--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in Archaeoglobus fulgidus --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 143 AF1426 6 in 46 246 1 4 -1.65 29,75,118,163,193,239 MTMTLAKRFTAEVVGTFILV VIGPIVGAVAAAWLYNYLAK 144 AF0232 6 in 33 224 0 1 -0.64 40,79,107,148,170,209 MAAINQFDIDLFIRILPDLA TIPLSRLVAYSQKKLGTYQV 145 AF1415 6 in 17 589 2 1 -2.10 33,83,186,220,263,303 MKRRAPLSSKYLILLAAIVG GIITRSDIMKAHAREVKRIV 146 AF1768 6 in 17 354 9 5 -9.34 48,139,179,239,298,344 MPLFPSDKFLSQTPQTYPMS VALISLVVDVIYALLDPRIR 147 AF1769 6 in 17 286 9 3 -11.26 43,106,146,168,221,270 MAEVRNLATTIFSFLPEAEG SLGFALVGEGLSEIYAPRRE 148 AF0332 6 in 16 362 0 1 -0.86 32,65,95,137,159,211 MRASFKIFRVFGIDVEVHIS MRIKEILEALEVMGWRKRGS 149 AF1358 6 in 11 283 9 4 -12.83 35,86,128,153,204,271 MKADEIKEGLFMLLALAATV IMLSMNAFAVYLRNKFARRL 150 AF0086 6 in 10 244 9 2 -10.63 29,77,120,142,187,229 MQASKADYKGYLITLASLLL LLGFALYVIVESAERRVCRW 151 AF1357 6 in 9 297 9 4 -13.49 35,91,132,160,210,286 MAKASDKIVYVLLLFSALIT MTMLLNTVSYAIKMRFREVY 152 AF1607 6 in 9 248 9 7 -10.11 25,72,110,139,189,239 MKKLSLPSIIFLLAFFYIPF YLAVVFAFTAYYIKRAGRLE 153 AF2231 6 in 4 328 8 3 -8.56 18,48,148,242,291,314 MIGILVSIAVTAIIFKYTES FGAISVNYSLIKSKFVKNQL 154 AF1512 6 in 3 250 6 5 -6.26 46,89,134,174,203,227 MSGPPEDRELELREHIEELR LRILSGKDEKGILTNREAES 155 AF2388 6 in 3 384 9 1 -10.49 31,56,94,126,165,187 MDEALRAGKISAFANVVLTA ILVKVIDSGLRDVEDVLMAV 156 AF1137 6 in 2 297 9 1 -13.42 41,72,121,161,192,290 MKALIIAKKEFADIVTSKRF FVILPLLLFTLSYVRFTREE 157 AF0546 6 in 1 244 9 0 -12.20 42,71,103,132,169,228 MGQRKKCVGGEKAMAGELAW HPIAIFFGQKVILDERHIYP 158 AF0581 6 in 1 581 9 1 -13.01 312,340,427,450,506,553 MPSSPPHPSPKDAWTATQTS VLLGLLSLASLNLSLKEVEQ 159 AF0863 6 in 1 297 4 5 -4.83 49,107,152,199,242,277 MSEMESDILRAGWEAWRRNP TCWWVELYRRRSKTLNSFPN 160 AF0983 6 in 1 228 1 5 -1.50 56,79,133,155,196,219 MDSSFTMEVALKELWRPLMR FVVAYDGIIATLSMITADRV 161 AF1011 6 in 1 330 9 2 -22.73 155,194,230,259,288,311 MLLHSFSRFKLLRGFLSLAA AVGLYYGKRLGRRKVRYDFY 162 AF1781 6 in 1 444 5 1 -5.74 30,127,256,289,320,363 MPSLRDAMKLSPLFVLLLAL RVRKIGGGGTEKGDAEVAGE 163 AF2058 6 in 1 344 9 2 -11.25 180,202,241,276,309,337 MPKKLVLVIDRDDDLGQKAG AGAIVGAILIAAIGVFTLKR 164 AF2102 6 in 1 217 9 0 -10.96 18,59,98,143,165,204 MLLIYGIFAFVVLVFFYLLG TLLLSAGLLAVSFLLALQLK 165 AF2111 6 out 