--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Aeropyrum pernix K1 --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 286 5105401 2 in 27 394 3 0 -3.95 228,354 MSQQPECRVEGNYIIVPKGL TEKYVGPTGLKYQPIEERCR 287 5105561 2 in 25 421 6 2 -6.15 311,402 MGSSSGQKPRRLEDLVDKLA IAAGQLARAHELLGRGGLKI 288 5103437 2 in 9 102 5 9 -5.75 42,89 MLYGSSFMTFMLFIQTSPST TRASPPLLLVSLRRRSLGLS 289 5105478 2 in 8 161 8 7 -8.56 87,123 MPSLSRVCLSQSPGTYSPWS FSNMSSKTGLLRSRETLWFK 290 5104987 2 in 7 529 7 0 -7.94 120,272 MKYLTHAVATRVWCEASPAK VSFYKKIRRVEVEGYRYSPA 291 5105753 2 in 5 302 2 0 -2.02 151,191 MSFMPKALRVAVVQPAPVNN RHRAAVLVDSRRPHQVGGQT 292 5104516 2 in 4 134 3 8 -3.90 49,115 MRSIARPTISAAIARVRPVP VTPVPPRDWAMSITFMYSCG 293 5104614 2 in 4 407 9 2 -15.85 31,397 MLGVKRAILAGVAAGLVIVA VVVLVVAAAFLYRLSRGRAG 294 5105112 2 in 4 146 6 1 -6.26 32,63 MAIANFGWGICSHVSLTAQA RPRAAWILLSRSIGVGRRSV 295 5105486 2 in 4 160 8 0 -8.54 36,158 MPSASRLAKTLQLVSTLLIV GIPVKIPYIGIVKILLESLY 296 5103659 2 in 3 121 6 9 -6.29 65,105 MGADTRLPLTELKREVNKLL LAILIRHVAMLRRIGKRIAQ 297 5106279 2 in 3 238 9 2 -10.00 216,238 MLPTATPRSLAARASRSLTP AASRLLPPLATMPLVARVAI 298 5104587 2 in 2 113 3 4 -3.66 69,104 MSALFIMTAPFNPRSLARAP GFVCVSSTLRSSLNHAFLLS 299 5104717 2 in 2 228 0 0 -0.89 119,155 MGSLEVLAEVVERLCNRPGE GVEPLRLYRRLFLGEVLGGD 300 5104798 2 in 2 173 2 2 -2.31 57,100 MEEPPALVALVAPGLFVAAV VGPRGGYYILSHDPASRGVI 301 5105775 2 in 2 126 1 1 -1.34 27,115 MKVEPLQCVLSLILALALLR ALASFLLLATTLSMEFQPPV 302 5103393 2 in 1 157 2 1 -2.99 52,110 MTLPRSLTFLSSMVKRYPLQ LFRGKVVVGSCIDVSNFMAI 303 5103445 2 in 1 1471 2 0 -2.00 58,1461 MLAAVSSYTAVAESVNIIPE IVAILAASAGYVVLRRLFLA 304 5103469 2 in 1 155 4 3 -4.38 41,86 MLESWSIISCRSFGLCVLNT LLFSTMETSTTPLSMRPCIF 305 5103519 2 in 1 369 9 4 -19.30 51,79 MFSRRFRRLSPRDIIGGDVT VSPKGTLGEIVDKDRVYVLE 306 5103569 2 in 1 281 6 3 -6.67 104,146 MNPIPADVAAVVLAGGVGRR AAALNVSTSLIQQESMAGGL 307 5103587 2 in 1 128 9 9 -11.47 44,92 MSVRLELIIGPASLGCIGHY VRMHPWKPEESVEGIKHQTC 308 5103945 2 in 1 478 5 1 -5.39 294,358 MLAVGDSLLCSVDVGTSGIR ALASEDFSRRLEEIRRSSFR 309 5103978 2 in 1 366 3 2 -3.52 210,349 MLDMVNMRRSLAERFKEAPG GLASIPLDVLEERLDKGRTG 310 5103981 2 in 1 365 2 4 -2.49 77,246 MFNLYPPHRSLEGAAILGDN GETALEPPRRFLEMLMRGRV 311 5104066 2 in 1 137 4 4 -4.73 77,127 MRVGLWGGLTSGCHKWGGVA LWFVATFEVLRLWLRVRRGR 312 5104070 2 in 1 636 9 1 -12.79 44,624 MLPVVSQAEVLGWTMLNGRK LLFTLGVYITARSFARSSRI 313 5104187 2 