--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Aquifex aeolicus --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 17 2984080 1 in 61 335 1 2 -1.28 142 MRMKKTVAVIGAGNVGEHVA ESVKKTVEVAEGILSAGSSR 18 2983239 1 in 16 726 9 1 -12.05 26 MKKLVIGILGIVIALFVGLL FVKGTEPHITCSDLNAILGL 19 2982783 1 in 12 288 1 2 -1.84 190 MKVGFIGLGHLGRAIAKRLI ARKEGFGNLDFSAVYKLFKE 20 2983781 1 in 10 499 5 1 -5.44 265 MKILKAHEMSSIDNKTIEEI SVKATDVTESLPEAFREIYV 21 2983257 1 in 9 360 0 2 -0.88 112 MGEFLELDGSYGEGGGQIVR FLGKIFEVDEKEKIVRTQGI 22 2983201 1 in 7 426 0 1 -0.80 134 MRSYPAIPRIYAETTLNMLL TLEKFPEEWEKYRKKSASLP 23 2983225 1 in 5 409 0 2 -0.08 161 MAKVKGLKCRECGREYPAEP STPVKIKPTLKDFKEKVLAR 24 2984360 1 in 4 267 0 2 -0.80 196 MQDWEKLLQDDYLEIAGRKF RMPKRTYAVPSSPTKGVPFK 25 2982986 1 in 2 472 9 1 -16.00 137 MTNFIGFENLDKIDYETIRG TIDYFLKRYEEEVLKRREVA 26 2983078 1 in 2 203 3 6 -3.33 185 MRYDVVIVGGGPAGLACALT INILSEWAGKPIVIHDVPKE 27 2983091 1 in 1 439 3 2 -4.00 140 MSVVIIGVGRYAREVLEIVT HLIARKSKLSTLLVPEVVLE 28 2983615 1 in 1 389 2 2 -2.00 122 MPEQRVVEPDYLLLEAPREK ELIMEEIYKAFGIKKEKKVV 29 2983621 1 in 1 244 3 3 -4.00 147 MWRLYMAKKNPIQPGPEGYI DFGEYAYLLIPRRGEIVEES 30 2983872 1 in 1 208 1 3 -1.00 22 MSIKIKSMLILLILLTITLV TPTDELFKPSIPEGFKVLRY 31 2984018 1 in 1 296 9 3 -34.00 22 MKKPILVILFFIGFIFSQIV CNTFISRFFFRKVNRQGCSF 32 2984120 1 in 1 355 4 2 -4.00 154 MWKEKVRDNILGEVIDWKAL EDLSKEFLNKAWEVLDESTS 33 2984159 1 in 1 441 1 1 -2.00 248 MDNLENLVKKYIKPGYEYEV TFYGSVGSPSVLVKKLTLGG 34 2983315 1 out 56 465 1 1 1.84 191 MEFDLIIVGAGSGGYEAGLY ENIGIASSEVYYGPISWVKR 35 2983768 1 out 42 343 1 2 1.44 191 MKAVILTGFGGIENLKYVED PQAHKYLEESKHFGKVVLKV 36 2983928 1 out 31 144 9 7 18.96 29 MDIGVMPNATILVQLFIFVI LEKSVKEIAQEIVKKILREA 37 2983347 1 out 30 258 4 3 4.36 162 MRLDKYLTDKGIVPSREKAQ RKGEEVNLSEAIEKALEEVV 38 2983909 1 out 29 327 3 2 3.60 113 MSLKSCLMWVLGEHDEPYRK VTVFPDGGEKYLTTALFSDK 39 2983802 1 out 28 219 0 3 0.76 149 MKFSLEGSKSTPSTAGSTPP LQDILKAGGLMAYAKEKLAS 40 2982885 1 out 23 265 3 3 3.20 186 MHAIILTMRVGIVGFGNMGQ KGFKGTVMECINRTSQKAKK 41 2983755 1 out 23 201 9 4 10.60 113 MNHKEILDQLVPIVIEQTPR FMSPYEAKDYGLIDKVIEKR 42 2983107 1 out 20 276 6 2 6.20 218 MRFLDRFFKKKKKEEALWTK HRKELKDKLAYFLEVMYYAK 43 2984152 1 out 18 368 5 2 5.24 127 MAKSLLFITSFLKPRYNKPI GKVEPLYRTIDPETCEFKPQ 44 2983962 1 out 17 305 8 3 8.88 96 MAILVNKDTKVVVQGITGKE TVAKILKVIELEEEERTSDA 45 2983085 1 out 16 133 4 7 4.21 26 MRRGFTLIEVLVVLIILGLL LKSVGPDGIEGTEDDISVWD 46 2982811 1 out 15 398 0 2 0.37 372 MSLRYLRFLTAGESHGKGLT GDFMEEVKKRFEDYVNHVKS 47 2983268 1 out 15 353 9 2 22.34 344 METFWEVFKRHGVSRRDFLK AGGAIIHGIASKIRKSGEKE 48 2982782 1 out 12 402 2 2 2.88 313 MKNLTPLEEALKIVLENVKP MVVYEGVNELKKGQEVEVIL 49 2983084 1 out 10 352 1 2 1.88 109 MNRWQGIIKQYKKYLPVDEN VCEEPITVPPDFDEVVKVLG 50 2983597 1 out 10 221 9 4 12.52 125 MPKLYVIPTPIGNLKDITLR IIQELESREKIKGEVVVLFR 51 2984168 1 out 10 482 5 2 5.24 337 MELIFEKSKKGRKGYKLPEL RRIKEAEANRNLILKFKDIK 