11 213 8 6 8.51 30,69,91,138,168,203 MDIAGYLSFFFASFTTLFII AAIAVEFVFDGLAEKLVSMD 166 AF0925 6 out 6 315 1 1 1.45 27,70,92,183,215,287 MLESWATSSLILFVAILVVI IPQTHPPLRYRILLAHQTLK 167 AF1755 6 out 5 219 7 4 7.59 38,68,90,146,174,209 MHSLSKSAMFRKGLVYSFPI TSVGIIAAALAGPLLSGWDG 168 AF1057 6 out 4 190 8 5 8.26 24,49,75,126,159,182 MLMAFALGILSVFSPCVLPV KVTGAIVLLYLAYFALTEVL 169 AF0210 6 out 3 498 3 0 3.58 42,71,103,132,154,494 MRSVEALYYKLFSIPRAEIM ATFLAFAATNYLLSTMLRFI 170 AF1579 6 out 3 197 0 4 0.68 23,46,76,114,136,180 MRDKLNLLIFFIAALLIALG VRTFLFFSPFPLFLDMSWSS 171 AF1434 6 out 2 199 1 2 1.11 39,68,90,121,150,184 MQPIELAELLTSQAAVLTSL LVLTGIITQYVTYKEEREEE 172 AF2236 6 out 2 211 7 5 7.54 36,78,101,141,172,209 MPTQAANEALAILRDASQFQ FGILAIDAVLLIVFAGLMEW 173 AF0053 6 out 1 235 6 4 6.38 49,82,106,136,187,232 MFSLAIMFVLGSHEMGHYFA VGVIAFILALLCFTPVPFYV 174 AF0728 6 out 1 218 3 5 3.55 30,62,96,129,155,199 MMHIMEGYLPPEWAAFWYVF AVMLVSYIFEVRSDVLEVVK 175 AF1322 6 out 1 501 1 0 1.18 90,135,162,211,437,495 MSTELESIAYALIAFGAYWG AFIVFFSILMSIAIPNIRGL 176 AF1460 6 out 1 227 7 2 7.05 34,74,112,152,190,219 MPPPMIPPKLPPLEFIAAEA AIYTLSVAVILIIAYRVLRK 177 AF1499 6 out 1 234 7 5 7.63 20,60,91,148,186,214 MAALLFYISAIFVPEAIWLL ALAFRRGGILQTAISRGFNL 178 AF2202 6 out 1 228 9 0 10.66 23,67,89,139,193,216 MEDLKTFLSFLLIIIGLLTY LLIVALMALRLFYNAGIPDK 179 AF0793 5 in 2 207 9 6 -10.69 41,95,130,167,196 MEVITNPDSFLRKRLERGFG FTGYFLLTASSLIFSSLSET 180 AF1169 5 in 2 206 1 1 -1.60 26,65,102,141,185 MVNDIKKTALAVVTALITAV LAVLVFRYVHRMLNERGVEV 181 AF1952 5 in 2 238 2 4 -2.71 50,79,117,207,238 MPKYEEAGMVVFENPSDVSN PGLPFVNFGAIAGYILGSVL 182 AF0172 5 in 1 217 4 8 -4.75 42,79,123,172,212 MRLLPKMGGVISIWLTSTLL LLFLNLLFVVGFLALDFAGL 183 AF0263 5 in 1 490 0 0 -0.93 83,119,349,410,481 MILPCESFNGVPSGCLIIEM FVAAISLTRVVVTLLAVLVS 184 AF0303 5 in 1 397 1 1 -1.32 50,80,109,148,184 MFFVHFWVLSKPPFYSPNPE PGPNNDSRWDWAWWGEPRIE 185 AF0785 5 in 1 342 3 3 -3.84 159,202,242,272,341 MEVRVSGRSDSYGRHRTGND RSLIALTLLLIALLFLSILA 186 AF0936 5 in 1 240 9 4 -12.60 52,74,102,134,234 MLDLAKFLVVLGFLLYACKL YIVAFILGDLLYLLISTILS 187 AF1317 5 in 1 340 9 1 -11.40 129,226,270,293,333 MVPMMDKIYIDKINEIEKRM MIVVPILKALGLVSLITRMI 188 AF1584 5 in 1 146 9 2 -18.29 32,54,79,104,143 MVRRGAMVLLTMLILYAAPS LVVAITFTILSVFMLFLRGV 189 AF1842 5 in 1 243 1 1 -1.75 