--- -------------------------------------------------------------------------------- --- --- All proteins with at least 3 transmembrane helices in Aeropyrum pernix K1 --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 207 5106027 3 in 42 131 4 9 -4.71 48,83,127 MVKTGFPACWRGKRISALRQ VLGEGIAIYGLLIALLLLLV 208 5105270 3 in 17 930 6 0 -6.42 41,694,927 MEKRYNNDHMVGELIMRTSL AAIIILIILAAAAFFYLRRQ 209 5104068 3 in 7 373 5 3 -5.46 284,306,355 MSCRRRLGGPSILSKPPCGE ALGIGAGFIVNFTLASRYIW 210 5104325 3 in 5 395 3 0 -3.03 59,141,318 MPLPRVSPVPLAGPGRRGEG SEYRRSVRSLLGLPDRGAGR 211 5103559 3 in 4 407 1 0 -1.75 259,297,346 MRSDMVDYDRLFSEITRRFR TEEEIPEGISILSKLVKEVL 212 5104133 3 in 4 119 4 1 -4.04 56,80,119 MKSPHSTAADTRPWSRAICR GSFPTMMVLPDSFITPTLLG 213 5104636 3 in 4 124 0 1 -0.10 49,76,98 MMMAAATAAPSIMRELSRRP ARSTAIILIPSIPGTAWVRI 214 5104241 3 in 3 912 4 0 -4.36 40,865,894 MLPLWTRRLGAMGSLKARAE VAIAMVALSVGLGLIAIRRN 215 5104780 3 in 3 161 4 4 -4.79 78,105,127 MSSPFFTWKPRAMTLGGPSN PSCSLGSITSPAVLKGSANI 216 5104560 3 in 2 162 2 4 -2.27 27,115,160 MADFANIFLGWLHILGVVIW VNIAIGIVVILLAVALRYGG 217 5105313 3 in 2 109 0 9 -0.83 29,66,98 MAETPKILAYLGGIFAIIAG CVLSILAIIGGYMMLKKGEA 218 5105730 3 in 2 343 3 0 -3.57 130,182,302 MVKLSTPLRVVTTLPHQPGR DMVSAVVGSLVSRLHDEVRE 219 5105845 3 in 2 405 6 1 -6.30 30,292,401 MKMAWSKRAFKLLLLAWAAT ALLAFIAGAVISAAAVYTVK 220 5103434 3 in 1 140 3 6 -3.73 48,72,98 MASTGQSTDLPTRSSVQTSG PAKSTTPSLKALWPAPLPVG 221 5103553 3 in 1 463 4 0 -4.51 161,209,231 MLRSYFKAIESYGFSVDERA GIILESPYYILAKKERAETY 222 5103580 3 in 1 100 7 5 -7.44 28,51,90 MLFIRSRTSDIIFLDLKLAP MGTGFAPSWLEWWRALLLIS 223 5103624 3 in 1 115 0 9 -0.86 47,79,106 MRSVLVIMPSSVPSGATTGT INFLAWASVSSGLTVYTSLV 224 5104123 3 in 1 121 9 4 -11.41 40,62,92 MQYMSVVARCRWRRLSRTRA RPRKFTARSFDAVALASCWP 225 5104264 3 in 1 1554 1 0 -1.81 25,986,1546 MSIGVRIVSIAIAALMVALF VLSLAVLGVAGYLVLQLTRR 226 5104399 3 in 1 100 3 8 -3.80 30,74,96 MEARARLAWLLWLLLLQALD QAVAANTLSLLKSWVVLSSM 227 5104458 3 in 1 288 3 4 -3.11 223,245,278 MGVYSQRGCHVRQHIQCILL IAILIISAVTSVLTCTPYFP 228 5104490 3 in 1 263 6 0 -6.94 79,109,174 MINRSHETQRQLLTREHRNP VQKTYLVQIAEEALNLCHQK 229 5104527 3 in 1 109 5 9 -5.58 36,69,98 MGGLSVLRLTWYKVLPLYML AGAVMGPLTLYILVRGLLVY 230 5104536 3 in 1 152 7 4 -7.81 26,103,132 MIRHRESYILSLIVGVLSAS ILNVQKLYHDHFNVDLSSNN 231 5104594 3 in 1 202 5 3 -5.92 58,101,161 