in 1 361 9 2 -10.67 25,350 MAGGAAGLLPIILLLMTAMA IASLLILILYIARRGGRGSS 314 5104207 2 in 1 215 3 2 -3.16 114,176 MDAEAGGLRGACGSLQRVKV RILASERFFMERLEVVHAWR 315 5104269 2 in 1 544 9 1 -11.44 36,174 MARLLARRRRGLSEVYGALV QTYAAVKTGSPPMETDIIIS 316 5104404 2 in 1 138 4 2 -4.05 104,126 MLLHLQYPELLCQRVEREHA LVVQLHYLLYNVGLQGVVVV 317 5104459 2 in 1 233 5 1 -5.42 36,203 MKPLGSGELNSILEAIGPFK WKNPGKVADVLEYVVNDALS 318 5104565 2 in 1 271 0 2 -0.77 32,233 MLHHRRGQANPITVVILVAV LAPFEGDHYLATAFRLPPEV 319 5104660 2 in 1 110 4 5 -4.28 29,70 MYSRSSILNTLLVLSALFTL WGLAGALGSPRGPPWRLPAS 320 5104860 2 in 1 383 4 1 -4.89 95,122 MKRTNNYSILILTHYYSYGP WRCSQILSDIWQRTFEILEL 321 5104864 2 in 1 290 0 4 -0.67 121,246 MIVSVVIPVAKEGNTLYERI RPKNHLLNVLRKLYIAVALR 322 5104974 2 in 1 321 9 5 -19.00 32,312 MATVAGRGLAVLALLALAAL VGVIIYTVAVAAYIYLVRPR 323 5104980 2 in 1 430 7 0 -7.11 29,349 MLKVAQNRTLIYAAAAIVAL MGKFEAPSQVDCARYTIEEG 324 5105153 2 in 1 146 1 3 -1.94 44,105 MLSVAMDRTFISLVPRFTTM SGLEEWPSWPVHSISIVRLP 325 5105407 2 in 1 194 9 6 -18.00 28,189 MATEMRVMVTAFATVSIIML AAIALLIVVLIAAAAYMFAR 326 5105658 2 in 1 107 9 9 -10.64 55,97 MLPCIAGTAITGLPYPIIDT VITVITLAPLLSSQRARSSE 327 5105980 2 in 1 691 9 2 -11.00 71,684 MLETLQQRKLNIFIIIQDLR AILLVAILSLLLGAAISRML 328 5106058 2 in 1 124 9 0 -12.50 25,51 MLVALLDEAAVILIVVGGAA GDVVVVRGSRGLLLLVEPGD 329 5106263 2 in 1 104 7 4 -7.50 40,79 MGHYEEYRARRYHPRYPYHG ALPYQLVHIRRVLIPYCWPR 330 5106290 2 in 1 132 7 6 -7.22 81,112 MGSVRERPRASRTMASIINP ASSAPLKNFNGLKPKSLSIS 331 5106308 2 in 1 184 0 5 -0.38 37,138 MVERRTMLKGVKGKLALAVI SGKGEVNLPITIEYIVEERQ 332 5104455 2 out 73 234 4 6 4.13 35,91 MDVIPTEAIWWRLFLLFTAV AYNSGPDVFSEYVNNVISKY 333 5104857 2 out 6 128 8 3 8.28 52,75 MAFKYSSAPRRLKALRAGCN ESSGSLRLSDSAWATDGINK 334 5104861 2 out 5 191 3 4 3.85 77,187 MELLLDSDQILEHTAIERGV ASIMLWTIKAIAYTLGRIKT 335 5105759 2 out 5 114 9 4 14.08 41,110 MMAILSAIARASLWSWVTYM TFSFIAGSPKFLSLSGKAMF 336 5103534 2 out 3 109 4 7 4.17 57,88 MGTWAVICIMAAWRLSSTSI VALLLSPSTRELTTFSNSIL 337 5104778 2 out 3 103 9 4 21.74 47,69 MWEAVGWFIIMVVNTGWRIR LSPSPTLSATSLCSLARRGL 338 5105912 2 out 3 295 9 2 15.89 26,142 MVLVVFDATSLVWLLFWLLI VEYLPQPIPYLPGQKGAGDK 339 5104238 2 out 2 137 0 4 0.77 56,96 MATSSAGEKTAVRARLRMRA STTRSSSSEASLARSLPRAF 340 5104262 2 out 2 1331 3 0 3.14 28,327 MHTPRISGLAVRLAAALLIL GPYKFAIFRVPGFFTATAPL 341 5104495 2 out 2 318 7 1 7.72 49,299 MGALMLLGMALGGLAGLGAG VYMLKGGGPPAPVESIAIGG 342 