--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Aquifex aeolicus --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 226 2982907 1 in 86 476 2 2 -2.08 167 MIEKKMLIGGEWVDKEEKIE EGPKFAIEDYTEIKTVIFDL 227 2983828 1 in 33 120 0 9 -0.87 39 MSQVTQSFRKSLSLNKGFTL GVSVTCSVQNDGSITCSEST 228 2983533 1 in 18 303 3 4 -3.49 285 MSTLTTGGTVGLGIKRLSAS QLILWGPIKVLGGKEEKSEE 229 2984114 1 in 17 132 1 9 -1.24 37 MIIVRSMEEKEISSMNVIPL KVFDLLNQYGFKNVNLLVKK 230 2983364 1 in 16 335 3 3 -3.52 100 MRTLAVETSCDETALAIYDD APLDVNPQPNIPLEEFGRIW 231 2983462 1 in 16 256 8 4 -8.92 23 MRKQIVELFLIILAVLFIRE QIIYALLNPRPSRIGKPLID 232 2984316 1 in 15 510 4 2 -4.80 164 MAEEKSEVLLKIQEKYYPPK TIKGVWRPSLLRRRRVHNDP 233 2983827 1 in 10 119 4 9 -4.22 29 MPKEGGFTLVEVLVALMIVL VGEVRCTYDGNTGEISCDST 234 2983183 1 in 6 578 9 2 -11.79 37 MEYLRVYQKRERVFKRRVIL PYFKEIIEKIGVIYGVKRDR 235 2983507 1 in 6 235 9 5 -17.50 38 MAYKKKEECPKPPAWLTSFG NDTPQGRQKNRRVEFCVKLL 236 2983555 1 in 4 374 9 3 -16.57 25 MKKYIGVFTVVALIVGFGIY KGDLSLLRVGMGGEVEIRRT 237 2983829 1 in 4 145 1 8 -1.12 29 MIVLFKRGFTLVELLIVIGI GMSYKVIVNREGIRVEKGGT 238 2984234 1 in 4 133 9 9 -9.35 39 MNLRKRLRFREEERAYIDVV VMDLARKNGIENVIIAVRKK 239 2983518 1 in 3 452 3 2 -3.00 154 MKSLLRQIPQISKVVEIFKK RTVFHEDLKTIKKTLQELLS 240 2983830 1 in 3 143 9 9 -20.00 58 MGKLLYFKRWNVVQGYSKQG ASYNTISFSLTTKKCDLGAS 241 2984335 1 in 3 173 4 8 -4.79 37 MERKLSQRAGNTFKGFTLVE EGLPPFVIVELNSKEFTFKV 242 2983109 1 in 2 170 9 8 -14.04 28 MLRKYFWLPVIIGLFAGLFA LKESEKRKALAIGSGQSSSY 243 2983508 1 in 2 224 9 6 -15.54 38 MAYKKKEECPKPPAWLTSFS SVLIERNNRVEINIYVKREK 244 2984103 1 in 2 162 6 9 -6.68 23 MRALIAFLIGAVIALSIFYF EANLIINTYRNLRKTLDEVR 245 2983073 1 in 1 272 5 4 -5.47 234 MSERQNTGGFKAASLDEALI MARRLLGVHAPIRYTDVEEV 246 2983174 1 in 1 216 0 5 -0.67 24 MRGILGLVFGSVILIYLISL LHPDAKIFDIRYKGFILLNE 247 2983223 1 in 1 437 9 2 -19.27 29 MFGLIQKHKRIAVIIVTLAS LFVEKLIKEYGVKVNEQLAG 248 2983226 1 in 1 278 9 4 -17.33 24 MKKFLIILLSFVLFVFPEDL DNYYKIMERNLKVLKEALKC 249 2983278 1 in 1 374 9 3 -16.57 25 MKTLIKYMVFLVIPIVLIIM PGERIVVEGIERACEGCRVG 250 2983391 1 in 1 392 8 3 -8.00 219 MEIVQEGIAKIIVPEIPKTV MKKMEELKEKQKEFLEKKKQ 251 2983564 1 in 1 416 9 2 -20.00 138 MRFSIRNVSEQEVKREIRHI FSFQKLKYYYLDYAVIGKKE 252 2983810 1 in 1 321 3 6 -3.67 309 MTQWKRRSRRKGMRTRNNKQ KLLLLCLNLLRITWASSRFI 253 2983994 