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Transmembrane helices for aerpe (Aeropyrum pernix K1)
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 286 | 5105401 | 2 | in | 27 | |ali|phd|phdHtm| | 394 | 3 | 0 | -3.95 | 228,354 | MSQQPECRVEGNYIIVPKGL |
| 287 | 5105561 | 2 | in | 25 | |ali|phd|phdHtm| | 421 | 6 | 2 | -6.15 | 311,402 | MGSSSGQKPRRLEDLVDKLA |
| 288 | 5103437 | 2 | in | 9 | |ali|phd|phdHtm| | 102 | 5 | 9 | -5.75 | 42,89 | MLYGSSFMTFMLFIQTSPST |
| 289 | 5105478 | 2 | in | 8 | |ali|phd|phdHtm| | 161 | 8 | 7 | -8.56 | 87,123 | MPSLSRVCLSQSPGTYSPWS |
| 290 | 5104987 | 2 | in | 7 | |ali|phd|phdHtm| | 529 | 7 | 0 | -7.94 | 120,272 | MKYLTHAVATRVWCEASPAK |
| 291 | 5105753 | 2 | in | 5 | |ali|phd|phdHtm| | 302 | 2 | 0 | -2.02 | 151,191 | MSFMPKALRVAVVQPAPVNN |
| 292 | 5104516 | 2 | in | 4 | |ali|phd|phdHtm| | 134 | 3 | 8 | -3.90 | 49,115 | MRSIARPTISAAIARVRPVP |
| 293 | 5104614 | 2 | in | 4 | |ali|phd|phdHtm| | 407 | 9 | 2 | -15.85 | 31,397 | MLGVKRAILAGVAAGLVIVA |
| 294 | 5105112 | 2 | in | 4 | |ali|phd|phdHtm| | 146 | 6 | 1 | -6.26 | 32,63 | MAIANFGWGICSHVSLTAQA |
| 295 | 5105486 | 2 | in | 4 | |ali|phd|phdHtm| | 160 | 8 | 0 | -8.54 | 36,158 | MPSASRLAKTLQLVSTLLIV |
| 296 | 5103659 | 2 | in | 3 | |ali|phd|phdHtm| | 121 | 6 | 9 | -6.29 | 65,105 | MGADTRLPLTELKREVNKLL |
| 297 | 5106279 | 2 | in | 3 | |ali|phd|phdHtm| | 238 | 9 | 2 | -10.00 | 216,238 | MLPTATPRSLAARASRSLTP |
| 298 | 5104587 | 2 | in | 2 | |ali|phd|phdHtm| | 113 | 3 | 4 | -3.66 | 69,104 | MSALFIMTAPFNPRSLARAP |
| 299 | 5104717 | 2 | in | 2 | |ali|phd|phdHtm| | 228 | 0 | 0 | -0.89 | 119,155 | MGSLEVLAEVVERLCNRPGE |
| 300 | 5104798 | 2 | in | 2 | |ali|phd|phdHtm| | 173 | 2 | 2 | -2.31 | 57,100 | MEEPPALVALVAPGLFVAAV |
| 301 | 5105775 | 2 | in | 2 | |ali|phd|phdHtm| | 126 | 1 | 1 | -1.34 | 27,115 | MKVEPLQCVLSLILALALLR |
| 302 | 5103393 | 2 | in | 1 | |ali|phd|phdHtm| | 157 | 2 | 1 | -2.99 | 52,110 | MTLPRSLTFLSSMVKRYPLQ |
| 303 | 5103445 | 2 | in | 1 | |ali|phd|phdHtm| | 1471 | 2 | 0 | -2.00 | 58,1461 | MLAAVSSYTAVAESVNIIPE |
| 304 | 5103469 | 2 | in | 1 | |ali|phd|phdHtm| | 155 | 4 | 3 | -4.38 | 41,86 | MLESWSIISCRSFGLCVLNT |
| 305 | 5103519 | 2 | in | 1 | |ali|phd|phdHtm| | 369 | 9 | 4 | -19.30 | 51,79 | MFSRRFRRLSPRDIIGGDVT |