52 2983351 1 out 8 389 9 2 15.83 374 MAKVLVLGGGIGGTEAAIAL MKKAWGVYYKLYKLGKIPKI 53 2983845 1 out 7 453 9 2 12.24 237 MRKFLLPFLLIISVTFSSTL SKALLLVRRGDRNIFITLDL 54 2983081 1 out 6 380 9 2 9.92 107 MKLGVLGSTGSVGSQTLQVY AVEWGRQKVREIYERKYAGK 55 2983418 1 out 6 334 8 2 8.26 305 MRIEEFDYELPEELIAKYPA YREAVEKRYRFYSYGDGMLI 56 2984298 1 out 6 157 2 7 2.83 54 MLAFGNTRTRSGEVYFGFLY KSVQEKIGRDINIATVEEKK 57 2982827 1 out 5 59 9 9 22.46 22 MHFPLPWQLILILLVILVIF FKKALSGEEEEKGKEVKKEG 58 2983519 1 out 5 311 9 3 9.72 74 MKGFNIYTDESTLVSIGDDA ELEVNYWIIGETIAENVLEV 59 2983444 1 out 4 274 9 3 13.60 203 MRKVLVFLKNSKKAFETFKR RMYSHPRKSFFGILKEKLRW 60 2983831 1 out 4 356 5 3 5.00 272 MKKIFLSLADRSASNYVYEI KFILGERFVIRKLRELFLEI 61 2982801 1 out 3 150 6 6 6.94 70 MDIQEIMEILPHRYPILLVD VVAQATLMAAARKLEDIKRN 62 2983499 1 out 3 167 0 5 0.36 23 MGKGSWIALIFLLLICFVFS GEGSFVNGELTPQTVIIIER 63 2983624 1 out 3 226 5 3 5.82 29 MERFLGFRTPLGALGVVILL KLGMIRDGVIPFEAKVLRCG 64 2984008 1 unk 3 164 0 4 0.00 20 MRVLKILLFIIFFSFGVEAV VAEGYYKKMSYFKFKRMIKK 65 2984270 1 out 3 133 7 5 7.00 30 MLQMNKLKYRLIFLMLPFIG YLKEGKNVAITVDGPKVPLT 66 2982880 1 out 2 151 7 9 7.15 118 MRQVSVIGSSKASEEEYEFA EQVESLEEMLKKVDEFFGGR 67 2983052 1 out 2 111 1 8 1.44 77 MNEILKTEDEVVRWSVKKIN AVVVSSHSPNKKVGDVIKWE 68 2983380 1 out 2 218 2 3 2.72 118 MKKHDGIIVLLSGGMDSATL EPPCGECPTCIQREEALRGI 69 2983708 1 unk 2 625 0 1 0.00 18 MRIIILLFLILSLGFSGVVL LKKKEEKKVEVEEEDWWDED 70 2984385 1 out 2 430 9 2 12.00 165 MAKHVVVIGGGVGGIATAYN FLKVHPIELCKDCEGAPGSR 71 2982843 1 out 1 113 0 8 0.50 93 MATLSKLKELMSIPGAVAAG VFVELDKADFDKIFETLSKF 72 2983040 1 out 1 265 0 2 0.50 209 MKKALLYRRGGLGDTLLTFP LDTEEVLRKTKETLLRYWNS 73 2983059 1 out 1 325 8 2 8.57 53 MKIYLFKPYDVIGFGGLKNF SNIKNFLNRGWNSGIIVEGV 74 2983069 1 out 1 141 9 7 18.59 62 MAGQEFEKLLFYIVTVPFFV ILGGAAFLDKLMSGEYAVIT 75 2983080 1 out 1 182 5 5 5.13 41 MPTERLAIIATKGTLDMAYP AGATEFFNYVLAADKPMIIF 76 2983286 1 unk 1 437 0 2 0.00 18 MVLIGFLLLVGLSFAAELPL CNVAYAKALFSAGLLKEEVL 77 2983316 1 out 1 320 7 2 7.81 299 MEEVYKVVEGFYNQFEWEDI GYDPVPVKTIERIKEELKKH 78 2983480 1 out 1 307 9 3 20.00 24 MGGAVMLKTLFVLLLIISTA MYEVFHNTNVWKVYNELDLE 79 2983611 1 unk 1 462 0 1 0.00 18 MFPLLVISVIFLIFSCGPVA YAGDIDGGDYAFITDIKLSS 80 2983631 1 out 1 230 0 3 0.00 159 MKRYNIRIAGVGGQGVVTSA TMKMAEENGWVEEEEEQVKA 81 2983644 1 out 1 404 0 2 0.00 135 MAQQVKTEKVRYNRMGQRIV PPEFIVQEVLRLIGKEVKHV 82 2983760 1 out 1 415 5 2 5.71 25 MSGEMRVIWVILFLFTFSFP TLHFLTYRYMSTLALIERLT 83 2983798 1 out 1 260 9 3 20.00 22 MTTFPFLFIVLRFYTLMFPV PVKLPGGKEVNLKPYWYPLE 84 2983812 1 out 1 682 9 1 32.00 657 MALSFSQTTSVKLSEFLGKN DYRAKKRHQQEEKEGKEEEK 85 2983922 1 out 1 460 4 2 4.00 364 MISGDLKGPGDLLEILSGFP YTEILRVLNLSTEISAVEEA 86 2984173 1 out 1 237 1 4 1.36 71 MVIMLIFASSTGTILPSKKA NYWEAKREIKKHFKDAIFVR 87 2984277 1 out 1 211 8 3 8.03 152 MCPLTPVGKYLLLPLWLGVR KRVANEIMEEIKKLAQSLHR 88 2984371 1 unk 1 165 0 5 0.00 19 MIRGFFLILLFLLLAFFSEN KIFFKPFKVQINEVESIHTT