Summary of genome analysis for Drosophila melanogaster

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ID	seqLen	membrane helix			signal peptide	coils			SEG		blast				EUCLID
ID	seqLen	nHtm	topo	htmReg	signal peptide	nCoils	aaInCoils	coilsReg	aaInSeg	segReg	nAlign	nAlignPdb	aaInPdb	pdbReg	EUCLID
ct27950	1217	0			0	0	0		79	1-39, 78-88, 297-325	58	0	0		Translation
ct26798	417	2	in	351-368, 374-391	0	0	0		0		339	13	128	237-364	Transport and binding proteins
ct36399	656	3	in	384-401, 458-475, 639-656	0	0	0		0		391	13	275	253-374, 467-619	Transport and binding proteins
ct27968	2444	0			0	0	0		476	224-252, 269-278, 366-402, 412-428, 494-515, 527-544, 561-576, 588-602, 656-673, 776-792, 796-824, 956-976, 1020-1035, 1095-1113, 1164-1176, 1188-1198, 1225-1253, 1259-1270, 1369-1405, 1525-1536, 1591-1599, 1819-1844, 1924-1937, 2103-2112, 2149-2167	17	0	0		Unknown
ct27972	787	0			0	0	0		35	720-740, 748-761	240	11	552	1-182, 184-293, 308-318, 322-337, 339-365, 373-389, 411-419, 422-431, 433-438, 447-498, 507-552, 559-576, 581-602, 628-653	Purines, pyrimidines, nucleosides, and nucleotides
ct27974	789	0			0	0	0		134	425-442, 473-487, 533-551, 555-575, 659-693, 741-766	138	0	0		Unknown
ct27995	293	0			0	0	0		0		32	0	0		Unknown
ct27990	511	0			0	0	0		26	11-21, 347-361	2141	12	360	123-482	Unknown
ct27993	341	0			0	0	0		57	45-58, 280-294, 296-314, 333-341	203	1	71	14-36, 39-78, 80-87	Transcription
ct27999	357	2	in	41-61, 316-337	0	0	0		12	6-17	27	0	0		Unknown
ct27997	218	0			0	0	0		29	140-168	12	0	0		Replication
ct28005	314	0			0	0	0		65	13-65, 144-155	101	0	0		Unknown
ct28015	555	0			0	4	147	263-297, 315-349, 366-407, 517-551	26	249-262, 326-337	26	0	0		Unknown
ct28019	538	0			0	0	0		66	26-53, 105-130, 132-143	1319	13	381	146-526	Cell envelope
ct28017	508	0			26	0	0		17	5-21	45	0	0		Unknown
ct28013	132	0			0	1	28	90-117	0		48	0	0		Regulatory functions
ct28075	134	0			0	1	28	38-65	0		4	0	0		Unknown
ct28055	245	0			0	0	0		0		467	8	226	19-244	Unknown
ct28077	224	0			0	0	0		15	79-93	270	1	110	46-63, 68-119, 152-191	Unknown
ct28081	389	0			0	0	0		16	104-119	233	8	388	1-388	Energy metabolism
ct28085	319	0			0	0	0		0		3000	69	303	3-305	Purines, pyrimidines, nucleosides, and nucleotides
ct28097	506	3	out	50-67, 122-139, 347-364	17	0	0		0		2180	80	470	35-390, 393-506	Cellular processes
ct28101	593	0			0	0	0		150	25-51, 63-79, 99-134, 228-236, 315-338, 503-521, 557-574	1	0	0		Cell envelope
ct28103	815	0			0	0	0		12	18-29	193	7	551	6-283, 302-574	Cell envelope
ct28105	298	0			0	0	0		68	4-12, 43-57, 67-80, 247-262, 268-281	3	0	0		Unknown
ct28009	322	0			0	0	0		0		219	34	313	7-319	Unknown
ct28099	511	0			0	0	0		116	32-97, 134-183	252	34	332	178-509	Unknown
ct28107	456	6	in	41-58, 82-99, 154-171, 221-241, 293-311, 322-339	0	0	0		13	412-424	57	0	0		Transport and binding proteins
ct28113	655	0			0	0	0		51	75-95, 507-519, 584-600	80	0	0		Unknown
ct28115	387	0			29	0	0		22	167-177, 180-190	17	0	0		Unknown
ct28117	697	0			0	1	28	79-106	360	22-36, 50-127, 132-160, 166-185, 191-202, 204-231, 245-256, 286-312, 343-365, 368-398, 492-508, 520-533, 536-546, 596-638	25	0	0		Unknown
ct28093	513	0			0	0	0		54	35-44, 130-145, 234-241, 367-386	2	0	0		Unknown
ct28109	186	0			20	0	0		11	4-14	555	67	132	44-175	Unknown
ct5922	521	0			0	0	0		26	48-73	114	6	425	95-103, 105-463, 465-521	Biosynthesis of cofactors, prosthetic groups, and carriers
ct28127	295	0			20	0	0		19	204-222	874	85	253	42-294	Transport and binding proteins
ct28139	1060	10	in	50-67, 72-89, 280-297, 328-345, 839-856, 868-885, 921-938, 959-976, 986-1003, 1022-1039	0	0	0		42	72-83, 212-224, 281-297	820	2	879	23-42, 47-89, 93-149, 152-167, 189-200, 222-243, 245-297, 307-362, 373-466, 487-609, 625-689, 714-740, 746-768, 770-818, 820-863, 867-892, 895-907, 912-1018, 1021-1049	Central intermediary metabolism
