--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Aquifex aeolicus --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 2983404 18 out 52 787 0 0 0.78 49,84,120,142,177,212,250,279,329,380,408,489,616,666,688,716,745,787 MQYMIILPILLQLVSAFLVY RVFKPALGILVLLLVIGFFI 2 2984083 15 out 3 499 9 0 11.04 25,49,71,107,148,175,202,252,282,322,357,401,423,445,475 MPSLFRASLLFSLGILLSRI LAILISYGIFRRGKILQRES 3 2983742 14 out 76 622 1 0 1.16 53,99,137,159,194,228,266,295,346,392,427,475,512,616 MSMMVELGVIFTPLIAFLII LATGLTIIVLILFAITIRGG 4 2983794 14 out 76 644 1 0 1.42 50,96,134,156,191,225,262,293,343,389,424,473,509,640 MEGLFVIFTPLIAFLIILAF LFLAVGLTFILGIMLYILDR 5 2983744 14 out 33 464 6 0 6.27 26,50,85,126,148,175,210,246,274,305,329,377,412,455 MNWNAILPEAILAIGILTVF LVIFFGLFPHVVLDFILRAL 6 2983796 14 out 27 488 6 1 6.95 37,67,100,137,159,188,228,265,293,324,348,397,430,478 MDLRALIGVIEIPDLKKFLP GVLPSLVWFLIKQSAENLFT 7 2983694 14 out 5 555 2 0 2.44 23,75,99,152,178,205,244,272,308,351,409,486,512,543 MHALPLIGIAFLLYAFGYFV LLLEMFIIFESFRAVRRAPA 8 2983795 13 in 75 501 0 0 -0.68 27,54,102,146,188,236,267,300,326,349,395,431,482 MEKVGFEFPIISVSLAIPAV FFAFYNEFLVHLLKYVLKLP 9 2983743 13 out 74 491 1 0 1.10 23,47,96,135,157,181,226,258,291,339,388,424,475 METLLNVAIFLPLVGALLVA GIYPYPFVKIVEHTSKLVFG 10 2984382 13 out 5 592 0 1 0.17 33,77,114,152,190,237,272,307,367,403,446,493,546 MWVMQVSNAIKFIILTEIIF GAEKKEEKKELSKAEGGITQ 11 2982847 13 out 2 407 5 0 5.91 29,60,83,136,166,200,229,270,308,330,359,381,403 MEILNRLTLTDYIVFTSFIL LVFTLLIPVLIFIVLFGKSV 12 2983090 13 out 2 387 5 0 5.66 29,51,74,113,135,170,199,244,266,289,319,347,380 MCRRLSLSSELFLIIVFLSA LTAAFSSLVFPWSAKIILSR 13 2983346 12 in 11 1000 9 0 -10.27 28,349,379,401,446,474,533,861,883,909,958,992 MQKFFIERPVTAFMLMLSFV GLPLSLFLLPVLYELMEWKR 14 2983882 12 in 4 443 2 0 -2.81 31,54,87,145,167,202,243,298,321,359,387,420 MVKKLNPSRTLLFSFSLLIL LALTGRSEVQRIKYPEARIL 15 2983160 12 in 2 441 9 3 -10.90 57,80,133,162,199,221,257,286,340,376,408,432 MGIEEKLTTASKIKSLLNIR GAYIVICSLSYIILYYKYRR 16 2982882 12 in 1 472 8 2 -8.13 47,76,113,156,184,219,268,297,340,375,409,434 MQRIIVNPNEPYLSVIKKVV EPEGEDAEGDKPLDEVRSKV 17 2983440 12 in 1 408 9 1 -13.17 35,69,108,130,172,201,224,253,297,321,374,396 MSPGGLNLLYLPPFSIIARF GVLVYVKHIKRAQSPSTSNI 18 2983553 12 in 1 511 2 0 -2.13 33,72,98,163,185,220,251,291,326,353,387,499 MSEFYEKISPSQRIFLTVSL SLPIFYLFFELLYEKFIKKR 19 2983936 12 in 1 378 7 0 -7.45 42,65,106,128,152,186,228,253,294,316,353,375 MRSRVPRKEIKSLAFALYDT ALLMGTLPLIGFFIYLKTKL 20 2982784 12 out 14 446 0 1 0.63 25,55,93,140,180,220,262,293,318,361,403,443 MNKNVFLVLAILVFFGVLIT LILNIVFSIVLAAFFTVYVG 21 2983453 12 out 6 408 5 2 6.00 35,57,86,111,140,182,215,259,311,340,374,398 