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Transmembrane helices for aquae (Aquifex aeolicus)-- Low Reliability Report

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN

17 2984080 1 in 61 |ali|phd|phdHtm| 335 1 2 -1.28 142 MRMKKTVAVIGAGNVGEHVA

18 2983239 1 in 16 |ali|phd|phdHtm| 726 9 1 -12.05 26 MKKLVIGILGIVIALFVGLL

19 2982783 1 in 12 |ali|phd|phdHtm| 288 1 2 -1.84 190 MKVGFIGLGHLGRAIAKRLI

20 2983781 1 in 10 |ali|phd|phdHtm| 499 5 1 -5.44 265 MKILKAHEMSSIDNKTIEEI

21 2983257 1 in 9 |ali|phd|phdHtm| 360 0 2 -0.88 112 MGEFLELDGSYGEGGGQIVR

22 2983201 1 in 7 |ali|phd|phdHtm| 426 0 1 -0.80 134 MRSYPAIPRIYAETTLNMLL

23 2983225 1 in 5 |ali|phd|phdHtm| 409 0 2 -0.08 161 MAKVKGLKCRECGREYPAEP

24 2984360 1 in 4 |ali|phd|phdHtm| 267 0 2 -0.80 196 MQDWEKLLQDDYLEIAGRKF

25 2982986 1 in 2 |ali|phd|phdHtm| 472 9 1 -16.00 137 MTNFIGFENLDKIDYETIRG

26 2983078 1 in 2 |ali|phd|phdHtm| 203 3 6 -3.33 185 MRYDVVIVGGGPAGLACALT

27 2983091 1 in 1 |ali|phd|phdHtm| 439 3 2 -4.00 140 MSVVIIGVGRYAREVLEIVT

28 2983615 1 in 1 |ali|phd|phdHtm| 389 2 2 -2.00 122 MPEQRVVEPDYLLLEAPREK

29 2983621 1 in 1 |ali|phd|phdHtm| 244 3 3 -4.00 147 MWRLYMAKKNPIQPGPEGYI

30 2983872 1 in 1 |ali|phd|phdHtm| 208 1 3 -1.00 22 MSIKIKSMLILLILLTITLV

31 2984018 1 in 1 |ali|phd|phdHtm| 296 9 3 -34.00 22 MKKPILVILFFIGFIFSQIV

32 2984120 1 in 1 |ali|phd|phdHtm| 355 4 2 -4.00 154 MWKEKVRDNILGEVIDWKAL

33 2984159 1 in 1 |ali|phd|phdHtm| 441 1 1 -2.00 248 MDNLENLVKKYIKPGYEYEV

34 2983315 1 out 56 |ali|phd|phdHtm| 465 1 1 1.84 191 MEFDLIIVGAGSGGYEAGLY

35 2983768 1 out 42 |ali|phd|phdHtm| 343 1 2 1.44 191 MKAVILTGFGGIENLKYVED

36 2983928 1 out 31 |ali|phd|phdHtm| 144 9 7 18.96 29 MDIGVMPNATILVQLFIFVI

37 2983347 1 out 30 |ali|phd|phdHtm| 258 4 3 4.36 162 MRLDKYLTDKGIVPSREKAQ

38 2983909 1 out 29 |ali|phd|phdHtm| 327 3 2 3.60 113 MSLKSCLMWVLGEHDEPYRK

39 2983802 1 out 28 |ali|phd|phdHtm| 219 0 3 0.76 149 MKFSLEGSKSTPSTAGSTPP

40 2982885 1 out 23 |ali|phd|phdHtm| 265 3 3 3.20 186 MHAIILTMRVGIVGFGNMGQ

41 2983755 1 out 23 |ali|phd|phdHtm| 201 9 4 10.60 113 MNHKEILDQLVPIVIEQTPR

42 2983107 1 out 20 |ali|phd|phdHtm| 276 6 2 6.20 218 MRFLDRFFKKKKKEEALWTK

43 2984152 1 out 18 |ali|phd|phdHtm| 368 5 2 5.24 127 MAKSLLFITSFLKPRYNKPI

44 2983962 1 out 17 |ali|phd|phdHtm| 305 8 3 8.88 96 MAILVNKDTKVVVQGITGKE