1 in 1 321 3 6 -3.67 309 MTQWKRRSRRKGMRTRNNKQ KLLLLCLNLLRITWASSRFI 254 2984212 1 in 1 160 7 8 -7.00 26 MVIGRKAGIIIYVMHALLLL GASLEGCYGEVFAEGYIIKK 255 2984258 1 in 1 223 9 6 -10.00 101 MPELQGKPLRFYLLRLTTTL VPNSWITLIELQNKGFAFVP 256 2984273 1 in 1 392 1 3 -2.00 264 MDLLYRHPILDGRKELFGFE TEDKMREAVKIAKERVENFT 257 2984314 1 in 1 368 4 3 -4.00 290 MFKVLNVVDGIGWCGTKEQT NYSIENTVDKYIKLFEELKK 258 2982855 1 out 13 217 1 5 1.44 126 MKFFLDTANVEEIKKAMEWG LTDIGLERFLKDWEKVPEKP 259 2983432 1 out 13 253 9 5 12.20 23 MEFLPLPPIFIAILVLLFLA TVIFPFPLELVEFMKGRKSN 260 2983159 1 out 10 178 9 7 19.21 63 MNTYATAPAIKITRVSSITL EESFKEEILKEGKVWIDLTK 261 2983426 1 out 10 265 2 4 2.32 138 MSVRVVVCGALGRMGRRIIE AAKWIKGKEPGFYTMFDVLG 262 2984050 1 out 9 482 2 2 2.16 307 MGSNPTPSASVLYMDLSFIL PFSDAQVVKEILGGDGCIGK 263 2983375 1 out 8 445 8 2 8.04 287 MQITSQTLAKILKGSLVGSP GSRGMKLEEVVDFLRGMSNA 264 2983572 1 out 8 309 6 3 6.72 122 MGTKIIGTGVYLPKNVLTNF DLILMTAMGGGLTWGAVLLR 265 2983354 1 out 6 328 1 3 1.84 204 MKKVNVVAIGGGTGLSSLLR DPQKLTEVILKILENELLSK 266 2983647 1 out 5 457 9 2 13.36 336 MLRAEWVEKRKRFKNKTQMH QKVQEKVSPEELIENGNWVA 267 2983702 1 out 4 102 9 9 27.20 28 MEQQSPVGALLFQIIFLVAI FSKEAIVAYQPGYEKKEEKK 268 2983625 1 out 3 344 5 3 5.00 269 MIAVSGGGTGGHFFPALAFT ENIKKFFAEGAEERMYEELL 269 2983353 1 unk 2 326 0 4 0.00 21 MRRFLILLYVFLVSSVLGFI GHLFAETYLEHLRNMRRVGR 270 2983834 1 unk 2 584 0 2 0.00 19 MFALILAFLIMFLSFLPFHL NVFPTVWGWYEPYRVYLISD 271 2983867 1 out 2 262 9 5 16.00 24 MYLVYALSLAFTLSVFLSVF PNLKVELIRRGKREEINVRI 272 2983901 1 out 2 300 3 4 3.67 30 MHTVIEGRVNYILVGLFILL KNNPSQMLEIKTIKPHEVEE 273 2982807 1 out 1 205 8 6 8.00 23 MNTEIIVLFIIHFIMINENV LSVRNAVAIILDRLFSRNRC 274 2983143 1 out 1 253 1 5 1.13 64 MQISLSFTSSSIPGRQKLGT EFKTIDRIFKQGSARSPRYF 275 2983193 1 out 1 267 9 5 14.44 46 MSSFASFLDMWRDLDKYLSS VKKTEIPDYIYKLPEGYTKI 276 2983581 1 out 1 350 8 3 8.00 259 METTIFQFQKTFFTKPPKER LRDFLTSRLEREVVKNTSHG 277 2983697 1 unk 1 288 0 5 0.00 20 MILILLFLLINFLFAERVFY TDGSLFVNGKFRDFFEYLIL 278 2983716 1 unk 1 281 0 4 0.00 18 MILVLVLGIILTLSFYAADL KTFLTVVYDRDGNKILFKEL 279 2983837 1 out 1 276 6 4 6.44 27 MNRGMTLIELLVALALSIIL TFVNRVGNEEYTLTKDIVLG 280 2984186 1 out 1 345 9 4 24.31 44 MEAQAGFDTFIEATRYLFRG IGQFILEEQRKLLKAYKEGE 281 2984352 1 out 1 216 6 7 6.05 60 MANKRKEFIKLNLNKERKAF RVCIEPDYERLLAEKGHRKE