| 306 | 5103569 | 2 | in | 1 | |ali|phd|phdHtm| | 281 | 6 | 3 | -6.67 | 104,146 | MNPIPADVAAVVLAGGVGRR |
| 307 | 5103587 | 2 | in | 1 | |ali|phd|phdHtm| | 128 | 9 | 9 | -11.47 | 44,92 | MSVRLELIIGPASLGCIGHY |
| 308 | 5103945 | 2 | in | 1 | |ali|phd|phdHtm| | 478 | 5 | 1 | -5.39 | 294,358 | MLAVGDSLLCSVDVGTSGIR |
| 309 | 5103978 | 2 | in | 1 | |ali|phd|phdHtm| | 366 | 3 | 2 | -3.52 | 210,349 | MLDMVNMRRSLAERFKEAPG |
| 310 | 5103981 | 2 | in | 1 | |ali|phd|phdHtm| | 365 | 2 | 4 | -2.49 | 77,246 | MFNLYPPHRSLEGAAILGDN |
| 311 | 5104066 | 2 | in | 1 | |ali|phd|phdHtm| | 137 | 4 | 4 | -4.73 | 77,127 | MRVGLWGGLTSGCHKWGGVA |
| 312 | 5104070 | 2 | in | 1 | |ali|phd|phdHtm| | 636 | 9 | 1 | -12.79 | 44,624 | MLPVVSQAEVLGWTMLNGRK |
| 313 | 5104187 | 2 | in | 1 | |ali|phd|phdHtm| | 361 | 9 | 2 | -10.67 | 25,350 | MAGGAAGLLPIILLLMTAMA |
| 314 | 5104207 | 2 | in | 1 | |ali|phd|phdHtm| | 215 | 3 | 2 | -3.16 | 114,176 | MDAEAGGLRGACGSLQRVKV |
| 315 | 5104269 | 2 | in | 1 | |ali|phd|phdHtm| | 544 | 9 | 1 | -11.44 | 36,174 | MARLLARRRRGLSEVYGALV |
| 316 | 5104404 | 2 | in | 1 | |ali|phd|phdHtm| | 138 | 4 | 2 | -4.05 | 104,126 | MLLHLQYPELLCQRVEREHA |
| 317 | 5104459 | 2 | in | 1 | |ali|phd|phdHtm| | 233 | 5 | 1 | -5.42 | 36,203 | MKPLGSGELNSILEAIGPFK |
| 318 | 5104565 | 2 | in | 1 | |ali|phd|phdHtm| | 271 | 0 | 2 | -0.77 | 32,233 | MLHHRRGQANPITVVILVAV |
| 319 | 5104660 | 2 | in | 1 | |ali|phd|phdHtm| | 110 | 4 | 5 | -4.28 | 29,70 | MYSRSSILNTLLVLSALFTL |
| 320 | 5104860 | 2 | in | 1 | |ali|phd|phdHtm| | 383 | 4 | 1 | -4.89 | 95,122 | MKRTNNYSILILTHYYSYGP |
| 321 | 5104864 | 2 | in | 1 | |ali|phd|phdHtm| | 290 | 0 | 4 | -0.67 | 121,246 | MIVSVVIPVAKEGNTLYERI |
| 322 | 5104974 | 2 | in | 1 | |ali|phd|phdHtm| | 321 | 9 | 5 | -19.00 | 32,312 | MATVAGRGLAVLALLALAAL |
| 323 | 5104980 | 2 | in | 1 | |ali|phd|phdHtm| | 430 | 7 | 0 | -7.11 | 29,349 | MLKVAQNRTLIYAAAAIVAL |
| 324 | 5105153 | 2 | in | 1 | |ali|phd|phdHtm| | 146 | 1 | 3 | -1.94 | 44,105 | MLSVAMDRTFISLVPRFTTM |
| 325 | 5105407 | 2 | in | 1 | |ali|phd|phdHtm| | 194 | 9 | 6 | -18.00 | 28,189 | MATEMRVMVTAFATVSIIML |
| 326 | 5105658 | 2 | in | 1 | |ali|phd|phdHtm| | 107 | 9 | 9 | -10.64 | 55,97 | MLPCIAGTAITGLPYPIIDT |
| 327 | 5105980 | 2 | in | 1 | |ali|phd|phdHtm| | 691 | 9 | 2 | -11.00 | 71,684 | MLETLQQRKLNIFIIIQDLR |