5104603 2 out 2 274 9 0 10.29 30,125 MSSIVTLQTGLIYLVASSFA ELRLKIKEQVRLESDSTGIR 343 5105707 2 out 2 120 6 9 6.24 33,78 MLTCLSPLLALEDSLLSLVL STTFSPVSLMTVNLEEGCRS 344 5106084 2 out 2 101 9 6 15.74 73,95 MAGSGLPNRGHSEPLHTKRG TIALMILIAPVAAVTLTLIP 345 5103394 2 out 1 191 9 6 36.44 43,70 MLPLAVEQLTIAGSELLKHE GLKGANDFYQKLIIYKSSNC 346 5103395 2 out 1 514 0 2 0.86 31,485 MRFMVFDKRSVIVILVTMIA VDTTLYIYNGPEAQLLSVAL 347 5103478 2 out 1 163 9 8 9.24 83,136 MVVTANSAMPEISPHLSGSR SLSVTSPGATVTHLSIPPLH 348 5103948 2 out 1 361 1 2 1.33 211,356 MVVGAGVVGLFTAIQLAWRG TAAPSLAAVAASMIDSILRS 349 5103949 2 out 1 121 5 9 5.95 54,87 MGPALLGPRSRLPSDCGIAP EDRNSSPSLFTLLSKLEARL 350 5104032 2 out 1 172 9 3 19.23 31,75 MGGSILSSSIPISSSVYLAI SRSGWRTPLLSTTTMFLGLT 351 5104131 2 out 1 425 4 0 4.50 159,233 MIRSIFRKLLGGRGEGLTQD VLGEDAGRIFTHENKVSKQQ 352 5104296 2 out 1 257 9 0 9.50 89,147 MSSGVGIVTRIQSVSPAISA ADLISKILIAAVETIKAVAG 353 5104418 2 out 1 287 4 3 4.00 144,182 MAVVGAGRMGSGAARRLASR EDYVGVYRLLKKAGAGGGEE 354 5104469 2 out 1 103 9 0 18.40 54,79 MASLISSSPARWATASTASL TRNHPLTGVQTIVINGEYLS 355 5104616 2 out 1 117 1 9 1.61 74,109 MAVKSSYMQLLQYVTAALLV LALLVFGALATYTVVGVEPP 356 5104865 2 out 1 195 1 4 1.18 33,176 MDLCHTTYNFHNIQLIIQKI YVLYLGRRILETVDYFKPWA 357 5104903 2 out 1 275 3 0 3.72 57,182 MISRRRPGISPNSLIGSLKG VLHVGKSRGIGFGAVKTGSI 358 5104917 2 out 1 91 9 9 19.44 34,77 MQASTFLFPLGICCLIDSMF AFIFDGLFYIGTFSICLDCW 359 5105075 2 out 1 180 9 8 12.24 38,88 MLWFVLPVEVLPELLIPVVW FFGEDLTVVDVDEFRYHPAW 360 5105107 2 out 1 103 8 9 8.50 44,77 MPISAAAFLGITPTPSSLLL SPIAHMYMVLCPRNTPKMAK 361 5105211 2 out 1 141 0 9 0.40 73,128 MASLLLIALSLLLDAVDGAV AVLVWITVIQRMVYIAGELR 362 5105259 2 out 1 127 1 5 1.29 41,76 MGVGVAGSSSSVWLWGTTRT ILSANFPITTSSRGGFPVTL 363 5105498 2 out 1 163 8 6 8.62 93,154 MNRDGHFGMAMAIVFGAYSV MIYYFITHFYGISIKPAGAV 364 5105509 2 out 1 363 4 0 4.62 250,356 MYNAALPCRTADWALEELLG ATIALLAHYAILWMDSYADC 365 5105706 2 out 1 137 0 0 0.09 47,117 MLASLSINAILSPISGGCRA GPTGLSSPVSRLKRLVLPAE 366 5105826 2 out 1 120 5 8 5.63 49,110 MKSLLISSTLGLEPNLRCRP LLRSGSILAICCSLMRAVPR 367 5105988 2 out 1 191 5 0 5.11 70,115 MLAYALLTPALLAINSRALG WSTLSTSSRISKAMVFCPSS 368 5106011 2 out 1 365 1 0 1.50 113,136 MEALLRGAAGLDVECTHPIV HLIPATALLEALEGGLDWLA 369 5106199 2 out 1 168 4 2 4.54 38,60 MPFQPRAAPTLFTILTASST LPLSGSTQKLQPPDTQRAHP 370 5106306 2 out 1 109 2 9 2.46 52,95 MRASIALTNFATTGTGYQAS GTRTTLSRPPSWKALSAKGA