--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Aeropyrum pernix K1 --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 48 5104330 1 in 49 313 1 2 -1.48 129 MVGQPLITILGAGKVGMATA FDEAVQAVKKLVETLPPQLR 49 5104244 1 in 22 279 5 2 -5.96 134 MVLCGLLKRVIRVLAGNYSL KSFKDTKRPPDYKSLWRTGK 50 5105281 1 in 16 267 5 4 -5.39 64 MEEKVAWEPLDVRAIERLDL DCRACLSRLKGGEDLASLYG 51 5104217 1 in 15 380 0 2 -0.28 355 MASRDSLGEVFRVSIFGESH ALLPEWVEDLRPWTRGEAGG 52 5105362 1 in 15 325 5 2 -5.28 83 MPVMNMVQALNTALREEMRR EKLYLPNLAKIYRAVTEVMQ 53 5104232 1 in 12 358 1 2 -1.12 120 MAQAAVERRVFRLSVDEETV RLSRVPVETVSRLMVELWGG 54 5104160 1 in 8 353 2 2 -2.20 106 MDGSMGEGGGQILRTAVALA LEGGLERPFKAELRGAGVSP 55 5104463 1 in 8 364 6 2 -6.44 328 MSAVMARRIAVVGGGVAGLM MAASRPTSSSESVVKEPVEE 56 5104292 1 in 7 250 2 4 -2.03 49 MSCAELYFLGTGAAVNPRRM LRASRGTRVMVPQDLQAVKI 57 5104358 1 in 3 142 9 6 -16.00 30 MGGRSRRGLSPLVASIILIA ATLVYTTDAGETLSSPPVSL 58 5104611 1 in 3 103 2 7 -2.43 89 MLKAVWPMTTVFNPRSTSRA SLSSPIIMPYHFSVSPSHTP 59 5105452 1 in 3 187 5 4 -5.20 59 MTTAHPPAARVVAVTTHHRS PPVVLALLLVNPYSPLGDIP 60 5105846 1 in 3 479 0 1 -0.32 147 MLGGRRQIRPPHLQSFDWCS AWNLENLRRPFEIFRSLTVE 61 5106052 1 in 3 231 3 4 -3.86 182 MGGISKSFSMLEVILFNRRP SFLYRGTLVKSVDGIEFIQA 62 5103644 1 in 2 392 9 2 -13.88 309 MGLIPPKWLERMVEAYRDPS DTFYNYYPPRAEPPRLPWMQ 63 5103652 1 in 2 313 1 2 -1.50 268 MWLVGGSLDDVIKEVSRALG PREVHVVLLDNGRMKAASHP 64 5104141 1 in 2 280 9 3 -10.83 251 MEVAAVDSLEALYKMVAKLY FLEIDCPWEMPMLVFPVGAR 65 5104478 1 in 2 341 2 2 -2.68 201 MFSKKYFSTLFSTLPSDSTR VRSVGPKLLQVVVDAVVRRD 66 5104693 1 in 2 294 0 2 -0.16 67 MVTPLRGGSVDKNAASWLAS NATANALCTSYRDYLLPGLE 67 5104707 1 in 2 152 9 7 -15.36 82 MLRTALLALKTSSRNAISAS PPSGITLEFHTHIKPNRPGP 68 5104999 1 in 2 165 3 4 -4.00 104 MVLGGVASLALGLPGAVMLA GFVGLVDYGVAVERINSLIK 69 5105530 1 in 2 115 5 7 -5.51 99 MLEAVIIPTSFPSWSTTGKC TSLTGVWGAAVRGLTAASID 70 5105571 1 in 2 110 0 7 -0.87 50 MKARSDATALRTTEAIQSLG FQSCPSRPATTLTPFTIRLS 71 5103933 1 in 1 157 9 5 -11.90 39 MFNRFKCGVAGVASVSTRYA VYCPIDGHRDFGMEALITVS 72 5104036 1 in 1 118 2 8 -2.00 100 MFANFSLRLLLFILPTLVFG KLLIHSPPLFIMSLSLSTIC 73 5104046 1 in 1 140 8 6 -8.00 134 MLASLAATGMLLVLAMRTVL CILISTSLPSLSTTAIVSST 74 5104277 1 in 1 233 2 4 -2.25 68 MTVRKSTASACLLALVWPPG SLGLQPLGPLLSKIYSDLHV 75 5104368 1 in 1 282 8 3 -8.00 143 MGGGHHVLPPGWVPLDRPPQ EQTVILNPLHAPTHIPPANP 