| 328 | 5106058 | 2 | in | 1 | |ali|phd|phdHtm| | 124 | 9 | 0 | -12.50 | 25,51 | MLVALLDEAAVILIVVGGAA |
| 329 | 5106263 | 2 | in | 1 | |ali|phd|phdHtm| | 104 | 7 | 4 | -7.50 | 40,79 | MGHYEEYRARRYHPRYPYHG |
| 330 | 5106290 | 2 | in | 1 | |ali|phd|phdHtm| | 132 | 7 | 6 | -7.22 | 81,112 | MGSVRERPRASRTMASIINP |
| 331 | 5106308 | 2 | in | 1 | |ali|phd|phdHtm| | 184 | 0 | 5 | -0.38 | 37,138 | MVERRTMLKGVKGKLALAVI |
| 332 | 5104455 | 2 | out | 73 | |ali|phd|phdHtm| | 234 | 4 | 6 | 4.13 | 35,91 | MDVIPTEAIWWRLFLLFTAV |
| 333 | 5104857 | 2 | out | 6 | |ali|phd|phdHtm| | 128 | 8 | 3 | 8.28 | 52,75 | MAFKYSSAPRRLKALRAGCN |
| 334 | 5104861 | 2 | out | 5 | |ali|phd|phdHtm| | 191 | 3 | 4 | 3.85 | 77,187 | MELLLDSDQILEHTAIERGV |
| 335 | 5105759 | 2 | out | 5 | |ali|phd|phdHtm| | 114 | 9 | 4 | 14.08 | 41,110 | MMAILSAIARASLWSWVTYM |
| 336 | 5103534 | 2 | out | 3 | |ali|phd|phdHtm| | 109 | 4 | 7 | 4.17 | 57,88 | MGTWAVICIMAAWRLSSTSI |
| 337 | 5104778 | 2 | out | 3 | |ali|phd|phdHtm| | 103 | 9 | 4 | 21.74 | 47,69 | MWEAVGWFIIMVVNTGWRIR |
| 338 | 5105912 | 2 | out | 3 | |ali|phd|phdHtm| | 295 | 9 | 2 | 15.89 | 26,142 | MVLVVFDATSLVWLLFWLLI |
| 339 | 5104238 | 2 | out | 2 | |ali|phd|phdHtm| | 137 | 0 | 4 | 0.77 | 56,96 | MATSSAGEKTAVRARLRMRA |
| 340 | 5104262 | 2 | out | 2 | |ali|phd|phdHtm| | 1331 | 3 | 0 | 3.14 | 28,327 | MHTPRISGLAVRLAAALLIL |
| 341 | 5104495 | 2 | out | 2 | |ali|phd|phdHtm| | 318 | 7 | 1 | 7.72 | 49,299 | MGALMLLGMALGGLAGLGAG |
| 342 | 5104603 | 2 | out | 2 | |ali|phd|phdHtm| | 274 | 9 | 0 | 10.29 | 30,125 | MSSIVTLQTGLIYLVASSFA |
| 343 | 5105707 | 2 | out | 2 | |ali|phd|phdHtm| | 120 | 6 | 9 | 6.24 | 33,78 | MLTCLSPLLALEDSLLSLVL |
| 344 | 5106084 | 2 | out | 2 | |ali|phd|phdHtm| | 101 | 9 | 6 | 15.74 | 73,95 | MAGSGLPNRGHSEPLHTKRG |
| 345 | 5103394 | 2 | out | 1 | |ali|phd|phdHtm| | 191 | 9 | 6 | 36.44 | 43,70 | MLPLAVEQLTIAGSELLKHE |
| 346 | 5103395 | 2 | out | 1 | |ali|phd|phdHtm| | 514 | 0 | 2 | 0.86 | 31,485 | MRFMVFDKRSVIVILVTMIA |
| 347 | 5103478 | 2 | out | 1 | |ali|phd|phdHtm| | 163 | 9 | 8 | 9.24 | 83,136 | MVVTANSAMPEISPHLSGSR |
| 348 | 5103948 | 2 | out | 1 | |ali|phd|phdHtm| | 361 | 1 | 2 | 1.33 | 211,356 | MVVGAGVVGLFTAIQLAWRG |
| 349 | 5103949 | 2 | out | 1 | |ali|phd|phdHtm| | 121 | 5 | 9 | 5.95 | 54,87 | MGPALLGPRSRLPSDCGIAP |