45 2983085 1 out 16 |ali|phd|phdHtm| 133 4 7 4.21 26 MRRGFTLIEVLVVLIILGLL

46 2982811 1 out 15 |ali|phd|phdHtm| 398 0 2 0.37 372 MSLRYLRFLTAGESHGKGLT

47 2983268 1 out 15 |ali|phd|phdHtm| 353 9 2 22.34 344 METFWEVFKRHGVSRRDFLK

48 2982782 1 out 12 |ali|phd|phdHtm| 402 2 2 2.88 313 MKNLTPLEEALKIVLENVKP

49 2983084 1 out 10 |ali|phd|phdHtm| 352 1 2 1.88 109 MNRWQGIIKQYKKYLPVDEN

50 2983597 1 out 10 |ali|phd|phdHtm| 221 9 4 12.52 125 MPKLYVIPTPIGNLKDITLR

51 2984168 1 out 10 |ali|phd|phdHtm| 482 5 2 5.24 337 MELIFEKSKKGRKGYKLPEL

52 2983351 1 out 8 |ali|phd|phdHtm| 389 9 2 15.83 374 MAKVLVLGGGIGGTEAAIAL

53 2983845 1 out 7 |ali|phd|phdHtm| 453 9 2 12.24 237 MRKFLLPFLLIISVTFSSTL

54 2983081 1 out 6 |ali|phd|phdHtm| 380 9 2 9.92 107 MKLGVLGSTGSVGSQTLQVY

55 2983418 1 out 6 |ali|phd|phdHtm| 334 8 2 8.26 305 MRIEEFDYELPEELIAKYPA

56 2984298 1 out 6 |ali|phd|phdHtm| 157 2 7 2.83 54 MLAFGNTRTRSGEVYFGFLY

57 2982827 1 out 5 |ali|phd|phdHtm| 59 9 9 22.46 22 MHFPLPWQLILILLVILVIF

58 2983519 1 out 5 |ali|phd|phdHtm| 311 9 3 9.72 74 MKGFNIYTDESTLVSIGDDA

59 2983444 1 out 4 |ali|phd|phdHtm| 274 9 3 13.60 203 MRKVLVFLKNSKKAFETFKR

60 2983831 1 out 4 |ali|phd|phdHtm| 356 5 3 5.00 272 MKKIFLSLADRSASNYVYEI

61 2982801 1 out 3 |ali|phd|phdHtm| 150 6 6 6.94 70 MDIQEIMEILPHRYPILLVD

62 2983499 1 out 3 |ali|phd|phdHtm| 167 0 5 0.36 23 MGKGSWIALIFLLLICFVFS

63 2983624 1 out 3 |ali|phd|phdHtm| 226 5 3 5.82 29 MERFLGFRTPLGALGVVILL

64 2984008 1 unk 3 |ali|phd|phdHtm| 164 0 4 0.00 20 MRVLKILLFIIFFSFGVEAV

65 2984270 1 out 3 |ali|phd|phdHtm| 133 7 5 7.00 30 MLQMNKLKYRLIFLMLPFIG

66 2982880 1 out 2 |ali|phd|phdHtm| 151 7 9 7.15 118 MRQVSVIGSSKASEEEYEFA

67 2983052 1 out 2 |ali|phd|phdHtm| 111 1 8 1.44 77 MNEILKTEDEVVRWSVKKIN

68 2983380 1 out 2 |ali|phd|phdHtm| 218 2 3 2.72 118 MKKHDGIIVLLSGGMDSATL

69 2983708 1 unk 2 |ali|phd|phdHtm| 625 0 1 0.00 18 MRIIILLFLILSLGFSGVVL

70 2984385 1 out 2 |ali|phd|phdHtm| 430 9 2 12.00 165 MAKHVVVIGGGVGGIATAYN

71 2982843 1 out 1 |ali|phd|phdHtm| 113 0 8 0.50 93 MATLSKLKELMSIPGAVAAG

72 2983040 1 out 1 |ali|phd|phdHtm| 265 0 2 0.50 209 MKKALLYRRGGLGDTLLTFP

73 2983059 1 out 1 |ali|phd|phdHtm| 325 8 2 8.57 53 MKIYLFKPYDVIGFGGLKNF

74 2983069 1 out 1 |ali|phd|phdHtm| 141 9 7 18.59 62 MAGQEFEKLLFYIVTVPFFV