76 5104491 1 in 1 54 6 9 -6.25 50 MVLENVLGGFEQSFSNTLII VCCMAHIVCRVGWCLCMWIG 77 5104501 1 in 1 221 5 3 -5.25 189 MPSKAETAALLRGLGYSYLE ALDVDREDVAKVLPLVMGTV 78 5104535 1 in 1 83 9 9 -11.85 62 MQEDRVGGRLESPGGEGSRT CSIGRMWNTDKRLCLVDCFN 79 5104721 1 in 1 224 8 3 -8.00 215 MVGYGGDADDEVGLEAKNSL QALAYLLVPRVKTLYLAPQA 80 5104863 1 in 1 363 8 3 -8.00 288 MRILWINHRDPKHPQAGGAE SFSWDNTAITFLNILEDITR 81 5104885 1 in 1 533 6 1 -6.00 155 MGRYFGFRELYPKYPVQLAT DYAAKVAFYTLLLALGEGIL 82 5104943 1 in 1 437 7 2 -7.76 35 MARQGVLVLLPRFDYVVVGA EMPVKWMGLEGRRYEQERLV 83 5105005 1 in 1 124 6 8 -6.44 79 MSSASLSVTPGIMGLRNRVA LMNGSVTLPKASRVPLGPGA 84 5105149 1 in 1 167 6 6 -6.00 80 MGSTIIAAVSSGTSFSTSPG YFLPESSHTYCMLPLTILRP 85 5105179 1 in 1 320 7 2 -7.96 266 MPASKLAYGVYSLTGMYGSV IEEVGESPEAPLKSLRLAGV 86 5105372 1 in 1 134 9 7 -12.00 132 MAADTFELSRLSASILARSS PAPGMVTTIIVWAAFMMSTS 87 5105489 1 in 1 277 9 2 -12.00 149 MCSVCGVRPAVFYRRFSGHR ACGAPVPCGSKYCEDCHTIW 88 5105538 1 in 1 115 8 7 -8.70 41 MTTSFTKFTAASLNTSLFIR TGKPSTLSRHGLSWAARSIR 89 5105578 1 in 1 313 9 3 -20.00 309 MSRGPGGCSTTSYQSWRESR DPITAGFYSILIAAEISEVL 90 5105687 1 in 1 235 3 3 -4.00 145 MYEQGLHSPHLQSSLHILLT ALELPCRHILPAEENQAVGR 91 5105711 1 in 1 135 8 6 -8.00 130 MGVLYRQHHSLVYLPNLLLE IVLEFLLQAYLLLGQAAHLI 92 5105725 1 in 1 153 9 6 -16.00 131 MLALLQFYLEDSQALVLRFS DTIFHTTPCHPGGGVVANSI 93 5105777 1 in 1 437 9 1 -14.00 194 MEDASLKSFLEKVGYRVVDR YERGRIPGFKWGSRRCHQPG 94 5105923 1 in 1 205 4 4 -4.00 126 MLAAGMSRRMGFNKLLAPLC EDLERASKMCSQLGGGPREK 95 5106040 1 in 1 316 1 2 -1.33 63 MVEPSKVVGLISDFGDSPYT RGVRNADLLGVSSRSLGETI 96 5106268 1 in 1 118 2 6 -2.00 105 MVAPVYGALGARNLRDVNLP VAAAHVAELAHSCVVLGPLW 97 5106319 1 in 1 258 6 3 -6.00 91 MEVQRNNPQRGGDERPKPRR NELVRPLLVEEISRLREAEE 98 5105939 1 out 83 359 4 2 4.04 209 MRIEQDFSQSLGVERLKAAR INDVLERLEKGEVLGRAVLI 99 5105142 1 out 55 461 0 1 0.72 188 MLRSEYDIIVIGGGAAGFSA GIKYAALAFYRDVSKMPCCL 100 5104898 1 out 28 393 3 2 3.56 105 MVGRVRKGLGSGVYGSILDL DRWMGENGFSTRDEEVLGEL 101 5104921 1 out 28 332 2 3 2.84 183 MAGEDALRAAVLYGPGDVRV EAPEAFEASLDRESMKIVVT 102 5106051 1 out 25 178 9 4 12.00 81 MLAKVLKKRGAVLRGDFVLS VRLVSVATLKTILEKLGWGG 103 5105554 1 out 23 222 4 4 4.85 191 MLITLLKGFKGCQVGGVAVV DAVKKVARKLKEADAIIGIA 104 5103536 1 out 21 266 4 3 4.08 172 MLGVGKIGGAIVKSLLSCGA RRAAAIGEAIDNEVRRSLNL 105 5105172 1 out 20 345 1 2 1.60 