ct28145	363	0			0	0	0		153	205-328, 333-361	1733	44	207	1-207	Unknown
ct37548	365	0			0	0	0		165	3-14, 206-329, 334-362	1718	43	203	8-210	Unknown
ct28147	578	0			0	0	0		13	454-466	18	0	0		Regulatory functions
ct28111	792	0			0	0	0		46	25-38, 642-658, 759-773	73	2	310	152-195, 198-366, 368-409, 500-532, 550-571	Purines, pyrimidines, nucleosides, and nucleotides
ct28151	535	0			0	0	0		35	323-337, 361-380	6	0	0		Unknown
ct28149	506	0			0	0	0		9	310-318	42	0	0		Unknown
ct28155	598	0			0	0	0		17	112-128	31	0	0		Unknown
ct28157	370	0			22	0	0		21	81-101	18	0	0		Unknown
ct28159	808	6	in	432-449, 615-632, 665-685, 693-711, 733-754, 783-800	0	0	0		12	381-392	3000	7	263	67-329	Transport and binding proteins
ct28165	322	0			0	0	0		15	64-78	2	0	0		Regulatory functions
ct28169	322	0			0	0	0		15	64-78	2	0	0		Regulatory functions
ct28161	543	1	out	233-250	0	0	0		0		1346	4	536	5-199, 201-541	Unknown
ct28167	256	0			0	0	0		19	213-231	1822	101	190	1-190	Cell envelope
ct28171	3583	4	out	1849-1866, 1945-1962, 2285-2303, 3489-3506	0	1	28	1108-1135	420	239-252, 272-279, 325-342, 377-391, 414-422, 498-511, 543-555, 662-684, 686-700, 840-857, 975-993, 999-1007, 1054-1067, 1106-1130, 1186-1191, 1364-1382, 1441-1467, 1622-1635, 2181-2206, 2212-2227, 2295-2312, 2537-2550, 2680-2691, 2847-2857, 3023-3035, 3195-3206, 3512-3529	10	0	0		Unknown
ct28173	328	0			0	0	0		0		22	0	0		Cell envelope
ct28179	330	0			22	0	0		44	62-93, 210-221	29	0	0		Cell envelope
ct28177	416	0			0	0	0		71	5-38, 106-113, 289-298, 329-347	1594	43	333	76-408	Replication
ct28175	596	0			0	0	0		33	375-383, 386-409	1032	5	357	1-357	Unknown
ct28183	434	0			0	0	0		0		166	7	124	305-428	Unknown
ct28187	329	7	out	39-61, 76-99, 115-134, 156-173, 208-229, 259-277, 296-314	0	0	0		49	52-68, 156-173, 249-262	3000	7	326	3-328	Transport and binding proteins
ct28195	510	0			0	0	0		152	8-60, 96-134, 153-171, 335-356, 394-412	290	4	121	189-309	Unknown
ct28191	227	0			20	0	0		12	4-15	8	0	0		Unknown
ct42198	519	4	out	188-205, 273-290, 453-470, 489-506	0	0	0		43	299-320, 487-507	77	0	0		Unknown
ct28201	381	10	in	8-25, 47-64, 97-121, 126-145, 150-167, 183-200, 223-240, 265-289, 307-331, 336-353	25	0	0		28	74-86, 349-363	7	0	0		Unknown
ct28203	315	0			0	0	0		58	242-299	5	0	0		Unknown
ct28205	2119	0			0	0	0		254	32-43, 124-143, 323-342, 540-568, 585-597, 629-641, 652-673, 707-716, 827-837, 1201-1212, 1846-1863, 1920-1931, 1938-1958, 1996-2013, 2056-2068, 2094-2103	1438	24	975	1013-1987	Unknown
ct28207	455	0			25	0	0		15	335-349	2	0	0		Unknown
ct28209	421	0			0	0	0		148	220-233, 288-421	87	0	0		Unknown
ct28211	74	0			0	0	0		0		797	0	0		Regulatory functions
ct28213	269	0			0	0	0		146	17-27, 33-42, 63-103, 126-152, 186-218, 228-238, 246-258	2	0	0		Unknown
ct9654	763	0			0	0	0		6	126-131	89	0	0		Unknown
ct28215	1131	9	in	418-435, 457-474, 490-514, 573-590, 646-663, 685-702, 720-740, 745-762, 810-827	0	0	0		207	180-195, 231-268, 280-314, 322-336, 807-826, 830-846, 904-926, 1013-1043, 1089-1100	1799	0	0		Unknown
ct28217	1970	0			0	0	0		272	173-181, 241-257, 295-313, 325-339, 459-473, 535-548, 665-679, 698-727, 894-920, 1012-1033, 1089-1102, 1183-1195, 1264-1273, 1293-1318, 1560-1571, 1616-1629	95	2	223	1732-1737, 1740-1749, 1755-1758, 1760-1774, 1776-1856, 1859-1965	Energy metabolism
ct37221	744	0			0	0	0		242	4-16, 34-73, 96-102, 146-215, 417-429, 442-456, 469-480, 492-504, 558-587, 615-628, 717-731	2562	42	377	89-465	Regulatory functions
ct40018	744	0			0	0	0		242	4-16, 34-73, 96-102, 146-215, 417-429, 442-456, 469-480, 492-504, 558-587, 615-628, 717-731	2562	42	377	89-465	Regulatory functions
ct9648	744	0			0	0	0		242	4-16, 34-73, 96-102, 146-215, 417-429, 442-456, 469-480, 492-504, 558-587, 615-628, 717-731	2562	42	377	89-465	Regulatory functions
ct28219	281	0			0	0	0		20	114-123, 238-247	1755	160	280	1-280	Unknown