75 2983080 1 out 1 |ali|phd|phdHtm| 182 5 5 5.13 41 MPTERLAIIATKGTLDMAYP

76 2983286 1 unk 1 |ali|phd|phdHtm| 437 0 2 0.00 18 MVLIGFLLLVGLSFAAELPL

77 2983316 1 out 1 |ali|phd|phdHtm| 320 7 2 7.81 299 MEEVYKVVEGFYNQFEWEDI

78 2983480 1 out 1 |ali|phd|phdHtm| 307 9 3 20.00 24 MGGAVMLKTLFVLLLIISTA

79 2983611 1 unk 1 |ali|phd|phdHtm| 462 0 1 0.00 18 MFPLLVISVIFLIFSCGPVA

80 2983631 1 out 1 |ali|phd|phdHtm| 230 0 3 0.00 159 MKRYNIRIAGVGGQGVVTSA

81 2983644 1 out 1 |ali|phd|phdHtm| 404 0 2 0.00 135 MAQQVKTEKVRYNRMGQRIV

82 2983760 1 out 1 |ali|phd|phdHtm| 415 5 2 5.71 25 MSGEMRVIWVILFLFTFSFP

83 2983798 1 out 1 |ali|phd|phdHtm| 260 9 3 20.00 22 MTTFPFLFIVLRFYTLMFPV

84 2983812 1 out 1 |ali|phd|phdHtm| 682 9 1 32.00 657 MALSFSQTTSVKLSEFLGKN

85 2983922 1 out 1 |ali|phd|phdHtm| 460 4 2 4.00 364 MISGDLKGPGDLLEILSGFP

86 2984173 1 out 1 |ali|phd|phdHtm| 237 1 4 1.36 71 MVIMLIFASSTGTILPSKKA

87 2984277 1 out 1 |ali|phd|phdHtm| 211 8 3 8.03 152 MCPLTPVGKYLLLPLWLGVR

88 2984371 1 unk 1 |ali|phd|phdHtm| 165 0 5 0.00 19 MIRGFFLILLFLLLAFFSEN

num	id	nhtm	top	nali	ali\|phd\|phdHtm	len1	riTop	riMod	topD	htmCN	seqN
17	2984080	1	in	61	\|ali\|phd\|phdHtm\|	335	1	2	-1.28	142	MRMKKTVAVIGAGNVGEHVA
18	2983239	1	in	16	\|ali\|phd\|phdHtm\|	726	9	1	-12.05	26	MKKLVIGILGIVIALFVGLL
19	2982783	1	in	12	\|ali\|phd\|phdHtm\|	288	1	2	-1.84	190	MKVGFIGLGHLGRAIAKRLI
20	2983781	1	in	10	\|ali\|phd\|phdHtm\|	499	5	1	-5.44	265	MKILKAHEMSSIDNKTIEEI
21	2983257	1	in	9	\|ali\|phd\|phdHtm\|	360	0	2	-0.88	112	MGEFLELDGSYGEGGGQIVR
22	2983201	1	in	7	\|ali\|phd\|phdHtm\|	426	0	1	-0.80	134	MRSYPAIPRIYAETTLNMLL
23	2983225	1	in	5	\|ali\|phd\|phdHtm\|	409	0	2	-0.08	161	MAKVKGLKCRECGREYPAEP
24	2984360	1	in	4	\|ali\|phd\|phdHtm\|	267	0	2	-0.80	196	MQDWEKLLQDDYLEIAGRKF
25	2982986	1	in	2	\|ali\|phd\|phdHtm\|	472	9	1	-16.00	137	MTNFIGFENLDKIDYETIRG
26	2983078	1	in	2	\|ali\|phd\|phdHtm\|	203	3	6	-3.33	185	MRYDVVIVGGGPAGLACALT
27	2983091	1	in	1	\|ali\|phd\|phdHtm\|	439	3	2	-4.00	140	MSVVIIGVGRYAREVLEIVT
28	2983615	1	in	1	\|ali\|phd\|phdHtm\|	389	2	2	-2.00	122	MPEQRVVEPDYLLLEAPREK
29	2983621	1	in	1	\|ali\|phd\|phdHtm\|	244	3	3	-4.00	147	MWRLYMAKKNPIQPGPEGYI
30	2983872	1	in	1	\|ali\|phd\|phdHtm\|	208	1	3	-1.00	22	MSIKIKSMLILLILLTITLV
31	2984018	1	in	1	\|ali\|phd\|phdHtm\|	296	9	3	-34.00	22	MKKPILVILFFIGFIFSQIV