123 MVFSGLVDSLGFHLWCPRCG VLTGSGLKYASLLEKLAAEA 106 5104742 1 out 19 297 6 3 6.68 101 MGWCVMAVLVDSETRVLVQG GVEVAETPFEVPELVRKALR 107 5104236 1 out 18 322 0 2 0.08 85 MASAPALQMASYRKALGRLL RHLRLDPESVAARVRRLAAA 108 5104714 1 out 9 249 0 3 0.44 138 MEATGASEAARVVYEVFARH GYFEARSEEMWRLLRKQGFS 109 5106143 1 out 7 324 1 3 1.44 123 MRRAARASAPGKVIIVGEHF ESSSQAFTASIAEEGARLEE 110 5104136 1 out 5 473 0 1 0.72 233 MARIAEELEKIFGPEKVVSD GIKRVFDPKGILNPGKVVAA 111 5104525 1 out 5 338 9 2 29.89 329 MCASGARALLLTVLALPLLA AAAALAVAVAAALVAFKRRR 112 5104618 1 out 5 101 3 9 3.43 46 MGVIPSRLATSSSHASHPLL LATSQTTPSTRLTERAPWSL 113 5106152 1 out 5 287 1 3 1.28 122 MGVFQRCKPLLGVVHLPPLP KEKARLIASLAERLRRITEG 114 5104543 1 out 4 105 5 8 5.79 52 MPSGRMSSLTSSSLALASAF RKSTAGHQLSLNLLKTSVKS 115 5104774 1 out 4 291 9 3 12.80 218 MTEALELGDCLLSGAVGLVV ARFRWWEDYYERLYTRLLAY 116 5104353 1 out 3 125 3 9 3.81 95 MASRVSRGTRTWLACQEALA AFATAAPRLSRALLSRMDCS 117 5104941 1 out 3 340 9 2 16.00 109 MALNFPVDEGVGEVLSGLRV CPSQRVGLDEAIAMARRLLG 118 5105145 1 out 3 289 8 2 8.00 222 MGGAEESSPETLAYGGRRAL IGDPPIQSLINGEKGTLVTR 119 5105303 1 out 3 454 6 1 6.40 39 MSLLTLAFNPQPRAKTYCSG RLGTIIGGYRIIPKTLSLLA 120 5103448 1 out 2 234 9 4 18.61 218 MLTHYKTEVLRVVVVEALRR VGSEWKRFVRSRVIPILEIA 121 5103612 1 out 2 107 1 9 1.83 79 MPASLTITANTVVPRASQRA VRSCGWGVSDVCAGRVKVWL 122 5104273 1 out 2 396 9 2 28.00 391 MGGGFTLDLVQAVDLPGGYI VLAALALALGLAAAYTASRR 123 5104432 1 out 2 145 9 5 20.56 56 MSLWLDSGYISSLEGILAFS TLPAAGDRRDPHSTVSRVFP 124 5104563 1 out 2 109 4 9 4.56 39 MAASLASAGPGMPWISPRAH SSPSVPARGPCGSRGCTPSA 125 5105461 1 out 2 281 9 3 13.28 169 MKIRNPAHAGTFYPATREEL ANSGDVTGEKAWVVGYPAVR 126 5105465 1 out 2 538 2 1 2.64 30 MVYSGCSFLFSLFFGFPLWY LGEPLNPEYYNQYITEKFYR 127 5105585 1 out 2 292 1 3 1.71 32 MEMAVFEPKLLAAALVALVV IQSGELQKIIDQEMEKWLQQ 128 5103417 1 out 1 138 8 6 8.73 83 MPTTAGMPYSLAVKAAWDSG SAPMFSGGGHLWIDFISSSL 129 5103603 1 out 1 403 6 2 6.00 269 MLEDLEHGVASNGLRYGFYR LSSEWSLEEFLRLPRGLALI 130 5103913 1 out 1 112 8 9 8.72 77 MRAGFIRVEEVVDRRLVSLF FWISRRTLEEFLRKLGESRN 131 5103975 1 out 1 780 4 1 4.00 278 MPYIHASSDEAAFYAAGWVH YHILTVGGEPPGGAKIVFRG 132 5103996 1 out 1 138 7 6 7.35 61 MTNVLFLPQPFCTLFTTPTR ILNFSPVSTTSITSMKPTGN 133 5104250 1 out 1 386 2 2 2.00 315 MGAVKRRIVILGGSFGGLQA EGGLVGEYKKALERYWRSFK 134 5104327 1 out 1 228 4 3 4.00 145 MVPRMGESLLSDRLKRDNMD