--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Aeropyrum pernix K1 --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 5104456 18 in 87 818 1 0 -1.48 48,89,127,177,217,268,299,333,366,404,439,481,603,658,699,734,777,815 MMCMVSRLRGFLAWVYRWIT GIYWGIVEIVWTLVFPLYYL 2 5105832 18 out 1 731 0 0 0.81 45,92,127,157,180,230,344,396,422,445,471,512,549,571,613,646,678,720 MGSDRASEVIRRVIGERDLL VVALALASYATALIYTRRSV 3 5105094 15 in 79 708 0 0 -0.62 33,69,116,152,174,227,267,304,348,418,460,495,546,590,698 MGVVVVAVESSVLNLPLMPW ALAAYAVFEDKIGPLIRILG 4 5105975 15 out 1 999 9 0 10.97 30,60,108,133,184,208,247,270,301,355,395,433,469,507,984 MSSLVGLHYATVLPLAAYLL LLAMASIHFYLGFRQGRLID 5 5105861 14 in 5 604 7 0 -7.55 24,101,153,182,207,252,281,321,364,431,479,519,549,585 MSMPILLLVAVILAIYAVAY LFIINFNKLSKQAGASQQAQ 6 5103419 14 in 1 487 9 1 -9.73 37,72,101,124,160,187,221,255,299,333,358,392,431,466 MPSLSPGEESRIHLTTKALS MVLQIDEPSLLKDLSPSRVL 7 5104859 14 in 1 770 7 0 -7.43 26,75,104,132,162,203,228,257,311,333,368,414,451,767 MINLLRKFIIILIIGIIYIL LSLIMLKVLMFPGGIYLVII 8 5105093 13 in 11 468 4 2 -4.02 40,67,101,144,190,216,255,288,320,346,392,422,463 MDSGVVAMVSPGLVGNAVMA LAALITTVIGLAAPLIVNSF 9 5104641 13 in 1 460 3 1 -3.41 49,71,111,155,183,223,269,317,339,367,391,415,453 MARGEGEFYLAGRRLTGFLS WVLAISLALTAAGIALVRGR 10 5105310 13 in 1 548 9 0 -10.25 35,80,115,150,194,238,266,302,355,392,422,475,533 MSGGKVSFSAEDRFTKVTML YIGPLYEIFARGLVPVGPVP 11 5105056 13 out 2 453 0 0 0.61 63,93,131,153,175,198,223,264,308,349,380,410,448 MVEASFGYEDFIVRMATGLL MSLLPVFFLILFWLLLQTPT 12 5106248 13 out 1 560 0 0 0.01 45,93,159,194,251,279,317,340,386,431,460,487,550 MVPYTVFLALLALYIRGGPI KIYIAARTALVIAGIVILVI 13 5103398 12 in 2 538 9 2 -9.42 40,63,110,146,175,208,245,289,341,363,395,419 MPGLSARKGTEKLGFWEVFS LHIHTVTRDKLENFKHKVKI 14 5106118 12 in 1 480 9 1 -11.96 41,86,131,160,211,233,288,311,351,389,422,450 MSWWKLDREALDRKRTWVTQ RVPPEPLGEKPPAIPEPAIN 15 5105098 12 out 106 513 1 0 1.47 49,97,148,170,197,241,277,309,362,409,450,497 MELGFPLLWLSLVLPVLASL AGPMVTDLAASSLAMVEAFL 16 5104670 12 out 4 390 1 0 1.47 35,62,118,149,178,200,228,250,274,320,345,369 MRVLGGAAAPLTSRLYSLAA LDRAYKEGGSRGEQGQAGRQ 17 5106243 12 out 2 559 1 0 1.57 36,89,129,176,228,295,337,371,413,435,460,525 MPEDKRFSYITFPLLPPLLA RLVGLPSKVPNYAEPLEREG 18 5105413 11 in 72 571 2 1 -2.42 56,105,138,201,259,334,366,395,458,522,570 MAARMFVRKAWEWIYERGGL DELKVHFLPYLALALAVIFV 19 5103546 11 in 2 363 0 1 -0.10 28,53,94,127,160,184,220,249,288,324,358 MAGGLLAGNLFDTINMVVIS SLVDLLGVVSLSVVAWILLS 20 5105531 11 in 2 385 6 1 -6.28 44,72,108,130,162,191,232,254,277,301,358 MHAKIVEKAILRVVLEIGLP NIIPRAFRVEGGKQQSATTG 