ct28129	1200	0			0	0	0		55	480-496, 700-711, 889-902, 1089-1100	3000	36	423	309-333, 336-373, 377-480, 497-752	Regulatory functions
ct28189	290	0			0	0	0		0		170	1	225	27-51, 54-101, 103-180, 182-255	Unknown
ct28229	410	0			24	0	0		0		686	40	372	20-354, 359-368, 377-392, 394-404	Biosynthesis of cofactors, prosthetic groups, and carriers
ct28231	1397	0			0	0	0		100	207-227, 280-292, 565-578, 1053-1074, 1163-1176, 1247-1262	709	10	273	585-857	Unknown
ct28233	110	0			0	0	0		9	11-19	298	71	62	49-110	Unknown
ct8405	270	1	in	213-230	0	0	0		0		124	2	59	10-68	Transport and binding proteins
ct42452	1088	0			0	1	35	395-429	194	29-57, 74-88, 116-138, 184-223, 276-301, 332-346, 435-466, 1067-1080	3000	77	591	498-1088	Purines, pyrimidines, nucleosides, and nucleotides
ct43152	742	0			0	1	35	49-83	46	89-120, 721-734	3000	77	591	152-742	Purines, pyrimidines, nucleosides, and nucleotides
ct43154	934	0			0	0	0		87	119-130, 200-213, 232-242, 268-284, 354-372, 913-926	3000	72	574	353-599, 608-934	Purines, pyrimidines, nucleosides, and nucleotides
ct43158	934	0			0	0	0		87	119-130, 200-213, 232-242, 268-284, 354-372, 913-926	3000	72	574	353-599, 608-934	Purines, pyrimidines, nucleosides, and nucleotides
ct43160	894	0			0	0	0		82	119-130, 200-213, 232-242, 268-284, 354-367, 873-886	3000	73	546	346-559, 563-894	Purines, pyrimidines, nucleosides, and nucleotides
ct28241	402	0			0	1	28	340-367	141	28-59, 72-97, 143-151, 160-170, 181-188, 221-245, 260-274, 378-392	32	0	0		Transcription
ct28243	286	3	in	9-26, 184-201, 206-225	24	0	0		46	26-37, 53-64, 115-124, 195-206	1	0	0		Purines, pyrimidines, nucleosides, and nucleotides
ct28181	152	0			0	0	0		57	44-63, 74-102, 104-111	1	0	0		Unknown
ct28091	501	0			0	0	0		112	116-157, 177-185, 206-222, 239-250, 443-468, 474-479	446	12	184	257-440	Regulatory functions
ct28253	309	0			0	0	0		0		6	0	0		Regulatory functions
ct38953	309	0			0	0	0		0		6	0	0		Regulatory functions
ct28257	151	0			0	0	0		43	43-65, 110-129	1	0	0		Unknown
ct28255	692	0			0	1	32	477-508	210	76-103, 119-133, 140-160, 201-228, 410-445, 485-549, 641-657	2586	42	524	45-79, 82-570	Regulatory functions
ct28259	272	0			0	0	0		0		1973	568	257	6-262	Cell envelope
ct28263	1081	0			0	1	28	1003-1030	86	102-116, 285-302, 638-654, 704-723, 1025-1040	36	0	0		Unknown
ct38403	1081	0			0	1	28	1003-1030	86	102-116, 285-302, 638-654, 704-723, 1025-1040	36	0	0		Unknown
ct28235	687	0			0	1	28	641-668	98	385-397, 416-440, 463-483, 518-526, 548-559, 563-580	1148	89	370	1-370	Unknown
ct28279	1333	0			0	0	0		171	7-19, 144-156, 490-502, 731-746, 836-851, 881-899, 929-946, 958-969, 973-990, 1076-1101, 1129-1135	3	0	0		Unknown
ct28269	209	0			0	0	0		0		1099	116	209	1-209	Purines, pyrimidines, nucleosides, and nucleotides
ct28239	298	0			0	0	0		55	49-81, 119-129, 189-199	1566	37	91	208-298	Transcription
ct8401	474	0			0	0	0		12	135-146	640	31	321	147-157, 165-474	Unknown
ct28283	251	0			0	0	0		0		19	0	0		Unknown
ct28245	866	9	in	29-46, 375-394, 411-435, 454-471, 494-513, 518-535, 547-564, 587-604, 616-633	0	0	0		48	27-44, 372-387, 496-509	56	4	105	138-154, 156-243	Unknown
ct28281	146	0			0	0	0		27	8-22, 126-137	1	0	0		Unknown
ct28289	281	0			0	0	0		0		11	0	0		Unknown
ct28305	608	0			0	0	0		120	27-62, 126-146, 489-509, 546-587	7	0	0		Unknown
ct28275	917	0			0	0	0		32	80-90, 131-139, 579-590	61	0	0		Unknown
ct28287	789	0			0	0	0		99	98-113, 123-145, 247-265, 384-399, 618-628, 668-681	12	0	0		Unknown
ct28313	232	0			0	0	0		0		124	0	0		Transcription
ct28317	355	0			0	0	0		0		455	37	349	7-355	Cellular processes
ct28319	891	0			0	2	145	419-460, 490-592	125	152-167, 195-207, 405-417, 430-439, 449-456, 522-538, 543-553, 651-659, 669-681, 684-698	19	0	0		Regulatory functions
ct28293	687	7	in	352-372, 388-405, 433-451, 456-480, 485-504, 526-544, 550-567	0	1	28	43-70	29	359-371, 460-475	54	4	105	92-108, 110-197	Unknown
