--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Archaeoglobus fulgidus --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 361 AF1362 1 in 24 340 6 3 -6.00 133 MLEKLTIPPNTRFEERNIVA EISEEEEKDGVEKGKVQEDV 362 AF1287 1 in 21 586 4 2 -4.20 129 MKMEEIYREFIELTKLPDNE KKGEKGEHEYFYDDFPELKS 363 AF0366 1 in 18 681 3 1 -3.04 177 MADPMEAMKKEFENRIIPPS AVEEAKKAYEMVKAALEGSK 364 AF0677 1 in 17 643 4 2 -4.76 141 MEEFRKLWQEAYENPEKFWN TIEEEASVEEIKEAVEKLKK 365 AF0975 1 in 17 642 4 2 -4.92 167 MRKMGFIWHPPKELVEESNV LGDTSALENPDSLEKIKEVL 366 AF1112 1 in 16 323 4 3 -4.52 94 MIALGIEGTAWSLSIGVVDE PVEKSYVRPDFRIEDVEVNW 367 AF0493 1 in 14 258 1 5 -1.64 162 MSEFNEKPEKLIVDGLRLDG LRRYIEVGEEMDEITEGGED 368 AF0197 1 in 4 662 3 2 -3.96 179 MEPKILWEPDSEFIKNSNLA PDAVFKVVEAAKPYVEQLEG 369 AF0536 1 in 4 66 4 9 -4.25 59 MDISGMQINEVQSKLKEYYN IVGFVGFVIYILMEILPGAL 370 AF1055 1 in 4 207 7 8 -7.37 40 MRVGSRKLRRDEKGFTGLEA IGAPLTITKTLPPSFTNLTF 371 AF1809 1 in 4 88 3 9 -3.21 74 MKSAFLVLLPLPSSTLQKMQ TLFSSAKETMYSFEYLFSSL 372 AF1413 1 in 3 2425 6 0 -6.34 47 MTEVLKMSTNALNTCDFSVV SYTGSRDVTYEGNIEIRVVK 373 AF1791 1 in 3 189 6 7 -6.06 37 MDTESKTYQFLKDVVSTLII IIGVAKFRVPYIGYLRLLIP 374 AF0190 1 in 2 184 8 7 -8.33 31 MLINTMEKSEIVVAIIAVVV PRWQMSDEDLNDIIAYLKEL 375 AF1096 1 in 2 141 8 9 -8.07 35 MVRRKMDEKGVSPVIGVILM LTLVDIQTNKPILMTHVTVG 376 AF1869 1 in 2 213 6 6 -6.00 114 MRTALIATLGFDEKFCYRAI EVKKRKPLIVSATELAGLIV 377 AF0030 1 in 1 49 9 9 -21.43 46 MRDLLSKKDPKLLKEYIDSG IGNQIKIALAKIFGILSDFY 378 AF0101 1 in 1 216 9 6 -30.86 25 MRRKNVILVIFFLIFFIGFE ITKKGWQLAEGEERVRLIFA 379 AF0189 1 in 1 96 4 9 -4.14 37 MPTHQCHIIRAVPVVRYVVA RALPSHQHQHYANLLPIHFT 380 AF0444 1 in 1 223 9 5 -20.32 55 MFKPKAIAVDIDGTLTDRKR VTPSPDGEGVVEALQFLGLL 381 AF0487 1 in 1 795 5 1 -5.14 46 PENICILLINGACYLASEMK QYKSFDFNVRGEKIVFREVS 382 AF0503 1 in 1 145 8 8 -8.29 32 MSEMYNKKYVIPLILVFLIG YTPSVEKPHYSGIEELSKYF 383 AF0760 1 in 1 959 6 1 -6.53 37 MREVIVEPDERGVSLLLEYL IQSDRDKVTIRKGEGGAISL 384 AF1035 1 in 1 429 9 4 -17.00 42 MRLPAKLKKNAFGWEIAPLK EEIVGKVDVADLLYSDSGFQ 385 AF1161 1 in 1 60 7 9 -7.59 53 MPGEELVRRFLERRVLTEKN VTILILILIGGLKFSQLIPW 386 AF1301 1 in 1 64 5 9 -5.73 52 MKTSLSSLQRGLSEIFAFAY LISVGLLGEFLYLDREAVAS 387 AF1574 1 in 1 400 8 3 -8.00 28 MSRKLLLALTFLVVLGIAVV WYYWWYKNNDRMTYEVEFYG 388 AF1617 1 in 1 77 9 9 -11.00 68 MAREEPCPNCGKMAEIVSEG AIILLGILYYISYQMIAHLY 389 AF1625 1 in 1 581 2 1 -2.00 28 MDSKAVSPLIGFVLMLAIIM TWKGNRDSQIYTDYIELDIL 390 AF1709 1 in 1 304 3 3 -3.11 259 MNKKGNTEEIIERLFSILSS QYFNEIVKLLDEVANLLVYE 391 AF1776 1 in 1 