--- -------------------------------------------------------------------------------- --- --- All proteins with at least 7 transmembrane helices in Aeropyrum pernix K1 --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 44 5104652 9 in 12 494 9 2 -10.52 85,129,171,201,231,285,330,388,457 MIQRVPLCQRGDTQFLTSDS TRERALETYPLLRRILGEEV 45 5104352 9 in 9 478 2 1 -2.53 59,84,123,229,253,294,331,407,442 MAARLSALKMRGRRLLHVRL LYSLAAAALAYAAAGAPAPA 46 5103453 9 in 4 311 1 1 -1.33 33,62,94,120,145,184,238,264,293 MRRTASIGVAVLSTIIAGIM SSLVLLLQSIALTVYMVARR 47 5104933 9 in 4 439 4 0 -4.42 46,97,206,258,280,321,354,401,426 MSLRRVLPLFVVKELKEVLR SGGGGLISSLGLRGWRARPR 48 5104981 9 in 3 349 0 0 -0.34 45,70,93,120,142,186,241,280,325 MVDWMPAGVFKESYEADMAI EGLIAVLRRVKEYFRLWPYS 49 5104634 9 in 1 269 9 1 -14.81 42,67,94,119,157,180,211,240,269 MSDVLVRKASRDISPAGILF PSKKHVVAALMSVAAVAIMF 50 5106242 9 in 1 311 5 1 -5.66 23,51,94,116,142,175,204,236,272 MSGWEYLVLALAVANVSTAS VLYEENRVKKEIKQGLASEG 51 5105104 9 out 69 383 9 3 9.03 41,112,147,190,220,273,310,350,377 MFGGGGCSVSVLDVLLAIIF KYLLLIYSPRELLVLDYISG 52 5104895 9 out 9 311 4 1 4.86 29,69,112,136,167,191,224,253,278 MINYCSNIYYCWHRHIPRLI EALEEARTVLDILEGGEREQ 53 5106085 9 out 3 412 3 2 3.79 48,97,139,177,232,297,325,351,398 MGSLGDESRRPFLEAFGEAL AGIVNLFIPSGGGEWAAIGE 54 5103464 9 out 2 296 7 2 7.04 41,76,120,152,182,209,239,273,295 MSVGVWLYGCGCGMDRRSSE TALQALGGVLILAAALGASF 55 5105161 9 out 1 308 0 0 0.03 56,90,125,155,197,225,247,275,300 MVVGSILWMQAMELAVPAVA LLTLLLSLLLPLYVSTVLGH 56 5106180 9 out 1 353 5 0 5.72 48,83,105,141,178,236,258,294,340 MRAGSTMSGLLVAAITTTSW MLGAFFLASSKISLSRCSLS 57 5106228 9 out 1 332 4 3 4.73 45,71,100,122,188,236,272,294,318 MMLSGTAAASVKEFARYYLY LLISLFAPEGVLGYIRRRWK 58 5103575 8 in 7 412 5 0 -5.73 27,58,93,115,155,177,235,311 MQAPLLVLAALNGLSFGVIV GRAWGSRRVAGELLEEARAP 59 5106293 8 in 4 376 0 0 -0.24 50,80,129,165,229,276,319,359 MFSKGVRLLLRSWGCSWVPR LSGLRYTGIPRRLSSIAGRL 60 5105606 8 in 3 372 2 1 -2.22 47,73,133,158,198,243,266,362 MDTAFLLGVVAAYAEHLGAS TLLLAALSILSLKMVGAGSP 61 5106284 8 in 2 283 8 3 -8.31 42,102,133,162,191,216,239,275 MAEIIVSTLILTKREIIKWV VLTLFLLAAGYTLAINGVKE 62 5103460 8 in 1 345 9 1 -16.45 26,69,102,135,167,210,239,333 MARLTNAIPFIAVSIIIADL ALYTIAVLAGVEIARRSSKG 63 5105320 8 in 1 288 9 3 -11.14 44,88,122,155,179,209,233,277 MPLSSLLQDNRVKAWLLLSP ALLSASIGVVYIRVFRETLL 64 5105954 8 in 1 276 9 1 -11.54 59,81,116,148,193,215,237,260 MRNWNVDAYLFDIVGLYNYK GLVTLRILGFQRMITRPRGD 65 5104723 8 out 20 308 1 3 1.44 56,85,109,140,184,234,270,296 MFSMLTLASLALGPAGVKNP LIGVPILVYAAVERWRGVEA 66 5105569 8 out 6 256 6 3 6.44 41,70,95,133,166,192,223,253 MPGLGIPLGDEDVRELGAPI LLVDKRRLGLALRILLMKTY 67 5106195 8 out 4 279 9 0 18.05 32,63,95,135,169,196,249,273 MLNLSEALATGLVAFREAFE GSTLLLLLAYIIAAYKPFGK 68 5104591 8 out 2 354 5 3 5.67 31,55,106,144,198,251,303,341 MVDVKVVFDMLAYSGVIALL QGLAALYSEKIQARLPRLRG 69 5104593 8 out 2 390 9 1 11.34 35,59,121,147,193,245,289,343 MVAVPSVDITFLVEFIVAYV QTGSETPQGEEEPPASDTEA 70 5105379 8 out 2 269 8 2 8.39 41,78,100,145,167,197,226,269 MSPVLEVIAGLISGIAGGNP