ct28325	212	0			15	0	0		18	130-147	1	0	0		Unknown
ct28331	742	0			0	0	0		14	123-136	2222	13	682	11-24, 27-37, 39-84, 86-681, 684-698	Unknown
ct28333	1045	0			0	0	0		69	301-324, 679-687, 729-744, 752-771	1076	115	225	806-1030	Purines, pyrimidines, nucleosides, and nucleotides
ct28341	176	0			0	0	0		16	34-49	447	2	57	79-110, 112-136	Transcription
ct28343	376	0			0	0	0		0		1510	15	375	2-376	Purines, pyrimidines, nucleosides, and nucleotides
ct28345	316	0			0	0	0		0		30	0	0		Unknown
ct28347	432	9	out	35-52, 57-75, 83-100, 117-134, 139-159, 231-249, 324-341, 370-393, 398-417	0	0	0		17	158-164, 277-286	412	0	0		Transcription
ct28349	76	0			0	0	0		0		20	0	0		Unknown
ct28337	476	0			0	0	0		0		170	3	393	1-59, 61-289, 294-377, 380-400	Energy metabolism
ct28295	765	8	out	278-295, 311-332, 350-367, 393-410, 415-433, 451-468, 488-506, 511-529	0	0	0		14	512-525	60	8	106	40-145	Unknown
ct28353	1498	4	in	525-543, 548-565, 680-698, 719-737	0	0	0		91	545-566, 1061-1072, 1271-1277, 1401-1413, 1419-1434, 1451-1457, 1465-1478	1434	25	519	2-520	Unknown
ct28355	259	0			20	0	0		18	4-21	17	0	0		Unknown
ct28309	1020	0			0	0	0		133	12-25, 161-175, 186-194, 205-213, 261-276, 526-542, 730-742, 787-818, 873-880	7	0	0		Unknown
ct28357	811	0			0	0	0		200	5-18, 25-37, 61-94, 533-577, 606-634, 662-678, 711-751, 756-762	1618	11	425	94-102, 106-136, 143-215, 219-530	Transcription
ct28363	470	0			0	0	0		0		312	20	463	1-186, 191-467	Purines, pyrimidines, nucleosides, and nucleotides
ct42444	470	0			0	0	0		0		312	20	463	1-186, 191-467	Purines, pyrimidines, nucleosides, and nucleotides
ct28361	1426	0			30	0	0		51	14-19, 37-55, 69-81, 1320-1332	3000	52	1029	97-186, 189-436, 445-678, 683-689, 729-862, 896-1211	Regulatory functions
ct28367	1566	0			0	0	0		167	10-35, 39-53, 63-81, 559-574, 961-977, 999-1012, 1448-1468, 1492-1530	16	0	0		Unknown
ct28359	875	9	in	38-55, 366-383, 388-405, 423-442, 460-477, 507-531, 561-578, 594-611, 620-637	0	0	0		36	390-407, 429-446	54	4	105	148-164, 166-253	Unknown
ct28369	893	0			0	0	0		258	27-52, 55-98, 110-125, 389-409, 468-487, 560-569, 583-600, 635-646, 662-673, 687-707, 721-741, 766-784, 791-808	58	0	0		Unknown
ct28375	531	0			0	1	42	178-219	112	121-132, 178-220, 324-364, 430-445	619	58	79	453-531	Unknown
ct28371	1062	0			0	2	56	766-793, 804-831	258	35-46, 122-126, 197-223, 232-269, 287-304, 349-365, 422-443, 476-492, 648-655, 719-735, 819-851, 896-907, 992-1006, 1043-1059	17	0	0		Replication
ct28379	464	1	in	283-301	0	0	0		52	273-285, 357-378, 427-443	135	8	190	96-170, 172-228, 235-258, 260-293	Regulatory functions
ct28377	608	0			0	0	0		143	165-173, 228-242, 267-275, 354-379, 416-452, 463-476, 535-567	260	3	146	25-170	Central intermediary metabolism
ct28285	222	2	out	59-76, 115-132	0	0	0		11	128-138	49	0	0		Cellular processes
ct28271	218	0			0	0	0		9	106-114	1087	116	215	2-216	Purines, pyrimidines, nucleosides, and nucleotides
ct28391	571	0			0	0	0		37	164-175, 254-267, 485-495	109	4	553	4-24, 37-67, 69-405, 407-536, 538-571	Translation
ct28411	528	0			0	0	0		24	18-27, 484-497	2038	40	398	130-527	Cellular processes
ct28413	493	0			21	0	0		0		2181	81	461	32-492	Cellular processes
ct28423	662	0			26	0	0		199	7-23, 74-81, 83-97, 156-186, 358-400, 421-439, 447-512	1100	70	229	172-400	Unknown
ct28425	470	5	in	108-125, 253-270, 275-292, 349-369, 392-409	0	0	0		15	177-191	157	0	0		Unknown
ct28427	418	0			0	0	0		0		93	0	0		Unknown
ct8127	353	0			0	0	0		51	116-126, 193-212, 232-251	14	0	0		Unknown
ct28365	659	0			0	1	42	477-518	109	55-70, 259-270, 291-314, 484-518, 636-657	11	0	0		Unknown
ct25752	290	0			0	0	0		0		1992	568	287	3-289	Transport and binding proteins
ct28433	693	4	in	36-53, 405-422, 466-483, 657-674	0	0	0		34	651-684	352	10	251	265-267, 269-283, 294-387, 495-573, 580-639	Unknown