MAAAPVEGNGAGLDVHTLFL FVVAVTTLIAPIVLKLLLKE 22 2983666 11 in 2 392 1 2 -1.54 34,61,103,125,160,182,228,265,291,314,368 MLTKEEKKVVSGITFVVVAR LVWLLGIGIWIKNVEIKKRS 23 2983669 11 in 1 499 5 1 -5.50 22,76,98,127,149,184,220,271,311,359,394 MMKKFLLVLIPVLILYFYNL KFMLDIKRKKRFEEFLLCVI 24 2982800 11 out 109 409 0 1 0.73 59,107,140,162,192,217,269,307,330,363,392 MGLIEKIVDWIDERAHVREI SLPIISFIEYGWYKAKGGQQ 25 2984381 11 out 49 485 7 2 7.51 37,74,122,163,213,244,278,310,349,385,429 MPGMQVVDFKTYNYLLTGHG HPPRVEPDWHPYRYDKEEIL 26 2982857 11 out 18 423 9 2 11.28 50,85,141,165,203,236,265,293,316,354,395 MRALGFIGIILSIFSSFAYA VSEEEELELDSSLHGEKAYN 27 2984293 11 out 17 513 6 1 6.94 60,117,187,213,265,303,352,398,425,467,500 MEVKREHWATRLGLILAMAG LFLFLTFLVFLAERRRNHES 28 2983120 11 out 9 1019 7 0 7.56 27,368,406,455,487,541,877,904,926,976,1007 MFRAVLKYRLLVLIALVGTV LLTLIILPSVYELVYRKFPR 29 2983589 11 out 8 1050 6 0 6.60 30,366,405,452,484,539,903,927,951,1006,1037 MERFTEILLRNRLPILFISI IVLIIVPALYAIYVDFRRGN 30 2982930 11 out 5 475 4 0 4.95 41,75,100,128,191,226,255,289,318,356,441 MNFLKEIIEAIKKGNPKALF EKETLVGIDPKSGRVIMELA 31 2983602 11 out 5 448 5 0 5.88 35,102,141,172,208,242,271,293,373,402,432 MKFAEKIYPDKVILTLLFVF NMIMLGIVGSIYRRNSDVLN 32 2982892 11 out 1 386 7 0 7.25 22,62,93,123,159,206,231,266,293,322,353 MLWFSLFILSIAIGGSFALL KLRERITYKTQRFTYSWLSW 33 2983282 11 out 1 1082 4 0 4.75 32,378,417,474,501,563,922,946,977,1035,1057 MYGLAGRLANFFIDSKLTPI KRMPPEACPTPEMIKRDLMA 34 2984319 11 out 1 487 4 0 4.36 41,84,113,141,242,323,345,381,403,430,459 MPLPSSVWRSTLRPRVRRLA PSERVQKLVEDIRYPKKIHE 35 2982812 10 in 33 429 9 2 -12.10 36,88,135,169,200,235,290,327,386,408 MSEYLKALFELKELRQKFIF DTFRQIETYLIQKKYKSYVR 36 2982781 10 in 16 372 9 0 -12.26 31,62,89,123,155,184,206,285,323,352 MRFLEELRELDFFLLLILLC QYIYKKYRYPYMKLEKDGIY 37 2983712 10 in 6 605 0 0 -0.65 54,80,135,159,208,230,284,364,386,423 MKRAEEVPGITVSFSIKFPF VFDECLEVKPPEKVQELKKA 38 2982830 10 in 5 322 6 0 -6.84 21,56,96,124,151,190,220,259,287,317 MLTDLGLLTLGFFLLVKGAD GGIFLLAYFIYVIASWYREL 39 2983382 10 in 3 324 9 0 -11.72 29,70,92,116,145,171,236,259,286,314 MLKNLIRSVIKGSVLLVFFL LGGILFFICLLIDTKKYLKV 40 2984034 10 in 3 416 3 2 -3.75 24,90,119,149,177,215,257,283,306,329 MKKDLFLISLVSFVFFIFGN NYKLLIEGLEFEGKEVLIKV 41 2983688 10 in 1 468 2 1 -2.08 18,72,95,137,180,215,275,302,325,353 MFYILIILLATFSMIPNINE INTFNRSRGSKVFEGMSGAR 42 2983769 10 out 5 468 5 1 5.60 34,76,117,148,206,238,287,368,402,451 MDAVLLARIQFALTAMYHFL IFLGLMVQKVIKGPKRPEEV 43 2983811 10 out 3 292 9 3 10.87 23,51,79,115,148,172,196,235,261,289 MFIYEKVFFILLIIAFAYTL SAITLGIVISLFTVPVFRIL 44 2983167 10 out 1 357 2 1 2.10 22,65,87,119,152,180,204,239,313,342 MLFPLITFLISFFLCFLFIK FYTWLYFRIVKFKTPKIFRI