32	2984120	1	in	1	\|ali\|phd\|phdHtm\|	355	4	2	-4.00	154	MWKEKVRDNILGEVIDWKAL
33	2984159	1	in	1	\|ali\|phd\|phdHtm\|	441	1	1	-2.00	248	MDNLENLVKKYIKPGYEYEV
34	2983315	1	out	56	\|ali\|phd\|phdHtm\|	465	1	1	1.84	191	MEFDLIIVGAGSGGYEAGLY
35	2983768	1	out	42	\|ali\|phd\|phdHtm\|	343	1	2	1.44	191	MKAVILTGFGGIENLKYVED
36	2983928	1	out	31	\|ali\|phd\|phdHtm\|	144	9	7	18.96	29	MDIGVMPNATILVQLFIFVI
37	2983347	1	out	30	\|ali\|phd\|phdHtm\|	258	4	3	4.36	162	MRLDKYLTDKGIVPSREKAQ
38	2983909	1	out	29	\|ali\|phd\|phdHtm\|	327	3	2	3.60	113	MSLKSCLMWVLGEHDEPYRK
39	2983802	1	out	28	\|ali\|phd\|phdHtm\|	219	0	3	0.76	149	MKFSLEGSKSTPSTAGSTPP
40	2982885	1	out	23	\|ali\|phd\|phdHtm\|	265	3	3	3.20	186	MHAIILTMRVGIVGFGNMGQ
41	2983755	1	out	23	\|ali\|phd\|phdHtm\|	201	9	4	10.60	113	MNHKEILDQLVPIVIEQTPR
42	2983107	1	out	20	\|ali\|phd\|phdHtm\|	276	6	2	6.20	218	MRFLDRFFKKKKKEEALWTK
43	2984152	1	out	18	\|ali\|phd\|phdHtm\|	368	5	2	5.24	127	MAKSLLFITSFLKPRYNKPI
44	2983962	1	out	17	\|ali\|phd\|phdHtm\|	305	8	3	8.88	96	MAILVNKDTKVVVQGITGKE
45	2983085	1	out	16	\|ali\|phd\|phdHtm\|	133	4	7	4.21	26	MRRGFTLIEVLVVLIILGLL
46	2982811	1	out	15	\|ali\|phd\|phdHtm\|	398	0	2	0.37	372	MSLRYLRFLTAGESHGKGLT
47	2983268	1	out	15	\|ali\|phd\|phdHtm\|	353	9	2	22.34	344	METFWEVFKRHGVSRRDFLK
48	2982782	1	out	12	\|ali\|phd\|phdHtm\|	402	2	2	2.88	313	MKNLTPLEEALKIVLENVKP
49	2983084	1	out	10	\|ali\|phd\|phdHtm\|	352	1	2	1.88	109	MNRWQGIIKQYKKYLPVDEN
50	2983597	1	out	10	\|ali\|phd\|phdHtm\|	221	9	4	12.52	125	MPKLYVIPTPIGNLKDITLR
51	2984168	1	out	10	\|ali\|phd\|phdHtm\|	482	5	2	5.24	337	MELIFEKSKKGRKGYKLPEL
52	2983351	1	out	8	\|ali\|phd\|phdHtm\|	389	9	2	15.83	374	MAKVLVLGGGIGGTEAAIAL
53	2983845	1	out	7	\|ali\|phd\|phdHtm\|	453	9	2	12.24	237	MRKFLLPFLLIISVTFSSTL
54	2983081	1	out	6	\|ali\|phd\|phdHtm\|	380	9	2	9.92	107	MKLGVLGSTGSVGSQTLQVY
55	2983418	1	out	6	\|ali\|phd\|phdHtm\|	334	8	2	8.26	305	MRIEEFDYELPEELIAKYPA
56	2984298	1	out	6	\|ali\|phd\|phdHtm\|	157	2	7	2.83	54	MLAFGNTRTRSGEVYFGFLY
57	2982827	1	out	5	\|ali\|phd\|phdHtm\|	59	9	9	22.46	22	MHFPLPWQLILILLVILVIF
58	2983519	1	out	5	\|ali\|phd\|phdHtm\|	311	9	3	9.72	74	MKGFNIYTDESTLVSIGDDA
59	2983444	1	out	4	\|ali\|phd\|phdHtm\|	274	9	3	13.60	203	MRKVLVFLKNSKKAFETFKR