ct28437	182	0			0	0	0		0		4	0	0		Unknown
ct28439	417	0			0	1	35	8-42	68	10-33, 206-216, 226-240, 246-263	24	0	0		Unknown
ct28441	404	0			18	0	0		14	3-16	576	113	378	27-404	Cellular processes
ct28445	569	0			0	0	0		65	62-71, 358-373, 467-480, 492-516	5	0	0		Cell envelope
ct7946	228	4	in	15-33, 54-73, 84-103, 193-213	30	0	0		50	18-34, 89-107, 198-211	219	2	79	106-151, 155-187	Transport and binding proteins
ct28447	1148	0			0	1	28	376-403	219	13-28, 65-80, 203-246, 312-333, 348-378, 839-861, 1017-1034, 1058-1078, 1098-1109, 1115-1130	46	1	122	610-632, 638-670, 677-697, 711-727, 730-757	Cell envelope
ct28451	400	0			0	1	28	328-355	89	2-22, 127-139, 150-167, 299-310, 331-355	2	0	0		Replication
ct28455	562	0			0	0	0		138	19-40, 174-191, 298-309, 316-343, 376-393, 418-428, 436-450, 457-470	1	0	0		Unknown
ct28459	1455	0			0	1	28	418-445	39	420-435, 694-705, 1170-1180	44	0	0		Transcription
ct28465	144	0			17	0	0		15	21-35	4	0	0		Purines, pyrimidines, nucleosides, and nucleotides
ct8793	510	0			0	0	0		0		5	0	0		Transport and binding proteins
ct8369	75	0			0	0	0		13	42-54	2	0	0		Unknown
ct28453	3080	0			0	2	66	898-925, 2774-2811	1344	86-101, 177-201, 253-272, 286-297, 313-342, 351-362, 378-418, 444-491, 502-523, 533-540, 644-674, 704-728, 851-864, 915-935, 950-992, 998-1042, 1080-1095, 1112-1145, 1194-1208, 1227-1271, 1273-1288, 1306-1325, 1364-1380, 1382-1400, 1419-1430, 1442-1479, 1572-1603, 1606-1627, 1629-1656, 1687-1702, 1802-1814, 2030-2043, 2084-2111, 2113-2148, 2157-2175, 2180-2208, 2230-2236, 2250-2260, 2283-2364, 2373-2399, 2459-2475, 2529-2613, 2631-2645, 2671-2676, 2707-2715, 2734-2836, 2844-2866, 2876-2891, 2952-2963, 2994-3016, 3040-3065	322	4	130	727-742, 746-859	Cell envelope
ct28457	289	0			20	0	0		0		195	7	286	3-288	Transport and binding proteins
ct28467	760	0			20	0	0		49	63-79, 306-322, 645-659	84	0	0		Cell envelope
ct28477	579	0			0	0	0		43	99-123, 143-160	77	13	430	148-577	Regulatory functions
ct28479	621	0			0	3	250	43-127, 135-218, 300-380	40	33-43, 186-198, 586-601	1003	1	274	40-90, 92-251, 253-315	Unknown
ct28469	759	0			0	0	0		76	48-56, 74-80, 148-167, 258-269, 473-484, 496-511	192	4	534	210-218, 220-226, 228-235, 237-263, 265-274, 276-293, 295-365, 367-407, 409-427, 429-514, 517-531, 533-544, 546-594, 596-725, 727-758	Energy metabolism
ct38328	763	0			0	0	0		76	52-60, 78-84, 152-171, 262-273, 477-488, 500-515	192	4	534	214-222, 224-230, 232-239, 241-267, 269-278, 280-297, 299-369, 371-411, 413-431, 433-518, 521-535, 537-548, 550-598, 600-729, 731-762	Energy metabolism
ct28481	741	11	in	18-35, 51-68, 89-106, 378-395, 441-458, 495-512, 523-540, 551-568, 582-599, 610-627, 647-664	37	0	0		49	614-632, 693-722	5	0	0		Unknown
ct28489	1642	0			0	0	0		119	172-188, 269-279, 810-823, 1333-1351, 1360-1372, 1384-1428	681	5	1489	10-136, 138-186, 235-342, 344-502, 507-833, 841-1072, 1086-1138, 1141-1162, 1164-1329, 1350-1383, 1413-1437, 1454-1640	Transcription
ct28407	76	0			0	0	0		0		6	0	0		Unknown
ct28485	229	0			0	0	0		13	140-152	75	7	205	25-229	Transcription
ct28493	367	5	in	27-44, 110-127, 179-199, 263-287, 292-309	0	0	0		21	113-119, 187-200	47	0	0		Energy metabolism
ct28495	201	0			0	0	0		0		1516	134	180	11-190	Unknown
ct28501	143	0			0	0	0		24	120-143	6	0	0		Unknown
ct28507	176	0			0	0	0		49	22-34, 46-81	314	7	46	101-146	Replication
ct28499	2616	1	in	29-46	47	0	0		366	29-45, 235-249, 306-318, 416-439, 454-470, 493-507, 534-547, 778-802, 826-848, 860-869, 1227-1247, 1386-1395, 1512-1529, 1537-1574, 1578-1593, 1604-1628, 1634-1672, 1679-1704	2525	579	1098	860-1398, 1708-1824, 2042-2085, 2089-2099, 2101-2148, 2171-2181, 2202-2529	Cell envelope
ct28511	100	0			0	0	0		43	2-32, 39-50	13	0	0		Unknown
ct28517	315	0			19	0	0		0		206	13	268	3-183, 185-271	Amino acid biosynthesis