MVGPGGFEPPTSRLSAGRST SILSNIETAATELPARSGFI 232 5104632 3 in 1 195 5 3 -5.97 46,136,183 MASLPDAMRMRPFCWSLLRD VRAFSILFFNTISAACIWRA 233 5104888 3 in 1 1374 3 0 -3.69 33,666,756 MGWDKIVIGFPVLRLPYFAP TVTGEAERVESETIYITLPT 234 5104908 3 in 1 139 0 1 -0.82 34,93,130 MAFIRECIGSTRNPRAAIGL PVDPLNAASVYRAFNFYLRI 235 5105091 3 in 1 252 2 2 -2.30 31,142,216 MRRAVYAIGQGFKVAGLFLV PDWGYTIKEEVYVKVVEAPL 236 5105116 3 in 1 156 7 2 -7.33 39,61,134 MALLSSPARSKLSATGMAAI AVLSTNTFMFSSIAQIFLAS 237 5105318 3 in 1 478 8 0 -8.04 36,200,356 MMSSRRSLRRGEATSRYLLV LKQYLLSLFQATGASLPPPD 238 5105502 3 in 1 203 5 3 -5.12 45,77,165 MAPLATAIIDKPAFFMLGAM SSGSQQPPHFLGSIEPSPTN 239 5105534 3 in 1 101 5 0 -5.56 41,72,94 MVKPVCYLAFMSTLAGFTSV LALISIILELTLAVWTCITG 240 5105878 3 in 1 194 1 0 -1.19 39,120,148 MTGITLMSYSYSSCLTWSIL SCATLLVMVQPHLYTQDSGE 241 5105906 3 in 1 213 9 6 -12.32 134,172,210 MSNFLRDIAETRKTGLSPEQ IILIVITLAIVTLGVFLLPI 242 5106250 3 in 1 127 1 4 -1.54 28,50,126 MIGGISWPPILEAVSIAAAF NTPVSNSTLIAVMILSSLIP 243 5105100 3 out 12 102 8 9 8.89 27,49,82 MVDAALSQVVVLLAAVLAAI VAALYRRLGTLETEPLEEEG 244 5103495 3 out 5 152 0 9 0.56 54,99,143 MALKRGGQPRGAGLMRARLA ALAAAALLAAAALYRRCVGS 245 5103664 3 out 5 85 9 3 10.97 29,51,79 MVAEWGWLVAAGFLLIFLGV IIGLVFMILAIALVLLARKG 246 5105562 3 out 5 101 4 9 4.88 35,65,90 MLLSTTCAASWPVAMNIAAI AAGFLSVHMLPLSAMHLASP 247 5103964 3 out 4 111 5 9 5.99 31,60,100 MLLAVVVGAILHLILLFILP LLGLTGLIGGLIGGALREAL 248 5105017 3 out 4 211 3 7 3.82 58,143,190 MPVLLGEFAGRMLVALAVAS ASFYRLRSPPSGGSRLEGET 249 5105415 3 out 3 151 6 3 6.42 32,70,99 MGCEMVEARLLDALYLAALA TIMHLSIILAVASATAKILG 250 5103660 3 out 2 810 4 0 4.18 78,100,167 MHTRVSEREYNVQFYECMAV GKIGSERMREATSKAKAARI 251 5104582 3 out 2 119 9 4 17.36 59,81,103 MCAPPSTGMTAPVMNEAFSE SLIMLLKARSCQGLRSVTLP 252 5104586 3 out 2 500 4 0 4.57 25,339,494 MNVAKIGAVLLALALIAPVL AAIIIIVIVIAAAAYFFLRS 253 5105170 3 out 2 197 0 2 0.97 56,109,131 MASTCTTVYPPLSTRRQADS SRLHLILWRALFRMSMLMSA 254 5105409 3 out 2 254 6 1 6.82 30,84,219 MVSRRTAFIAVAAVLVAFAI GQRQVAETILQYILKLVEER 255 5105468 3 out 2 111 9 9 12.91 33,55,93 MAGTSILSYIIILNPSITLV LGWLSRSSRAVAGFMSLGSS 256 5106159 3 out 2 283 9 2 10.91 44,81,110 MPLADYLEALLPSYESLIEI NHSITLEEQEGYEQRWGATL 257 5103404 3 out 1 138 5 4 5.00 27,92,115 MTANFTSLLALLMQASLAIT TAINYPERRAVFSYRSARGW 258 5103492 3 out 1 262 4 1 4.50 49,110,210 MGLLNSSIVYREEIYGWEFL