LATVGFFAGFIIMLYLDTAL 71 5105587 8 out 2 537 7 2 7.58 43,193,218,260,288,434,484,523 MGLVLLGLPVAGGVALLMEP VEIIDFVIGSIVVPQDIVPQ 72 5103549 8 out 1 282 8 3 8.33 33,55,111,148,170,220,245,281 MKAAIEITRPVNSLMVSLAI NRVLGYMLIGLIAFALGTLG 73 5103594 8 out 1 267 9 2 13.12 23,58,97,128,156,200,228,261 MYLMNPAITPILLGLVAGIT LFLGIALAYVTESIILIAGL 74 5106292 8 out 1 301 0 2 0.13 30,63,85,115,157,198,244,285 MEVVLEDLTSLALLAASAMV TLVALRKPRMPAWLGRPYIK 75 5105974 7 in 35 399 2 0 -2.13 39,219,260,288,350,372,396 MVVCVMDQSGGLRLGGRSSL AGYLAVSIGGVYMLAYSLGV 76 5105078 7 in 19 336 9 0 -9.27 35,124,164,221,278,300,326 MRVGVSNLTRFLVRRLLTFI YLTVNLLVDITYAIIDPRVR 77 5103942 7 in 18 342 8 0 -8.91 29,117,155,224,283,305,329 MLIKYIIYRFLSAIPTLFGL IVVNLAVDILLAYLDPRIRY 78 5105321 7 in 16 270 2 1 -2.79 33,91,128,157,207,229,256 MVSAPAWIGELARYAFLAVL ALVFMFLARRYLVTMWAMAA 79 5104624 7 in 5 295 4 3 -4.55 61,88,121,144,183,211,241 MSVERWVFPGCSVMARFRRG EEFEEFVRTLKNLRRLENSM 80 5104584 7 in 3 315 2 4 -2.32 57,87,161,195,225,267,309 MSSLYKDLTTAGCYPYFSRE ASTLIYTLLLVLTLPLPLSL 81 5105570 7 in 3 305 4 1 -4.63 42,70,129,158,187,249,299 MGKMVSSTAGYRSSALGKLK IAVVFIILPLERTLVYTLLL 82 5104612 7 in 2 257 6 3 -6.97 35,82,116,147,195,219,248 MLRSSSIAGYTALLAAPAAL MVTLLSAAAAYLVFRQAYRV 83 5104982 7 in 2 294 2 3 -2.08 39,72,113,158,209,240,283 MAGLLEQWGNLVFQGVLMGL LFLVLLVKPYGLFGSERIER 84 5105064 7 in 2 310 3 4 -3.08 48,91,142,179,208,251,302 MQAMAWEEAKAILSYEVLRL LVTGTLALATINLALLRRLE 85 5103520 7 in 1 332 1 1 -1.36 44,72,112,137,166,244,277 MSGITVVDLEAVTRTIVDIA EYSLRRLDEVLSIVVRLFWG 86 5105235 7 in 1 361 4 3 -4.76 38,181,228,262,284,323,351 MSGGLMTIYSLRRSPSVLLW ALAGLVGILSYRRVMALAVE 87 5105850 7 in 1 500 1 0 -1.57 30,148,177,324,359,382,420 MGKAGLKRFLPLLTTAGLLL GPYLVVKKAEESVEEDEAHT 88 5106219 7 in 1 275 1 4 -1.79 45,85,116,139,174,219,259 MSIIYHVRVAKAVALRDFKI GILFVRWAESLAKKYGWLHT 89 5105138 7 out 46 835 9 0 10.87 209,244,266,422,454,767,789 MTLVKEKLSIKGMHCATCGL SKEEFERITREEKALAAGRQ 90 5105079 7 out 17 387 2 0 2.53 77,168,205,227,258,314,362 MAGEEVYEKKLLDRVADAIV ALRDIMDPRTRRRIEFKVKG 91 5105853 7 out 8 255 5 0 5.57 34,59,88,136,170,212,235 MRLRKVAIAFAVASIIVPLI VWFGAKSRKSGEALAGTGLQ 92 5103600 7 out 4 383 1 3 1.98 25,83,135,164,204,325,375 MPVLAGIEIAVAAGIALAWI GVATLILVLGLVTIEPIDLT 93 5103574 7 out 3 270 1 2 1.67 47,73,127,177,217,242,269 MKGLLTLAPLDLSLADMALR TDALRPIVALVLLLVALRLL 94 5103455 7 out 2 281 0 3 0.30 20,73,104,140,189,227,263 MVEIVISAVLTTLIPLSLAA AGTHLYERIGLRPPASIWRR 95 5105257 7 out 2 284 3 3 3.30 43,107,145,176,219,245,279 MRLVRIEHTIFSLPFAYVGA VPIIIGAGIIVDMLHHMIRL 96 5105517 7 out 2 272 3 4 3.67 50,75,98,127,166,201,253 MLGGISRILTQFTVMVWAHS VTRYVAYRDYRTMGPRGVGL 97 5106227 7 out 2 265 9 4 11.53 46,88,135,186,212,234,257 MGLAMIWGVMEIINFAHGDF AFLLFILIIMIKPTGLFGRG 98 5103392 7 out 1 304 2 3 2.15 32,71,155,202,239,268,292 MRIEIDKRHYIGLAVFLTVS VVSMLIVGFLIKWWVSRGSS 99 5104868 7 out 1 267 1 0 1.19 67,102,125,169,202,224,254 MSLGDLGLPYLSAVFMSGLI AMLKAVYRLTLEYGVLGRVG 100 5104975 7 out 1 244 1 3 1.43 27,61,97,119,150,185,212 MAAPVLVAVYLAELIFNRIL SSQILAVSSLYLLELNRGRW