ct28491	1380	0			0	0	0		46	6-25, 307-317, 436-450	40	0	0		Unknown
ct28505	316	0			0	0	0		0		40	0	0		Cell envelope
ct28503	255	1	out	230-247	0	0	0		33	156-175, 236-248	37	1	83	39-51, 53-72, 81-92, 96-120, 122-134	Transport and binding proteins
ct28523	159	0			0	0	0		0		841	72	156	1-156	Unknown
ct28521	392	0			0	0	0		42	3-18, 308-333	4	0	0		Unknown
ct10817	346	0			0	0	0		0		402	7	324	12-319, 329-344	Cellular processes
ct28533	224	0			0	0	0		7	78-84	4	0	0		Unknown
ct28527	180	0			22	0	0		0		62	1	105	67-127, 132-138, 143-179	Transport and binding proteins
ct9828	628	0			21	0	0		0		43	0	0		Unknown
ct28535	539	0			23	0	0		14	504-517	90	8	241	250-301, 304-316, 318-335, 339-382, 385-391, 394-467, 469-483, 487-504	Translation
ct28519	1229	0			0	0	0		48	120-134, 915-932, 1010-1024	33	0	0		Unknown
ct28539	601	0			30	1	28	420-447	169	14-26, 71-84, 96-112, 192-204, 206-251, 424-443, 484-501, 506-533	81	0	0		Unknown
ct28545	221	0			20	0	0		0		60	0	0		Cell envelope
ct28547	448	0			0	0	0		19	99-117	2537	38	442	6-447	Regulatory functions
ct28541	329	1	out	14-31	28	0	0		15	11-25	1993	12	279	42-60, 62-304, 306-322	Unknown
ct28555	422	0			0	0	0		14	186-199	71	0	0		Unknown
ct41765	422	0			0	0	0		14	186-199	71	0	0		Unknown
ct28561	543	0			0	0	0		132	32-49, 203-218, 308-322, 324-333, 358-379, 463-474, 484-522	3	0	0		Unknown
ct28559	268	0			0	0	0		64	63-80, 91-100, 135-148, 163-184	27	0	0		Unknown
ct28563	194	0			0	0	0		0		13	0	0		Cell envelope
ct28537	301	0			0	0	0		0		83	1	171	128-227, 230-300	Unknown
ct28569	409	2	out	249-266, 370-387	0	0	0		42	182-203, 253-272	40	4	107	1-23, 29-103, 105-107, 111-116	Unknown
ct28567	207	0			19	0	0		0		27	0	0		Unknown
ct28557	315	0			0	1	28	30-57	45	167-178, 206-222, 287-302	14	0	0		Unknown
ct28573	283	0			0	0	0		27	68-80, 190-203	4	0	0		Unknown
ct43062	282	0			0	0	0		14	189-202	4	0	0		Unknown
ct28577	332	0			0	0	0		11	267-277	558	51	331	2-332	Energy metabolism
ct28571	560	0			0	0	0		35	105-125, 535-548	12	0	0		Unknown
ct28579	122	0			0	0	0		0		171	7	57	5-18, 21-63	Translation
ct28581	378	3	in	158-175, 192-209, 291-308	26	0	0		0		189	7	282	79-126, 128-212, 214-270, 277-368	Cellular processes
ct28591	386	0			0	0	0		13	84-96	1	0	0		Unknown
ct28587	228	6	in	19-37, 48-65, 86-103, 121-138, 161-178, 192-209	39	0	0		26	24-37, 92-103	4	0	0		Energy metabolism
ct41281	228	6	in	19-37, 48-65, 86-103, 121-138, 161-178, 192-209	39	0	0		26	24-37, 92-103	4	0	0		Energy metabolism
ct28595	241	0			0	0	0		0		932	3	117	6-28, 32-125	Unknown
ct28593	540	1	out	488-505	25	0	0		15	8-22	620	1	257	147-159, 165-219, 229-247, 249-277, 279-294, 296-305, 310-357, 360-426	Unknown
ct28603	539	1	out	489-506	21	0	0		0		635	1	251	153-210, 216-228, 231-239, 251-279, 281-296, 298-307, 312-359, 362-429	Central intermediary metabolism
ct28599	330	8	in	10-27, 43-60, 73-97, 128-145, 161-178, 211-228, 249-267, 306-323	28	0	0		55	88-100, 209-227, 252-274	13	0	0		Energy metabolism
ct28609	731	2	out	164-181, 203-220	0	0	0		56	162-177, 388-402, 630-640, 657-670	37	0	0		Unknown
ct28605	130	0			0	0	0		0		62	11	126	2-25, 27-128	Cellular processes
ct28611	576	0			0	0	0		43	157-168, 241-251, 271-290	611	65	534	42-575	Transport and binding proteins
ct28619	239	1	out	99-117	27	0	0		15	97-111	1	0	0		Transport and binding proteins
ct28615	411	0			0	0	0		0		3000	74	293	119-411	Purines, pyrimidines, nucleosides, and nucleotides
ct28621	499	3	out	9-26, 145-162, 458-477	24	0	0		15	453-467	562	1	242	150-183, 192-237, 252-297, 299-307, 312-359, 362-407, 412-424	Central intermediary metabolism
ct28637	1302	9	in	51-68, 119-136, 202-226, 306-323, 342-359, 735-752, 775-792, 860-884, 965-982	0	0	0		16	1117-1132	3000	8	1142	76-330, 337-388, 391-642, 713-758, 762-827, 830-1300	Transport and binding proteins
ct28639	652	9	out	162-179, 232-249, 269-287, 308-325, 378-395, 401-418, 474-491, 518-535, 585-602	18	0	0		20	136-155	175	0	0		Unknown