65,99,133,160,243 MHELLERTIKEASSYFQNFL KMLDFVYAVIVGFTAFWWVI 190 AF2323 5 in 1 231 3 1 -3.12 56,121,143,188,231 MIKAIRSAISFLTTLPLGGD GSANCLTFAASLSALTIAGQ 191 AF1980 5 out 15 218 9 3 11.14 65,100,131,164,201 MWSKASALCFFSGFAMLVYG FFLLDSKISEIREKLEVMEN 192 AF0980 5 out 11 218 9 6 10.44 46,80,102,162,199 MTDGSFLTTLIEIWELHRLT LDAFAGAVERVLSRKFRGEY 193 AF0235 5 out 9 335 6 3 6.95 28,60,88,197,231 MMLYFFDPVYMMLAVLGYFV FLSTHPPLPKRLRFIESIRV 194 AF1703 5 out 8 208 1 3 1.25 27,58,107,153,195 MIFSFIFKVAVISSSGALAP VFLFGVDFLHYGLFSKHLLP 195 AF0979 5 out 7 204 9 3 10.44 35,78,100,150,186 MIELLKVLAATYEHLLLTYG VFIDVSFTKIEGRFGSDNSS 196 AF2166 5 out 7 154 6 5 6.68 21,44,69,108,142 MLFIFYIPYYPGLGDFSFII STLVVAIFFVPHFCGMPPYR 197 AF0039 5 out 4 369 0 1 0.42 145,237,271,313,353 MKVSIVLPTKDEQNSIEKVV IAISSIFLSMFLLKEEKDNN 198 AF0328 5 out 3 371 6 1 6.19 141,238,268,318,354 MITVVLPTKNEEKAIEEIVK SLFLSMFLLNESNGEKVILK 199 AF0755 5 out 3 654 9 1 16.81 36,100,139,177,222 MVEPTRELLWGVEELHVTVH DKQMAVMDVTELVYAAVYGE 200 AF1302 5 out 3 188 9 1 10.06 45,91,119,141,171 MTYVMLLDMWSMSLKYTIVT VVAEISMLRARRTGLVLKLS 201 AF1336 5 out 3 290 0 2 0.27 75,97,162,211,286 MGIEVVVLLTTLMLDAAVGE AVIFTTIAVSIRIVLLTKLH 202 AF0153 5 out 1 202 5 4 5.81 29,63,95,153,177 MALLFMDPLDLWLMLLGVTL FGHVAGWGNWVPWYGSVTVG 203 AF0331 5 out 1 396 3 1 3.66 78,259,281,313,375 MEEKRLVIVGTAHVSKRSVE FGVDVAKVVGERVVEVIGGL 204 AF0501 5 out 1 332 9 3 13.80 23,122,164,197,253 MIGVIFGVIVPYIAVAIFVI MYTDQLQEIEEADYKIVPEE 205 AF0545 5 out 1 308 9 4 10.26 23,120,148,186,230 MIWVQAIAYFGIAVFFLVVS EATAIEPVLEVRALAERRKR 206 AF0730 5 out 1 240 4 3 4.27 44,85,123,154,240 MHETLEEAQVKSRKVVDGHL NRGVGVAIAVLASLCLAGWL 207 AF1171 5 out 1 217 0 0 0.00 44,88,110,134,208 MIIESLKEGLRGGDREGRCA STAVFVYAISLEVSTWMPSS 208 AF1309 5 out 1 211 3 3 3.76 69,100,122,170,192 MSDLLPLISVYGYVAALLLI PKGLDNLSVSILTAILYFWM 209 AF1735 5 out 1 319 1 3 1.29 29,165,220,246,313 MFRERTFVSIVFLIVFVAGI AAFSVLAFLLLAVSPLLVKI 210 AF1823 5 out 1 154 9 7 17.86 24,57,79,105,142 MNIDTLIIAVAGLFAVASSI LFTLVVLMMLSAIKLARRVD 211 AF1897 5 out 1 355 1 1 1.99 144,245,274,303,339 MLDLQMKTAVIAVYKNAAFL LVRVAVARVTGRKIELKDWV 212 AF2041 5 out 1 162 4 5 4.86 36,66,94,124,147 MSVLAIIFLLNLKPTIYSIV VLFAFWLVIKGRKLSEVVST 213 AF2137 5 out 1 283 5 0 5.56 35,88,129,157,179 MRDILFIYLLTLGIKLYAYF PEVKHISVHFCPHDGRRRKL 214 AF2369 4 