--- -------------------------------------------------------------------------------- --- --- All proteins with at least 7 transmembrane helices in Archaeoglobus fulgidus --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 67 AF1831 9 in 65 369 6 1 -6.85 58,80,140,169,211,243,296,329,367 MVVMIADALNYFYEIFSSNM SMLALSIVALVVGGALGVWL 68 AF0431 9 in 18 334 2 3 -2.25 28,72,103,141,169,215,264,303,327 MTEYRRRIRVAELLLLSLLI GIVTAFVGAPMFIFLLLRGW 69 AF1402 9 in 18 328 1 2 -1.74 30,79,119,141,167,211,259,297,321 MTNSFDFVKGKVVAALLALN GAITAMLGGPFFLYLLMRRS 70 AF1621 9 in 17 328 9 0 -12.36 58,120,150,182,204,239,262,292,324 MRETVKLIEVARELPVSRKN SYAGWAVGVAFVLLLLGSGA 71 AF0266 9 in 7 276 7 3 -7.85 25,50,84,107,132,155,189,220,260 MKKWIVLALTVTFWGLAFTA LRTVAGSGLVLLGIYIVVRK 72 AF1798 9 in 7 333 6 2 -6.18 21,58,99,122,162,196,233,278,328 MDLFIVVAGIVGFYVAWNIG VTVPVAAAMTISLYTMMVVF 73 AF0510 9 in 5 289 9 3 -10.42 28,52,88,110,137,166,199,227,269 MNSKTHLLLALTMLIWAGSF TAIGGIITIAGVYLTTAKQH 74 AF0040 9 in 1 593 4 1 -4.36 109,145,172,200,246,281,340,369,429 MTPVGMDRKSLSLLILIVLL TNLTHFRLLKNFGTVKIFEV 75 AF0208 9 in 1 481 3 0 -3.55 26,52,85,119,150,183,207,240,293 MSIYAVGLLLSLFELTLFTV KPHGATFVIRLKAARVKLSE 76 AF0788 9 in 1 308 9 0 -10.74 64,88,113,140,170,192,221,248,294 MGEDRRSLRVDYDDNFLRNN PVQYFGAFLILLAVIIVSLR 77 AF0995 9 in 1 651 9 1 -11.23 75,122,276,305,385,421,566,619,648 MFKEANRLTYIGYRLFAEDI SLIMLTIAYIVFSVLFGFKL 78 AF1245 9 in 1 338 3 3 -3.95 29,64,111,156,180,227,264,286,331 MELAVIVFAAAIAAIISRML ATTLAAVVLFTSIAGSLIAK 79 AF2131 9 in 1 329 5 2 -5.17 24,53,114,144,185,217,246,284,327 MWKRNLLLLILLHIGAFLFP FWVNAAIVGIGIFFVIRILT 80 AF1541 9 out 6 372 4 3 4.11 54,99,169,227,252,285,307,339,363 MNRAMKFILLMGLVSLFGDI VGFVLVVEVAAFATLLMLGR 81 AF1691 9 out 4 267 2 1 2.04 18,47,76,105,127,154,184,211,248 MNYLVLLIPVLFSFHQIFVR FTLRSITGTLLILGGIYVYY 82 AF0692 9 out 2 313 9 0 11.48 21,58,80,116,160,182,217,244,295 MKALYWLLIGFLSSTLAEVL LAGTAYGTIVFASILIKFLM 83 AF2297 9 out 2 535 2 1 2.39 39,79,121,149,202,246,286,423,519 MSGGETIIDASWLLGLSALG VSMYFVATRGYRYLFRGDEN 84 AF0158 9 out 1 361 9 3 9.60 47,71,126,185,212,251,283,308,351 MLWSYPEGFAYFNEFAQSII AILLLVILSYIFPMEVEEDA 85 AF0888 9 out 1 332 2 1 2.88 29,73,96,122,149,199,253,291,322 MRDIVTPVISVAASLVLVGI YVFQSLIVLFIIGGQSLRRR 86 AF0889 9 out 1 310 9 2 10.08 53,90,112,140,162,212,240,262,287 MVDPSFLASLLASSIRAGTP KRAAFGAPAALGIPYVRGRK 87 AF1393 9 out 1 449 8 2 8.37 129,160,215,252,290,343,370,393,423 MVSFRRFGCDGGVSAAIQVR GLIKEKPIFSKVILKKVKGK 88 AF1632 9 out 1 334 4 3 4.05 32,67,96,138,166,232,259,288,324 MASEAVNVWSRTSLILIMLS IALSGVVNIIQGLSGIGLLN 89 AF2309 9 out 1 537 2 0 2.94 82,154,230,271,300,343,370,415,457 MEGAFLNFSRPTFSTTNPAV LNYQPSLEPLPSIPEDLNKG 