TKAVMARMGKEMEYRAPILY 259 5103608 3 out 1 138 2 0 2.50 42,82,120 MAVLDFPPAVRRWGVVVWPL LSFPLGSRRMVLAPALPTTR 260 5103944 3 out 1 216 6 5 6.92 39,81,203 MYVVPLSLISHLSASQGFIS VSTAPLSSLTVRTTIYDPGS 261 5104075 3 out 1 174 9 4 12.67 32,80,167 MALELAVDWRIDNILEAIIL LLLHLAANITAYLLGLKKVP 262 5104100 3 out 1 388 1 2 1.11 39,75,134 MALALAQLLRSHCRVLSSLP HGLASEPIEPGYQHSPPPRA 263 5104390 3 out 1 203 8 3 8.48 121,158,190 MTPSAGACSTMLPLVLKNRI MLSLRPARALLSLPIKATAS 264 5104508 3 out 1 929 0 9 0.57 776,883,912 MAALRPGPVLILLLVVLSTA AVLGLAFAAAGLGLIVMRKR 265 5104513 3 out 1 168 9 0 16.67 122,144,166 MGRQRVLRREERGRASGGCC MLVAALSLAALLWQVWRAST 266 5104710 3 out 1 207 6 6 6.88 105,146,183 MQIARRRAAEEGDSSWRVVA AYSSYTRRKFYRMLRMLERG 267 5104711 3 out 1 143 5 5 5.30 36,100,122 MEPRYALLVGLGLGLGLLES GGYLSLAITAVVGGGVAVVS 268 5104955 3 out 1 135 7 8 7.72 29,64,128 MASRGALSYISALAGVLGFL GLLLVFLVALTLYYVWRLRR 269 5104968 3 out 1 198 4 1 4.38 37,88,188 MGVSCQRGLATMSSTSSGKW GSFPSLLASAARSSVLLLNW 270 5105052 3 out 1 159 8 4 8.78 38,76,102 MSGLFVAPMTTTFESGCIPS RACLASSRPPISLHLTSGTS 271 5105113 3 out 1 140 9 3 16.14 34,90,119 MVLGLIETLYSPGVMMLVAL YAPLLYYGIRESRRLEAWIL 272 5105214 3 out 1 114 9 3 10.22 52,74,105 MTMVVGLAEITAGDIFTGVL IAATPFAASFLVGFSLGFKY 273 5105222 3 out 1 168 5 5 5.06 48,110,150 MLTRTLSPRFSAIHLSTGLV LAFHWLTSQFWQKTQVKLHP 274 5105231 3 out 1 131 6 9 6.96 27,91,124 MALSYMLLQLIHVFAAILWA FTAAVLTAALVVVGSMLRFG 275 5105285 3 out 1 120 0 9 0.25 27,51,100 MPSRTELAMASISLLASAVT LLPLPVAPSSPCSALVPVTV 276 5105360 3 out 1 113 5 9 5.17 39,61,88 MATLGGYITGKPITLPMLPT SELTRGYFLIAFATALNTKG 277 5105436 3 out 1 181 6 2 6.30 39,102,137 MYFSGSVLLGSPTSMVLSCS LCSESLAWRHRPRGTSRTPC 278 5105467 3 out 1 385 0 0 0.54 218,337,364 MPVIEGVLYDFAKMLRQGRK YTLTYKMYSPLHAKWNIKLN 279 5105548 3 out 1 161 1 3 1.75 41,84,120 MASTNLPLIAPSFPAISSRS TSVSGATIPSASSFAYAAAP 280 5105652 3 out 1 400 3 0 3.06 105,177,339 MYRQAMVMSGGPLDRHLTSH VSDIDKIIEHILKKRDIEVC 281 5105833 3 out 1 123 6 1 6.54 46,68,90 MAGRRAAITTMPYGMPTNSA VIYFPTPSLSRNELKNRNMN 282 5105936 3 out 1 244 0 4 0.65 36,92,140 MYRWGLPLPILEWRWPGGFL AVAEVVTPAGFKTEAHAVEY 283 5105976 3 out 1 745 0 1 0.58 30,206,739 MLKAFGGASIALVTALLLLL GAIAIIAGLVIATGVAYRIL 284 5106139 3 out 1 255 6 3 6.00 40,125,158 MSMYLDRNRILMSQAFIILY RLYTIIERYGLGSREPRQEG 285 5106167 3 out 1 108 9 9 13.70 44,67,96 MGFAVVNCSSVYDIPEAVVF HISILLAFALAIVGLRIGGH