ct28645	677	6	in	219-236, 283-300, 326-343, 359-376, 456-474, 524-541	18	0	0		0		80	0	0		Unknown
ct28655	383	0			0	0	0		12	247-258	76	1	344	4-75, 77-113, 115-169, 177-276, 280-317, 335-376	Amino acid biosynthesis
ct28659	1732	0			0	0	0		51	397-406, 646-659, 1414-1424, 1711-1726	71	2	171	1230-1291, 1293-1334, 1337-1403	Unknown
ct28647	1653	0			0	0	0		182	15-33, 65-82, 421-439, 627-662, 772-787, 838-859, 872-886, 1110-1130, 1626-1641	449	23	1437	10-571, 579-685, 879-1646	Unknown
ct28665	251	0			0	0	0		0		12	0	0		Unknown
ct28667	1309	0			0	1	67	1017-1083	156	52-88, 152-157, 325-333, 688-694, 1050-1064, 1079-1103, 1118-1132, 1176-1187, 1222-1234, 1247-1263	286	6	335	442-776	Unknown
ct28673	405	0			0	0	0		22	238-247, 341-352	10	0	0		Cell envelope
ct28607	391	0			0	0	0		29	310-338	2288	14	372	3-374	Unknown
ct28675	1905	0			0	0	0		298	60-100, 204-218, 251-264, 336-345, 503-514, 545-572, 639-666, 672-706, 750-757, 869-878, 906-917, 990-1006, 1038-1057, 1095-1106, 1358-1368, 1383-1389, 1391-1408	43	1	195	1097-1120, 1122-1125, 1127-1163, 1165-1169, 1171-1176, 1180-1201, 1236-1254, 1256-1260, 1262-1294, 1300-1304, 1306-1311, 1313-1319, 1331-1338, 1340-1353	Unknown
ct28679	48	0			0	0	0		0		1	0	0		Regulatory functions
ct28677	351	0			0	0	0		12	286-297	16	0	0		Unknown
ct28685	346	0			0	0	0		0		16	0	0		Regulatory functions
ct9013	56	0			0	0	0		0		2	0	0		Unknown
ct28687	575	0			0	0	0		67	479-512, 543-575	21	0	0		Transport and binding proteins
ct28683	1600	0			0	0	0		220	14-35, 60-71, 151-171, 254-269, 332-354, 376-398, 411-439, 489-502, 523-569, 864-876	47	0	0		Unknown
ct42533	192	0			0	0	0		0		36	0	0		Unknown
ct42535	267	0			17	0	0		13	22-34	35	0	0		Energy metabolism
ct9007	1325	0			0	1	28	159-186	126	63-75, 372-391, 435-443, 466-476, 695-723, 822-834, 859-877, 895-906	38	0	0		Unknown
ct28697	202	0			18	0	0		14	56-69	1	0	0		Unknown
ct43064	202	0			18	0	0		14	56-69	1	0	0		Unknown
ct28696	319	0			0	0	0		0		12	0	0		Unknown
ct28705	628	0			0	0	0		0		621	6	520	71-87, 94-105, 107-290, 293-302, 304-309, 311-318, 320-345, 350-376, 381-420, 426-439, 441-463, 468-497, 499-533, 539-606, 608-627	Regulatory functions
ct28629	258	0			0	0	0		135	87-115, 136-187, 205-258	1457	37	86	5-90	Transcription
ct28691	372	0			0	0	0		19	175-182, 345-355	2	0	0		Unknown
ct28709	224	0			23	0	0		10	128-137	1	0	0		Biosynthesis of cofactors, prosthetic groups, and carriers
ct28625	511	0			0	0	0		95	53-63, 67-90, 231-240, 453-495, 502-508	66	0	0		Unknown
ct28711	524	9	in	13-30, 124-144, 185-202, 207-224, 273-290, 314-331, 356-380, 405-422, 443-460	25	0	0		12	371-382	2612	2	349	91-183, 187-224, 226-326, 340-429, 435-452, 457-465	Transport and binding proteins
ct28701	276	0			0	0	0		0		7	0	0		Unknown
ct28719	501	0			0	0	0		126	20-34, 153-157, 191-207, 310-335, 394-400, 408-433, 453-482	2	0	0		Cell envelope
ct28717	474	0			0	0	0		12	456-467	1119	6	172	246-417	Transcription
ct28633	1485	0			0	0	0		29	659-668, 720-738	165	29	1048	155-254, 256-258, 260-297, 299-510, 516-590, 593-654, 804-899, 912-1309, 1311-1374	Cellular processes
ct28721	1179	0			0	5	294	317-365, 475-502, 672-720, 729-770, 810-935	26	186-197, 1088-1101	511	10	837	1-53, 57-142, 144-201, 222-228, 239-287, 292-372, 374-388, 393-423, 427-450, 452-464, 471-497, 714-734, 736-840, 845-854, 858-942, 996-1061, 1065-1170	Replication
ct28723	211	0			0	0	0		0		31	0	0		Central intermediary metabolism
ct28727	259	0			0	0	0		0		17	0	0		Replication
ct28729	563	0			0	0	0		0		3	0	0		Unknown
ct16259	1706	3	out	322-339, 411-428, 855-872	0	6	552	948-1059, 1127-1300, 1309-1343, 1368-1493, 1502-1557, 1579-1627	176	173-186, 1008-1025, 1118-1129, 1224-1238, 1247-1261, 1316-1337, 1407-1441, 1622-1646, 1657-1676	1595	33	1573	2-378, 380-397, 399-454, 461-518, 534-607, 609-709, 728-952, 955-1014, 1016-1311, 1313-1361, 1365-1623	Cellular processes