90 AF0473 8 in 41 804 9 0 -10.34 119,143,177,203,360,392,696,718 MVKDTYISSASKTPPMERTV EDVDKYIKAVEAAGYQAKLR 91 AF2394 8 in 6 563 5 1 -5.00 222,280,360,384,444,495,526,558 MVGNPNVGKTSLLNALTGGD IFSFSVAYVIALIATGVGLW 92 AF0824 8 in 4 323 0 2 -0.73 24,48,83,118,176,227,261,298 MNWKFVYPVILILAVLLPLT YYSRKAEKGEKLPKRALVGK 93 AF1820 8 in 3 791 9 0 -11.39 59,292,347,424,462,676,731,771 MERLRGLRGISIRLTPMKSS LPSARRVSEMDIAKVTKEIV 94 AF0246 8 in 2 639 5 0 -5.14 302,369,446,470,533,562,602,634 MECHSVKAETVTAEKKVALV LLSVAIAFTAGYATAVMMGV 95 AF1344 8 in 2 292 9 0 -10.15 41,77,106,135,186,227,258,282 MEAKDWLAVVAKLRREFLKI PMVVFFEISLLFVRIFARPK 96 AF0124 8 in 1 289 1 1 -1.69 33,60,91,126,192,215,244,278 MEYVMWMVLLFAFTFLIGII GIMLFAAILDIEKGLAGLGV 97 AF0658 8 in 1 614 9 1 -10.87 63,109,262,290,374,396,542,612 MSLYTPLALRRFYRKRYIRR GLKHIFILVVVVYVFFKFVI 98 AF1619 8 in 1 319 8 3 -8.46 41,88,118,158,190,221,264,308 MAEERRIDWSSLWKKEDWWA WMGLAVKTDGAATASVKWLK 99 AF2401 8 in 1 348 5 1 -5.05 24,75,110,142,169,201,227,297 MRLNKLISGLGLAFAIYFFL REKVVERIRAEVMREVKDFN 100 AF2386 8 out 4 305 8 6 8.40 38,74,115,154,186,224,259,294 MLILNPQHYYLLQQPWWGIL GGALLRYVVLEAGILQIPCC 101 AF2276 8 out 3 295 2 2 2.12 35,75,126,148,189,223,254,292 MIESAVGKAAYSTAAFLIKS LLNSIVTLILDIFFVVLLLL 102 AF0771 8 out 1 289 6 2 6.09 30,52,100,123,170,227,250,285 MIFEIIKIGSQPINFAYPIP LKIYTYSYLGFLIAFAIGCK 103 AF1159 8 out 1 676 7 1 7.77 366,404,468,507,558,582,606,632 MLKPERMVRVSVVGPREKLG FFEGGGRLYEPFGRIKRFIE 104 AF1223 8 out 1 275 6 3 6.02 31,81,123,156,183,210,241,263 MLNYLLLFTAVLAVSSAAIF YMFVILSGIALTFFKQGNPD 105 AF1648 8 out 1 303 1 4 1.07 41,64,134,169,191,241,263,299 MDSSLANINQIDVPSKYLRL PFGIISALFIAYGFAVISVL 106 AF1688 8 out 1 274 6 0 6.33 29,55,87,120,169,207,240,270 MPEIPLLPFIAAFIIGLICS LSLLIIGISAKYILESVSLI 107 AF2018 8 out 1 244 5 3 5.65 28,60,98,120,152,181,205,239 MNEATIVAMFLLTLVAFTVR LSAVVLLSLVVILRYGGGLI 108 AF0152 7 in 34 690 7 0 -7.11 81,110,146,168,326,356,670 MHEHDSHGEAAHSNSEDMQM VGAILMSLSTVIVAINARLL 109 AF0093 7 in 16 261 1 1 -1.52 26,75,109,143,196,218,247 MRLLFSALLALLSSIILLFV LAVFVALRIIVGREDVSEGQ 110 AF0661 7 in 13 379 0 0 -0.18 128,171,219,255,291,325,354 MEVDAQFVRDVIGFGGKTLR HLLYRTLAYTWAKSVGREPQ 111 AF1606 7 in 11 242 5 0 -5.33 25,72,108,130,182,204,233 MILRAFTIAVFAFLYIPIVI LMIVISLLLSYIYVRITVSE 112 AF0224 7 in 4 284 4 3 -4.64 42,71,106,153,203,242,277 MIETLVKIAVFGAVVGGIWG MLLTIVAILIVKPTGLFGVE 113 AF2132 7 in 3 244 4 5 -4.56 28,55,108,137,176,213,241 MNKGKFALLFTFAACFAVIV ILLHLSIPLVNSFVAVKILM 114 AF0042 7 in 2 254 2 2 -2.73 58,81,131,159,188,215,240 MGMSGYLRKRDVIITMTQFE ALTFAGQLFFRRMQKRFGEV 115 AF0825 7 in 2 297 0 3 -0.45 38,83,117,165,218,247,287 MMIEINYFMNLLLGGLVVGF ILVAILILKPEGLFGKKERR 116 AF0960 7 