRL 21 AF0008 12 in 1 420 2 2 -2.88 32,61,93,127,163,186,243,276,319,343,374,399 MVERRLVYPVSAAILAMFAM LAGRKYAGGGVNVQVREPEG 22 AF0013 12 in 1 399 8 2 -8.13 30,66,95,117,161,183,229,261,296,326,357,386 MGENSKFLPWMVATGAMLAF FIAIGGMILILLMKPPQKVS 23 AF0367 12 in 1 397 9 2 -11.32 27,57,92,116,149,179,240,269,311,333,364,388 MASKWLVIFAGFLLNLMLGI FLVAGVLALIAAFMSFLLRR 24 AF0392 12 in 1 484 9 0 -9.10 61,89,137,163,207,256,325,347,386,408,447,470 MKVLRRLSPLYELSDLIFVE LAVLAVFALLNRRKAKLPFR 25 AF0907 12 in 1 419 9 1 -14.70 42,74,117,139,170,199,240,282,313,345,379,413 MKKVHIFLRLRTQVGASRYR SFCLAASVVSAVLILFVHEK 26 AF1205 12 in 1 474 9 1 -9.01 51,84,127,160,187,234,277,322,344,383,416,454 MYFLVTTLGVGFYLMKRMEK LNAVLPGKPGLFREKALAVR 27 AF2294 12 in 1 388 9 1 -14.44 28,63,97,119,147,183,223,258,297,319,346,371 MVQMRALLTAGFILIVFASQ AFILTLLLPNDRKKPSISKV 28 AF0237 12 out 1 461 9 0 9.51 25,70,92,145,175,201,247,286,339,378,430,453 MVKLIEFLYAFIGYIIIGTA VWTFIISFAVFLALSSSEKQ 29 AF2192 11 in 9 503 2 2 -2.37 54,104,133,181,207,261,297,328,357,382,491 MEPGFLLLATSFVATFSAFS SALMLLGALLRFSGKVFKLG 30 AF0025 11 in 1 393 5 3 -5.28 30,66,93,117,151,179,247,285,318,359,383 MEYSGYRWVVLGLAWLLFGT VAAIFFAAQGIFAVLIPEPP 31 AF0251 11 in 1 394 2 1 -2.58 29,51,81,125,155,177,226,268,304,337,374 MDFTKEKFQLLAISSLTLPW ILFAKRKEIVESFRTVKRLI 32 AF1222 11 in 1 479 6 2 -6.16 37,67,120,149,178,244,284,334,396,418,466 MADFVAASGQLGFWTYCLLM VLPGFVASFVLAVGVSLLEK 33 AF1734 11 in 1 614 7 1 -7.97 115,297,336,363,403,447,503,525,565,588,610 MPNQIHLNNSTSYLSVISQN ALMLAAILHAIYDHTVVMLL 34 AF1746 11 out 18 468 9 0 9.61 58,93,141,167,213,255,285,308,335,372,420 MVGRMCVAVLIVLLLVATAG YPNFVCTETELPLAMKQGGG 35 AF1902 11 out 10 493 3 0 3.44 50,91,134,170,197,226,264,310,385,449,471 MDSVIRALQPYFERIPSVER LAKEQLTEMHPLIRRMLGEE 36 AF2308 11 out 8 397 0 2 0.93 18,43,69,117,146,189,242,280,315,358,394 MIELLISILTYALISLQSFY KAGVPVTFATVLVGALLIYI 37 AF0846 11 out 4 494 0 1 0.95 39,71,100,126,172,200,241,288,318,344,368 MIEENLVEFIEILMLATAVA SQEVALEIMRELDSKTAELM 38 AF0706 11 out 3 403 6 0 6.33 30,81,113,135,163,186,224,284,353,375,402 MHPALVLAAIALIAIKLDPR VNFLGTLSAGIICVLLLLPL 39 AF0787 11 out 2 358 7 3 7.06 31,59,98,124,146,172,213,261,285,317,356 MAVQHHMQEDPLIAAGLFII RIGVPLGLIMMTIFFVIIYV 40 AF2040 11 out 2 396 3 0 3.48 22,57,113,135,173,201,243,279,321,362,393 MLTDTLLGTLLGFIAGLIPG RRANCMGCLIIPVLLYYLPP 41 AF0261 11 out 1 405 2 0 2.11 44,87,132,171,202,245,288,323,361,383,405 MMKVLNSGEQNFVPMVASSS RQLLAIAGITAALVWIAYLV 42 AF0380 11 out 1 868 1 0 1.81 31,102,126,152,228,268,291,338,394,434,486 MQNAESWFKKYWHLSVLVIA VKEITIYESQVQNGEIIQLD 43 AF2014 11 out 1 401 6 0 6.45 31,64,114,167,189,232,272,310,332,355,384 