40 9 9 -19.44 37 MRYFEEEKTQIKVSPKTILA AAGIVTGVLIIILNAYYGLW 392 AF2147 1 in 1 195 4 5 -4.00 120 MEIIQNVFNRAENGDRIMIS KLRFSVDGGTIEMSDSFLVS 393 AF2162 1 in 1 177 9 9 -10.18 33 MQMRKYIAVFAISAIIAHIA PQLDALRQRWKCEPTKTYLF 394 AF2163 1 in 1 192 9 7 -27.33 27 MNRRIVKWLILAAIAGIAFG QIVYESPQSVQLPEIILEGC 395 AF2183 1 in 1 217 7 6 -8.00 43 MTLLSINYEKFKYIEVPELL TITDNVKFMMELFKAIPNAL 396 AF2101 1 out 25 402 7 3 7.56 226 MRALVVELRLWKAALSLLLG LRAAIEKGKSGAVKVAFDFT 397 AF0191 1 out 19 86 6 9 6.31 73 MGAMRSAAIEVVDVVIMDDR AVFADVGVTLIAVMNSMRLL 398 AF1420 1 unk 14 249 0 5 0.00 21 MEWYWIGLLIVVVLFLLSAV TTIVMPIPVELLKFFVEKAK 399 AF0909 1 out 13 257 1 4 1.16 129 MRVAVSGAAGRMGRLVVKNA AAKWIAKVDKPGFYTMDDFL 400 AF1697 1 out 13 157 9 9 37.36 154 MIELFTSTRVQILSKLIERP LLLLAAAFAFLLIFIFMRFR 401 AF0078 1 out 7 246 9 4 17.51 22 MQKSLVIALIIAVVASTASI NRVCEMEVGYFGNIAEKCVE 402 AF0807 1 unk 7 366 0 0 0.00 MERYNKRVGADVPLTKDFLK RIMKLTGAKSVKEISKEAVV 403 AF1225 1 out 6 212 9 6 12.21 206 MIPLVALLVLLTLQASPGDI FFMVSLFVGSFVALVFVARK 404 AF1564 1 out 6 215 4 7 4.30 73 MRAKLLLIFLLLTYPVSAFS EELGIIIKDGKKYGLHCTDK 405 AF1032 1 out 5 886 4 1 4.00 815 MILLKELQIKNFRSHSDSKI DKVIFVESQGGVSRVRYVEA 406 AF2412 1 out 5 425 9 2 11.40 321 MTLIEDARKGVVTDFVKKAA ACSMCGDLCAIKLVKEAFER 407 AF0369 1 out 4 45 8 9 8.57 37 MIVAIMVMNAKGVSEVVGTL ITFALVAVVFNFITAATVKN 408 AF0649 1 out 4 233 3 5 4.00 89 MRRFKFQYKETIVTILTENE LAGNLPSLAFAESKEDLITK 409 AF0815 1 out 4 349 2 3 2.22 303 MEVEEGRARVKVEGVFYNPR CVKTDADRDVVVKILRSRKI 410 AF1054 1 out 4 203 1 7 1.13 38 MGMRFLKNEKGFTGLEAAIV ATYPIELKAPPSIDSMMVLL 411 AF2370 1 out 4 201 3 7 3.46 40 MSSKTDIAEAASSETSSVVV EVRVLSDSLEKLVDALKKLR 412 AF0213 1 out 3 259 9 5 17.00 255 MAHACLIEIKKVYNFVVTFV SISLPIIILFQRMIFLGLLA 413 AF0876 1 out 3 584 9 2 26.86 577 MKLKLLLVISIIVVLSSTSQ ILAPIAVAAAVVAAVAIRKR 414 AF1457 1 out 3 105 9 9 16.83 49 MDARDIVLSVISVFSAAALV FIEKVRDLEDKLESIERRMY 415 AF0146 1 unk 2 71 0 9 0.00 18 MIIAIVAVVIFLLNFLTPYG SSSNGGSMITKPSTGACQGG 416 AF0729 1 out 2 87 9 9 24.09 76 MKKLLLLLILLIFAAKVTAE GSLIIGYFLGYYRGLKHARN 417 AF1560 1 out 2 134 9 9 11.96 31 MMSVGMLSFENVFFIAFSAY IAMNIRSDVTVKNESLIISI 418 AF1597 1 out 2 58 2 9 2.28 44 MGEDAVRLGELALKLERYRY MITLASSLMLLGLGYEVHWH 419 AF1794 1 out 2 392 1 3 1.48 347 MKVWLVGAYGIVSTTAMVGA TNVINTHEQFVVLKEWYSNL 420 AF1991 1 out 2 118 1 9 1.32 48 MFEPFLLAVEGQEFLTGFHV ILKDADDWDDDSWDDEGDWD 421 AF2352 1 out 2 91 5 9 5.60 69 MTSTFFKYSVLLLPALINLA NSDMKGFSGYLLPSYSFLYH 422 AF0001 1 out 1 126 3 9 3.62 46 MQLSIPFWSDFNSAFEEFVK LPCDPSRRLFQSHFGLISTT 423 AF0063 