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Transmembrane helices for aerpe (Aeropyrum pernix K1)-- Low Reliability Report

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

You can get:

query the result pages for Aeropyrum pernix K1
display all results sorted by the number of membrane helices predicted
get explanations of terms used on page
get explanations for the column names used in the tables
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Description of Aeropyrum pernix K1

taxonomy: Archaea; Crenarchaeota; Aeropyrum
Aeropyrum pernix K1,the first strictly aerobic hyperthermophilic archaeon,was isolated from acoastal solfataric thermal vent at Kodakara-Jima Island, Japan. This microorganism, which is a heterotroph and a new member of Crenarchaeota, grows optimally at 90 to 95 degrees C , pH 7.0, and a salinity of 3.5%.
The total number of ORF of Aeropyrum pernix K1 used in this study is 2694.

Attention

This is our high coverage report. The threshold for transmembrane helices is lowered to get higher coverage, so the reliability decreases.
This page only covers those proteins that are not detected by our normal threshold (shown in our high reliability report).

Link to full data

click on ASCII to view the ASCII results (faster loading)
click on HTML to view the respective pages

nHTM HTML ASCII

4--6 HTMs HTML ASCII

3 HTMs HTML ASCII

2 HTMs HTML ASCII

1 HTM HTML ASCII

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Last update: Nov 30, 1999 Contact CUBIC WWW administrator:
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