21 5103443 11 in 1 430 2 0 -2.39 32,69,117,146,195,247,269,300,349,390,428 MDLVAALLFTLTIMLVVSRY SLTFAFTSLIIHYIITLIVW 22 5104134 11 in 1 504 4 1 -4.91 51,76,123,166,194,240,314,367,426,456,493 MGVMNESGKTIMVGKLPVGF AMLYWGFFATLGWMERFGLL 23 5105418 11 in 1 555 1 0 -1.91 67,102,128,150,203,251,303,361,399,484,541 MSIDYPLGGLLDYPFVSKRP QVAAITFVNVALKQRYAFIG 24 5104196 11 out 6 385 3 0 3.81 29,65,89,112,168,207,245,284,306,335,365 MKALRGSAAKLSLSLLLFWA ADHSTAPRREPCPRRRQGPA 25 5104848 11 out 4 411 9 2 10.59 52,82,130,174,208,250,282,312,338,360,383 MAATILSAGLPPAAARETAA LNELAQLIKNTSLRQETREK 26 5105463 11 out 3 423 9 1 11.78 52,94,129,161,190,232,270,312,352,386,412 MVADSALSIAWIVDTYFVGG RAAAIVFIYLRYYTRLARRV 27 5104329 11 out 1 383 9 0 9.76 63,90,125,149,171,224,254,280,310,339,372 MDRGGVLRVAAAALPAYAYF GTLVSGLIPLTLLASPRARR 28 5105065 11 out 1 450 8 0 8.73 63,129,153,181,218,253,293,336,364,408,437 MGLGNTPEKGGGLGALEYTF VIAAALLLKLVPAKVKFKNE 29 5105970 11 out 1 369 9 1 11.34 51,73,99,137,165,216,248,276,304,333,359 MFSSQAIWVTYSPVTSLVAE TFLAVLSTIAFAIALLLPSD 30 5106130 11 out 1 412 6 2 6.73 34,74,97,138,179,230,279,319,346,381,403 MGWLQDGINSARVNNLLALA SVLVWIVVGTILGSFALVKM 31 5106289 10 in 25 421 6 1 -6.23 28,60,98,155,207,244,266,324,358,386 MFRRYIEIPVLYKIAVGFVL GTTIVAKTENAVDTKKGVWS 32 5104185 10 in 13 287 0 1 -0.79 36,80,102,125,147,171,193,220,255,280 MTPKPEHIAGAAAILLLVLG GLILMLTYLVVLLHSGVWRS 33 5104924 10 in 7 871 1 0 -1.72 60,243,445,505,545,634,702,747,803,853 MPLYTSIVTDIFGWALAGGG LPAATSAATAREADIARALR 34 5104894 10 in 5 370 4 0 -4.46 57,79,111,133,159,185,220,285,307,346 MAAQSGRGGSRVWRGEAFQV AVQFRPEGVVGTRGLAGPRR 35 5103590 10 in 2 418 2 0 -2.96 43,122,173,202,226,260,307,329,362,388 MGMKSSLTDASGMRRLSYAD DKHAPSPSTEGYAPEASPKG 36 5104376 10 in 2 519 9 1 -17.10 50,82,114,191,235,286,327,383,449,506 MGRPCVYEPRRGVVHPLPVR LEILPYIVAAKYLVESVRAR 37 5104023 10 in 1 369 9 2 -9.78 25,118,161,183,232,255,278,300,331,355 MRLAFGLLMASLTAALAVAE LVLGLVLSAATRLKNAGVRW 38 5106171 10 in 1 395 4 1 -4.58 30,56,79,111,154,176,221,281,304,365 MAVAAYNVFRGFAVGGYMAL RAEEEAVVKVLAPEPVKSWD 39 5106205 10 in 1 1172 2 0 -2.95 23,692,714,782,813,868,1021,1064,1116,1150 MARYHILIFIAWFIVTALLL RFWWPLARGRKSGGAGKVER 40 5105671 10 out 7 706 0 0 0.57 42,114,136,182,205,249,278,338,367,421 MSSLSTALRGLLGQLYQRIA SETAERIEFYAEIAAVYVWT 41 5106322 10 out 6 388 2 1 2.38 32,68,106,169,195,241,268,300,322,371 MGVLWFSRGVVVVSRGVVVF ALLAGGGGAVAMLGLAKKQG 42 5103526 10 out 1 379 2 2 2.17 34,56,103,149,196,223,271,295,338,372 MCNVAELFIPDEPIIEVTAV ALLLAYFIVIEVLDIHITLS 43 5106314 10 out 1 404 9 0 9.95 55,83,139,201,233,270,316,340,364,386 MSVGEVFGVFPEFGNILPNE LWIFPWNGEFASRWDIVGEG