60	2983831	1	out	4	\|ali\|phd\|phdHtm\|	356	5	3	5.00	272	MKKIFLSLADRSASNYVYEI
61	2982801	1	out	3	\|ali\|phd\|phdHtm\|	150	6	6	6.94	70	MDIQEIMEILPHRYPILLVD
62	2983499	1	out	3	\|ali\|phd\|phdHtm\|	167	0	5	0.36	23	MGKGSWIALIFLLLICFVFS
63	2983624	1	out	3	\|ali\|phd\|phdHtm\|	226	5	3	5.82	29	MERFLGFRTPLGALGVVILL
64	2984008	1	unk	3	\|ali\|phd\|phdHtm\|	164	0	4	0.00	20	MRVLKILLFIIFFSFGVEAV
65	2984270	1	out	3	\|ali\|phd\|phdHtm\|	133	7	5	7.00	30	MLQMNKLKYRLIFLMLPFIG
66	2982880	1	out	2	\|ali\|phd\|phdHtm\|	151	7	9	7.15	118	MRQVSVIGSSKASEEEYEFA
67	2983052	1	out	2	\|ali\|phd\|phdHtm\|	111	1	8	1.44	77	MNEILKTEDEVVRWSVKKIN
68	2983380	1	out	2	\|ali\|phd\|phdHtm\|	218	2	3	2.72	118	MKKHDGIIVLLSGGMDSATL
69	2983708	1	unk	2	\|ali\|phd\|phdHtm\|	625	0	1	0.00	18	MRIIILLFLILSLGFSGVVL
70	2984385	1	out	2	\|ali\|phd\|phdHtm\|	430	9	2	12.00	165	MAKHVVVIGGGVGGIATAYN
71	2982843	1	out	1	\|ali\|phd\|phdHtm\|	113	0	8	0.50	93	MATLSKLKELMSIPGAVAAG
72	2983040	1	out	1	\|ali\|phd\|phdHtm\|	265	0	2	0.50	209	MKKALLYRRGGLGDTLLTFP
73	2983059	1	out	1	\|ali\|phd\|phdHtm\|	325	8	2	8.57	53	MKIYLFKPYDVIGFGGLKNF
74	2983069	1	out	1	\|ali\|phd\|phdHtm\|	141	9	7	18.59	62	MAGQEFEKLLFYIVTVPFFV
75	2983080	1	out	1	\|ali\|phd\|phdHtm\|	182	5	5	5.13	41	MPTERLAIIATKGTLDMAYP
76	2983286	1	unk	1	\|ali\|phd\|phdHtm\|	437	0	2	0.00	18	MVLIGFLLLVGLSFAAELPL
77	2983316	1	out	1	\|ali\|phd\|phdHtm\|	320	7	2	7.81	299	MEEVYKVVEGFYNQFEWEDI
78	2983480	1	out	1	\|ali\|phd\|phdHtm\|	307	9	3	20.00	24	MGGAVMLKTLFVLLLIISTA
79	2983611	1	unk	1	\|ali\|phd\|phdHtm\|	462	0	1	0.00	18	MFPLLVISVIFLIFSCGPVA
80	2983631	1	out	1	\|ali\|phd\|phdHtm\|	230	0	3	0.00	159	MKRYNIRIAGVGGQGVVTSA
81	2983644	1	out	1	\|ali\|phd\|phdHtm\|	404	0	2	0.00	135	MAQQVKTEKVRYNRMGQRIV
82	2983760	1	out	1	\|ali\|phd\|phdHtm\|	415	5	2	5.71	25	MSGEMRVIWVILFLFTFSFP
83	2983798	1	out	1	\|ali\|phd\|phdHtm\|	260	9	3	20.00	22	MTTFPFLFIVLRFYTLMFPV
84	2983812	1	out	1	\|ali\|phd\|phdHtm\|	682	9	1	32.00	657	MALSFSQTTSVKLSEFLGKN
85	2983922	1	out	1	\|ali\|phd\|phdHtm\|	460	4	2	4.00	364	MISGDLKGPGDLLEILSGFP
86	2984173	1	out	1	\|ali\|phd\|phdHtm\|	237	1	4	1.36	71	MVIMLIFASSTGTILPSKKA
87	2984277	1	out	1	\|ali\|phd\|phdHtm\|	211	8	3	8.03	152	MCPLTPVGKYLLLPLWLGVR
88	2984371	1	unk	1	\|ali\|phd\|phdHtm\|	165	0	5	0.00	19	MIRGFFLILLFLLLAFFSEN

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