MGEFSKFEKLIVLLAAAIGW LLMCIFPWLLPETKGRELEE 44 AF0791 10 in 4 314 7 3 -7.58 20,53,89,112,143,177,214,256,279,306 MDVTIALVAALAIAFAIGSN TPFTAFTLSFILTLLLSQQA 45 AF1392 10 in 4 312 0 1 -0.92 40,71,93,123,170,192,220,249,271,296 MDTISSFEIVKNIIEGSLIY TLILAPKGLTGVKWRRLLWS 46 AF0475 10 in 3 370 9 3 -12.19 54,85,125,151,189,225,265,298,332,357 MSRIDDIERDIKKAEKVVEH VPVLIMLVNVALKLRDKLYK 47 AF0753 10 in 3 488 0 0 -0.60 23,71,102,143,176,213,279,304,327,354 MRRTLPVIVLLIIASLIRLY LAFREPLTDVSCMNFSVYRA 48 AF0347 10 in 2 319 5 2 -5.92 41,63,91,116,152,181,213,251,283,308 MSLKEFKIGWFATILGTGGV FLIAAWAIIGVRTVGIAIRG 49 AF2084 10 in 2 354 9 2 -9.30 21,45,74,115,158,216,253,282,309,354 MLGSLVMIGVGLLLVYLGIV PNVAGVIGSAVAAGVLIQIL 50 AF0127 10 in 1 475 9 0 -11.03 42,66,110,143,217,262,301,342,391,429 MGGSFATGGSAMTPDMFIHI AQSGYEGIDAWASEVKAGVG 51 AF0143 10 in 1 469 7 1 -7.69 52,83,146,168,291,340,362,391,431,468 MVGFAALLYDGSGGGEIRFR TAVYSVPHLIAALTLIKIIA 52 AF0174 10 in 1 407 9 2 -14.11 23,60,97,142,196,227,263,306,335,393 MKFKALVAVLVALAALGMAA LSLVLLTLLKALPLKDVGEK 53 AF0217 10 in 1 377 0 2 -0.64 28,51,75,118,162,187,230,310,342,364 MSEVEQFATIALISLTAFIS SCLLSPTLFRFLYPRYLPKT 54 AF0225 10 in 1 338 9 1 -15.86 57,79,105,132,154,194,246,279,301,326 MVRVRDASNDRGDSNCQANG IAVGILMPEGLYHKVKVNKQ 55 AF0500 10 in 1 395 8 3 -8.33 33,73,109,145,185,213,246,294,323,379 MAVEFKKIEGDSIQYFALVI VVGVKLFALIPERAVEEVVE 56 AF1508 10 in 1 480 9 1 -13.71 42,66,112,143,220,262,301,342,392,436 MGGAFAQGGSAMTPDMFIHI GLEAWIDYMEREFGKDKWPV 57 AF1552 10 in 1 270 9 0 -11.69 28,53,94,116,145,167,195,217,246,268 MVWFRCMRYGEAAIVLSAVL TLTQLIGGAMILAGVLIAWR 58 AF1749 10 out 20 388 7 2 7.93 26,60,107,133,169,207,234,277,322,358 MQSGDISWLLISTALVVLMT VSSQEEYVGLDLSQHEEVAY 59 AF0977 10 out 18 391 5 2 5.61 26,60,106,134,169,206,235,284,322,362 MSDGNVAWILASTALVMLMV VSSQEEYVGLDLSQHEEVAY 60 AF0329 10 out 1 591 9 0 11.61 106,135,177,199,237,273,296,334,363,427 MDRKVLMLAVILFALAVRFQ LTHFRLVKEFGDVKIFEVVG 61 AF0459 10 out 1 736 0 0 0.27 40,242,264,326,350,407,595,618,640,716 MNVQKVFYRDSESLLMLPVE AVPALLILYEKNYFREILKM 62 AF1229 10 out 1 750 0 0 0.41 35,221,248,318,349,408,603,625,648,724 MFAELLDRVARFIARRPGFV MLTEGIEARISAAINNIKNT 63 AF1325 10 out 1 371 0 1 0.47 27,49,90,112,163,215,249,271,297,354 MLRLILSGFFAYASLSCVIP TLLFSPISLSKGFGSISEVE 64 AF1533 10 out 1 278 9 0 12.66 23,52,77,120,142,167,189,225,249,271 MLEILMSLTAAICWAFNGIA LVAGIFVIILAILLLLLPPL 65 AF2247 10 out 1 349 0 3 0.46 39,80,114,137,183,205,245,281,318,344 MDVNALLLAGIQALEEYIAL YIITIVALSTIAGVVYGEVI 66 AF2296 10 out 1 362 9 3 9.57 32,83,112,147,192,228,271,293,324,348 MRMSEVGFFGLGFAVLLHII VFLTAAFYALFKRYLTEVPE