in 9 329 9 2 -15.79 34,57,79,105 MDRFTALAIIFLATVLLAAG EKAKEAFEKYHNYKQQQKVD 215 AF0163 4 in 6 183 0 6 -0.72 37,88,143,170 MNISPSPLTDTGKALLRLNL LFIFFLYLSMISAQMSREIG 216 AF2044 4 in 4 221 6 8 -6.04 43,102,148,196 MRVFREVSLADSLSVLNALF IGEGVRFWRERRLKRLLSKQ 217 AF1017 4 in 3 377 8 5 -8.76 40,268,318,356 MSKMYLELAKRNLQRAKVRS SGLYPAWKASRLEPIEALRY 218 AF1470 4 in 3 409 6 4 -6.16 70,300,350,389 MRRMGLPSFSSPTTHLFRNT SGLYPAWKASKLEPIEALRY 219 AF1901 4 in 3 221 9 1 -14.71 25,56,144,209 MKAVISRFIMVLGALFFIGI WYLLCSITFGQIIKKVLRVG 220 AF2078 4 in 3 343 9 1 -20.67 34,156,199,321 MSAMKLSDLLMLILAVFLLA YATRAGEEEVIRLSKRRRLK 221 AF0523 4 in 2 150 1 3 -1.62 33,63,94,125 MSDNAKTSATDIVQRIISLL DALKSKKSAEECPQNTDAEA 222 AF0037 4 in 1 265 1 4 -1.73 96,164,224,262 MEKWLFQSEKLLSFSTLLKG VGASNCLVFAGSLLVCYFLA 223 AF0578 4 in 1 384 9 1 -14.95 86,108,173,202 MQNSPIEFIQKLCRECGPRL EPIMKASQLVKNFVYAIDST 224 AF0802 4 in 1 214 4 4 -4.67 116,142,173,202 MNSCHDRHLPALFQRLEYIT NATILISTFAVIGAIAVDMV 225 AF1268 4 in 1 189 7 5 -7.48 53,99,150,172 MVSAISTVLYVLIPFLVFLF LVPSDSSKTSLVVFYLWVYI 226 AF1379 4 in 1 231 9 4 -11.29 40,70,148,206 MECKKCGSVAVERHSKFVRS GYRREKVVSDSGRGSREPAD 227 AF1740 4 in 1 179 9 5 -10.95 75,104,142,165 MLDLILKTIWLLLPCYTPNN PALHMGINYIAYRLNLKEVP 228 AF2371 4 in 1 152 0 4 -0.98 20,60,118,152 MLIGVTLALVFAAIFEFFRL DNLTVPVTAAVVYFSVNYIL 229 AF2423 4 in 1 209 5 1 -5.20 36,65,168,194 MITLLNLLLAEIAGFITYQH FFAGVYLLSRGVEEEDINSG 230 AF1673 4 out 6 314 4 0 4.48 30,52,85,186 MSSTSTPFLKIGIFLSLVVL TRLEKGDILYILCSGEAPLE 231 AF1475 4 out 4 153 2 3 2.84 64,91,119,142 MNILKLVASILAVLAIGFAG PYLGWILFASALNFAIYLLN 232 AF2214 4 out 4 221 2 0 2.92 61,95,173,196 MSQQIDPQQIDPELKSGQIK TILRVNKVKDEIVTFCTKKI 233 AF0496 4 out 2 175 7 6 7.00 43,82,138,170 MTLKLSQALPESLKSFFIAG AAIPTAIFGVYQVMALVRLL 234 AF1015 4 out 2 160 9 2 10.16 32,85,125,154 MTGFASLPVEFLITVFAMSF TTILLFAGIKLIWVGLWMLE 235 AF2164 4 out 2 132 9 6 12.50 33,64,93,130 MFFNFLIPPNSFSSFPEYVA ATWIAANVASSGLFMAFVGV 236 AF0399 4 out 1 244 3 0 3.87 42,64,115,238 MTNTDNMSPNFLRNAFRRLT PETVIGSLPVVFCSSVDLEV 237 AF0890 4 out 1 397 0 1 0.07 38,186,212,298 MSGGGKSKVYFFWHLAEDMK ELLSMNFFVDNVVGEIPSAS 238 AF1294 4 out 1 178 9 5 13.91 47,108,137,168 MERQFVRGFIDGALSVLGVV MGLVVALFSIAIERGVHFLM 239 AF1618 4 out 1 187 9 6 13.93 46,95,149,177 MVEALILGWNPEYEPLKGWI IWIGLAISYLFFHDVHLLFL