in 2 285 9 1 -9.42 36,85,115,157,206,245,272 MVALKAELLLLALLILLPAT LYAAVLILSPKLSRWWNAQS 117 AF1005 7 in 2 366 1 2 -1.96 42,184,236,265,296,320,350 MLEKVYAVFLKELKVVFRER LISVLAAITVLRKVMGGGSH 118 AF1883 7 in 2 251 4 3 -4.49 40,74,133,162,191,213,242 MRAFEIMVYRQIKRFLRARS LSLTALMLYVAMVSFERSTV 119 AF0360 7 in 1 232 9 4 -13.51 34,59,110,135,166,188,231 MRDYIFPPLILPLFLLLIFL GTFDGIFLTGIFAVIFSVLF 120 AF0404 7 in 1 293 7 3 -7.68 41,63,123,170,233,258,293 MRRVSMRSLKRYLKAIWDLL YRKVTLVAMVLGLVGFFAGA 121 AF0524 7 in 1 225 9 3 -16.07 28,58,103,132,155,177,217 MRYPEIDIARGAAVILMLLF QHPVIILLLHLYFGDILQQI 122 AF0961 7 in 1 241 5 0 -5.72 24,60,98,144,193,217,239 MAGMISAVFTAIFLSFFASA RKYAATFPIALAYSILVGWL 123 AF1048 7 in 1 541 9 0 -16.73 175,203,249,284,435,495,527 MEVKTAKVPKLSLGFGRFGK LLMLVVPPVVKWAFTLPSFV 124 AF1421 7 in 1 880 9 1 -13.61 38,80,118,170,213,258,289 MQEPPVYPPPYKPPEMKVFY DWETFGEMLKKIGEVLGYEG 125 AF1505 7 in 1 336 1 2 -1.62 63,96,141,163,264,297,336 MIPGLMGLRGNVFGSLGSRI TTTLTDIVGTTAVVVLAYLI 126 AF2036 7 in 1 281 3 2 -3.28 44,111,140,172,230,252,280 MEKLKALIEVTKPKQTFLLM YKLASMTLGLVYFSLLLGVF 127 AF2133 7 in 1 286 9 2 -12.12 76,103,136,175,197,224,272 MLIALLLISYQLIKHGYRAA TSLGLLIASFMERGEISPNM 128 AF1981 7 out 8 264 0 5 0.27 32,69,110,152,194,223,255 MITMDELILRALIASVLISL PSGAVAAAIASSIYFAVSWR 129 AF0639 7 out 7 248 4 2 4.35 21,76,109,136,189,211,233 MRLKGAFVLIFSWYLISALT IIGYMMNWLLLRAERWVMPW 130 AF0154 7 out 5 277 9 1 13.66 31,59,92,131,165,191,264 MLKMMGQMVITLREGFEAAL LAAMLGLIHRSYGRVTERAE 131 AF1843 7 out 4 273 8 0 8.46 35,70,98,130,175,204,265 MLGYSIYRLRGQKLTSLFGI IVGTVIVLALGFALTRYART 132 AF0289 7 out 3 252 2 2 2.18 51,76,127,156,186,208,240 MFGYLKYRDVILTLTKYEFK GILLIGHAIFKKLEKGFVER 133 AF0462 7 out 3 276 8 1 8.52 54,83,118,140,169,206,240 MVKLFNQLLIFPMDLWEFIK VLVVLGLAPGLRDGIRMMFG 134 AF1248 7 out 3 228 8 1 8.87 22,53,75,115,158,180,223 MITGTLINALTVVFASLLGL NMLPALIFAPLIVAVLQLTG 135 AF1561 7 out 3 285 0 0 0.26 38,66,113,187,209,248,276 MLETAAWWVWPVILFVFTFF VIAVLIFAGLRSLLKGLGIW 136 AF1569 7 out 2 259 4 3 4.33 39,83,105,144,167,215,247 MLRKKLLKILSVLTLFIFFQ IVVVCILTLGSWLGLKVHKK 137 AF2110 7 out 2 241 9 4 18.92 25,48,70,105,140,186,221 MQNELLWFALLFASFVGIIL VYIAKMIKSEADRAEVVSKV 138 AF1525 7 out 1 285 6 4 6.98 22,79,122,186,215,244,275 MYSAVFIFLFSLLIGILAPL LIILLIAASTNIYKGLTGVF 139 AF1800 7 out 1 340 9 3 10.30 36,76,161,210,239,280,319 MNKYWTLVLLLSILVVLALT AIYNYYTKEELATENHDPES 140 AF2046 7 out 1 248 1 3 1.57 26,66,100,122,156,193,229 MLAEVISAVSLIPMLVYVKT LLPELADLIYSLKDELVGGG 141 AF2125 7 out 1 325 7 2 7.50 31,111,140,228,257,282,316 MNALMVFLWFIWVGWIFSTV LALYVGTRYVLSAFFGIKLP 142 AF2176 7 out 1 291 3 4 3.34 46,105,127,152,179,231,284 MQRIKMYLDFIKIEHTLFAL ALVSSALLAAIFADAIFSKL