KATRYEYMFWDMAWRMEKWP 135 5104371 1 out 1 291 1 2 2.00 68 MSLLAQRVRWERVERVAEAF LDRGKAVLLASELVRRPCPG 136 5104446 1 out 1 127 3 6 3.90 59 MGARQVDASYPLEPSFTTAS IASRKAWSPRLPIQAGSAAT 137 5104466 1 out 1 346 4 2 4.00 276 MPGDFLEFGGRVVKGTYSLK RPPSGCYALKLLPRRWKDFV 138 5104528 1 out 1 131 7 5 7.93 76 MKPSIDRESPRNLSPPLLSF CGRARDRLEGRGRVCRGLMG 139 5104592 1 out 1 113 0 8 0.88 50 MPVTSVITEDISISTAPIMK REGFSMEALIFTPSLVLKSS 140 5104750 1 out 1 252 7 3 8.00 152 MGCWTITPARGPAACPPVEA GVGGDWRKAHPAAEAILEIG 141 5104752 1 out 1 134 2 7 2.12 74 MSTRTAQKPLDSACFTASYA SSAFLRASLTTFSTGSPRLT 142 5104804 1 out 1 135 6 5 6.29 100 MNLAASTWATAWFTGTRGFP IPRTRTSPSLLGGIRRPQTL 143 5104842 1 out 1 100 4 8 4.00 29 MLLTLDMCTLGIMSTLSMVI TVALSGRSMLVLLDRPRVPW 144 5104958 1 out 1 643 9 1 12.00 360 MPRGGAGRVKSKIVKDVVHQ KTLQTASSRARELALDLFRY 145 5105041 1 out 1 252 0 6 0.00 130 MLGGSRGLGFHAARALASLG PDYMHGATVVFDGASGRVSW 146 5105156 1 out 1 309 8 3 8.00 171 MARSWLDYKTQAWVQWCPGC ELEGKPFLHPFDIFKDRLVT 147 5105177 1 out 1 240 0 4 0.00 109 MSREPACSYLVLTPSEDLAI SARREELARAALALCRLLKS 148 5105196 1 out 1 244 9 3 12.90 67 MLRWLLQLHAAALTISPSSS KADTASPRLVEGSKVMAGAD 149 5105203 1 out 1 106 9 8 12.00 22 MSLTTLLLVFSFIIFFSGRV MALTSATLLASLSAYLSTAR 150 5105271 1 out 1 101 7 8 7.24 39 MPLAQDEVERNLGGGLCSLG SVHSKVSDLVPDYLAVYVCE 151 5105276 1 out 1 108 9 9 17.65 41 MVYIYAIPIAHSSSRPEACP TLRRVGWSLQATTLMILREV 152 5105394 1 out 1 391 5 1 5.48 333 MASSIIAREELRKLVKELPF TRFSGVLEKMEIPFNWLINL 153 5105496 1 out 1 116 9 6 9.83 41 MVCQGGAACEELGPGSRHHQ AAKPPPQLHYLALNLVEELA 154 5105568 1 out 1 245 8 3 8.00 79 MPSGIFEARLGEAYIVARAA GLAAAGTALAYLEKPMPISS 155 5105590 1 out 1 245 4 4 4.00 159 MASNGAGMPEGKVEIVPTGN ITFDVDPSFGIKLVPIALAS 156 5105909 1 out 1 160 0 6 0.00 147 MGQLYLGRILYGHNLHVGPQ AFVLLVPNVHGPADAVTANV 157 5105956 1 out 1 108 9 7 13.38 95 MCTALPVYNTPLGAALIDCL AAHIGVSVVRYVKEVSLLGE 158 5105984 1 out 1 251 9 4 12.00 31 MSDFLQTTHLIIILCFLQQF EGRYALVRILGSVVKAELYT 159 5106035 1 out 1 371 3 2 4.00 263 MSLNQPPHTRLRHDNPRSPN RRRSRKTILVRLEGLTGERG 160 5106078 1 out 1 202 8 5 8.50 154 MVGSPPLNLGDLPEHVQLVL EHDPQVRVYLPGYGSVEHVR 161 5106088 1 out 1 394 3 2 4.00 113 MVSRPNIHVKSKVAVVGAGI RGVAQAWGDLMQAGTVVVMG 162 5106131 1 out 1 112 8 8 8.00 107 MRATLVADSEASMTREEVRL IISTTPGGSPITWAILVAAR 163 5106286 1 out 1 263 4 4 4.57 53 MRRIGLEALERVLYPVIPVV YLVEDALRRAKSYRRRGQSS