| 350 | 5104032 | 2 | out | 1 | |ali|phd|phdHtm| | 172 | 9 | 3 | 19.23 | 31,75 | MGGSILSSSIPISSSVYLAI |
| 351 | 5104131 | 2 | out | 1 | |ali|phd|phdHtm| | 425 | 4 | 0 | 4.50 | 159,233 | MIRSIFRKLLGGRGEGLTQD |
| 352 | 5104296 | 2 | out | 1 | |ali|phd|phdHtm| | 257 | 9 | 0 | 9.50 | 89,147 | MSSGVGIVTRIQSVSPAISA |
| 353 | 5104418 | 2 | out | 1 | |ali|phd|phdHtm| | 287 | 4 | 3 | 4.00 | 144,182 | MAVVGAGRMGSGAARRLASR |
| 354 | 5104469 | 2 | out | 1 | |ali|phd|phdHtm| | 103 | 9 | 0 | 18.40 | 54,79 | MASLISSSPARWATASTASL |
| 355 | 5104616 | 2 | out | 1 | |ali|phd|phdHtm| | 117 | 1 | 9 | 1.61 | 74,109 | MAVKSSYMQLLQYVTAALLV |
| 356 | 5104865 | 2 | out | 1 | |ali|phd|phdHtm| | 195 | 1 | 4 | 1.18 | 33,176 | MDLCHTTYNFHNIQLIIQKI |
| 357 | 5104903 | 2 | out | 1 | |ali|phd|phdHtm| | 275 | 3 | 0 | 3.72 | 57,182 | MISRRRPGISPNSLIGSLKG |
| 358 | 5104917 | 2 | out | 1 | |ali|phd|phdHtm| | 91 | 9 | 9 | 19.44 | 34,77 | MQASTFLFPLGICCLIDSMF |
| 359 | 5105075 | 2 | out | 1 | |ali|phd|phdHtm| | 180 | 9 | 8 | 12.24 | 38,88 | MLWFVLPVEVLPELLIPVVW |
| 360 | 5105107 | 2 | out | 1 | |ali|phd|phdHtm| | 103 | 8 | 9 | 8.50 | 44,77 | MPISAAAFLGITPTPSSLLL |
| 361 | 5105211 | 2 | out | 1 | |ali|phd|phdHtm| | 141 | 0 | 9 | 0.40 | 73,128 | MASLLLIALSLLLDAVDGAV |
| 362 | 5105259 | 2 | out | 1 | |ali|phd|phdHtm| | 127 | 1 | 5 | 1.29 | 41,76 | MGVGVAGSSSSVWLWGTTRT |
| 363 | 5105498 | 2 | out | 1 | |ali|phd|phdHtm| | 163 | 8 | 6 | 8.62 | 93,154 | MNRDGHFGMAMAIVFGAYSV |
| 364 | 5105509 | 2 | out | 1 | |ali|phd|phdHtm| | 363 | 4 | 0 | 4.62 | 250,356 | MYNAALPCRTADWALEELLG |
| 365 | 5105706 | 2 | out | 1 | |ali|phd|phdHtm| | 137 | 0 | 0 | 0.09 | 47,117 | MLASLSINAILSPISGGCRA |
| 366 | 5105826 | 2 | out | 1 | |ali|phd|phdHtm| | 120 | 5 | 8 | 5.63 | 49,110 | MKSLLISSTLGLEPNLRCRP |
| 367 | 5105988 | 2 | out | 1 | |ali|phd|phdHtm| | 191 | 5 | 0 | 5.11 | 70,115 | MLAYALLTPALLAINSRALG |
| 368 | 5106011 | 2 | out | 1 | |ali|phd|phdHtm| | 365 | 1 | 0 | 1.50 | 113,136 | MEALLRGAAGLDVECTHPIV |
| 369 | 5106199 | 2 | out | 1 | |ali|phd|phdHtm| | 168 | 4 | 2 | 4.54 | 38,60 | MPFQPRAAPTLFTILTASST |
| 370 | 5106306 | 2 | out | 1 | |ali|phd|phdHtm| | 109 | 2 | 9 | 2.46 | 52,95 | MRASIALTNFATTGTGYQAS |
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