1 out 1 61 0 9 0.59 41 MDVEVANMAAKLRVRGLKLP GIRYEGLEILTPEEFVEKYL 424 AF0095 1 out 1 108 2 9 2.31 31 MERWDPLTWHCIISSYYFYI RLTTEHHKANRGQATIRKTL 425 AF0214 1 out 1 676 9 2 58.50 668 MRAPLLATAVAFLLIYPAVA ICIAAIGFIIAAAFVRKRRK 426 AF0236 1 out 1 40 9 9 18.18 29 MVIAAMLVPFVAIRSHDMTT TYLYWTAVTAAYLTYLTIKR 427 AF0282 1 out 1 113 6 9 6.73 76 MPDYLVVLQAAWIVRKARSV YEIGKRMPRIPLEVIEVAEI 428 AF0540 1 out 1 228 9 5 32.00 223 MILLLLALISATTAFQGDVV QTLFFVTLSFLVGSAFALMR 429 AF0599 1 out 1 250 1 4 1.33 244 MSAIIGAPINSKTAYILDKF HAISIPLCYDILWNVSMMLK 430 AF0644 1 unk 1 35 0 9 0.00 20 MHTYAAIFGVVAILLHLIEN LHLIENRRCVKLYVRETLRG 431 AF0657 1 out 1 145 4 9 4.00 140 MSSSNLSSRKTRISAHFLDA LLIIALVFLLFVAIFITNML 432 AF0748 1 out 1 299 0 4 0.00 229 MKVGIVLNPHAGGGFDDLKR RAEVAIEDGVVRVLKPFKEE 433 AF0754 1 out 1 379 9 5 16.56 322 MMIGKTEAVTLYMISEGIGS VQEFVRTVREEISKRKLRSS 434 AF0759 1 out 1 262 8 5 8.00 35 MLYHLNNNGVSEVVGALLTV TIKIKKASGDISIIFTRVEV 435 AF0761 1 out 1 105 0 9 0.31 31 MENIMDEKGQMILLFAFVVV VGVDKVEFKNVEVDYCAGSD 436 AF0763 1 out 1 190 1 7 1.33 33 MDNQAKLSLDLLLGLSIFLT AIPCESIAERCVCKLEVAVW 437 AF0870 1 out 1 53 9 9 15.00 38 MESHHKWGIAFIAAGLALEI IVVGIALILFGGREKKIEGV 438 AF0872 1 out 1 64 9 9 17.05 61 MPGIVPHRHCVVCGKAIEPD ILMFGILILLLVMMWLPYFK 439 AF1051 1 out 1 161 9 8 16.00 28 MVMAMGFDTVVAAIMATAII GTYVLLICTPNAVCDSADFS 440 AF1070 1 out 1 413 0 2 0.00 158 MKDVARDIYLSRDKIDEIKR EVVQPGSLERFEGKAKRLFR 441 AF1138 1 out 1 554 9 2 53.14 547 MKFFRFFLLAAIAALLTGSI LGIIAVTILALIILIKKVGR 442 AF1172 1 out 1 236 9 4 14.62 50 MQILKTSDVPTGIVLLDRRL TEYFRFYVEEGIQVDTSRDI 443 AF1204 1 out 1 40 0 9 0.00 26 MFPADVILQCFGFSVGIALV VGYVISLFLDWSEEEGDEDD 444 AF1230 1 out 1 153 9 8 48.00 148 MDEYVELDPVRIGVKVNPKM MLYAVIAIIVIAAIAVYLKR 445 AF1410 1 out 1 357 9 3 17.33 48 MLCADRDLNPGQGLGKPLCY AFLRKLPAERVFEYGRWLFE 446 AF1454 1 out 1 286 9 4 24.00 191 MKFRTLFNLLTACILLFADV APLPPGVVWEYRSDGTTYRK 447 AF1657 1 out 1 151 8 9 8.00 141 MRPKLYLLSAILLTILALYL ILIPGIALLIIEIKSIVGEL 448 AF1680 1 out 1 197 9 6 24.00 106 MKKFMINCFVHLKEICYLSD LGYISELLKRIKILQMRIKE 449 AF1726 1 out 1 286 9 3 20.00 23 MFLHDTYLILIFVFKFIMLM EGVEEVKSLIDALKASLEAV 450 AF1766 1 out 1 595 9 2 12.00 267 MVKFKLFALITVCTLFILNP IEDLDRVWANLERLRRGLKR 451 AF1863 1 out 1 355 7 3 8.00 149 MFDMFEKAVVFGLYSITPVH TVGKGFVKVRAGVLTGGHKG 452 AF2027 1 out 1 227 9 6 31.33 221 MVIALLLILPTVQAQKVEEI VVFWGALLALAVILLVLGLR 453 AF2109 1 out 1 608 2 2 2.44 36 MQQNLHSGEKFLGCGSNVET NEPSGAMFVVKLPKRFRERC 454 AF2123 1 out 1 143 9 9 9.46 51 MANAADFANALMQIVLANFE LAKSGVEVAMRMLENINSTL