ct38897	1646	0			0	6	552	888-999, 1067-1240, 1249-1283, 1308-1433, 1442-1497, 1519-1567	176	173-186, 948-965, 1058-1069, 1164-1178, 1187-1201, 1256-1277, 1347-1381, 1562-1586, 1597-1616	1640	34	1514	2-378, 380-397, 399-454, 461-516, 532-607, 609-638, 645-709, 728-1563	Cellular processes
ct28735	182	2	in	87-111, 142-159	15	0	0		0		14	0	0		Unknown
ct28731	774	0			0	1	28	98-125	38	20-45, 55-66	2224	13	373	103-475	Unknown
ct28737	819	0			20	0	0		142	9-24, 30-57, 61-76, 334-347, 722-742, 746-792	223	0	0		Unknown
ct28733	306	0			0	0	0		20	202-221	45	0	0		Transport and binding proteins
ct28703	1423	0			0	1	28	1145-1172	188	299-309, 518-529, 1053-1083, 1211-1254, 1275-1294, 1308-1323, 1350-1372, 1389-1400, 1402-1420	1227	5	1044	6-38, 61-86, 88-93, 95-158, 161-183, 185-218, 222-369, 387-479, 483-623, 651-900, 902-1056, 1093-1163	Replication
ct28743	479	0			0	0	0		109	12-48, 83-105, 156-164, 185-193, 322-339, 379-391	11	0	0		Unknown
ct28739	449	0			0	0	0		119	37-49, 67-75, 87-99, 155-177, 187-218, 237-248, 426-442	37	1	92	237-281, 283-329	Cell envelope
ct28651	1320	8	in	59-76, 126-143, 206-230, 312-329, 746-763, 787-804, 872-896, 977-994	0	0	0		48	8-34, 351-362, 658-666	3000	8	1142	78-326, 337-398, 400-654, 725-781, 785-839, 842-1049, 1062-1317	Transport and binding proteins
ct28745	1945	0			0	1	47	188-234	471	198-225, 238-257, 316-326, 335-389, 429-468, 489-509, 517-534, 569-583, 631-642, 731-742, 928-938, 969-991, 1226-1266, 1287-1301, 1304-1325, 1518-1531, 1573-1579, 1663-1679, 1769-1796, 1800-1819, 1849-1889	54	0	0		Transcription
ct28759	554	0			0	0	0		64	122-137, 176-189, 192-204, 216-236	1217	32	273	259-531	Transcription
ct28749	382	0			0	0	0		14	199-212	39	0	0		Unknown
ct28751	382	0			0	0	0		14	199-212	39	0	0		Unknown
ct28757	1284	0			0	0	0		252	13-25, 56-69, 127-185, 614-630, 946-957, 969-987, 989-1004, 1020-1040, 1050-1072, 1159-1188, 1191-1207, 1253-1263	199	5	694	195-252, 256-261, 263-281, 283-384, 398-405, 407-464, 470-566, 624-876, 878-883, 885-931, 933-945, 950-956, 961-969, 972-982	Central intermediary metabolism
ct28763	302	0			0	0	0		0		1984	568	272	31-302	Cell envelope
ct28765	198	0			0	0	0		33	1-10, 23-45	85	0	0		Regulatory functions
ct28767	349	1	in	16-33	29	0	0		0		14	0	0		Purines, pyrimidines, nucleosides, and nucleotides
ct28769	3712	0			22	0	0		63	2681-2696, 3036-3047, 3265-3299	1504	160	2272	209-863, 1319-1643, 1737-2157, 2676-2715, 2717-2803, 2806-2843, 2879-3224, 3351-3710	Unknown
ct28775	322	1	in	235-252	0	0	0		0		172	1	239	59-82, 85-213, 215-300	Transport and binding proteins
ct43120	301	0			0	0	0		0		172	1	239	38-61, 64-192, 194-279	Transport and binding proteins
ct28747	90	0			0	0	0		0		21	0	0		Unknown
ct28777	249	0			0	0	0		0		3000	34	249	1-249	Regulatory functions
ct28781	499	4	out	4-21, 219-236, 290-307, 439-456	21	0	0		25	2-14, 289-300	2161	81	465	32-496	Energy metabolism
ct28783	501	0			17	0	0		22	2-18, 72-76	2141	47	471	30-500	Energy metabolism
ct28787	485	0			0	0	0		0		2169	78	471	14-484	Energy metabolism
ct28789	503	0			21	0	0		17	4-20	2169	73	472	32-503	Energy metabolism
ct28779	589	2	in	25-42, 317-334	0	0	0		125	19-43, 214-236, 240-252, 332-343, 347-360, 410-433, 523-536	304	23	110	460-569	Unknown
ct28791	426	0			0	0	0		0		2160	75	423	3-425	Energy metabolism
ct28793	462	0			0	0	0		12	257-268	2133	47	462	1-462	Energy metabolism
ct28795	504	0			20	0	0		28	4-19, 299-310	2170	76	471	34-504	Energy metabolism
ct28799	506	4	in	6-23, 220-237, 303-320, 440-457	24	0	0		16	418-433	2165	73	473	34-506	Cellular processes
ct28801	1224	0			0	1	35	335-369	65	263-268, 294-306, 374-379, 407-426, 837-849, 889-895	1389	24	313	906-1218	Unknown
ct38587	1042	0			0	1	35	153-187	65	81-86, 112-124, 192-197, 225-244, 655-667, 707-713	1394	24	313	724-1036	Unknown
ct28771	332	0			0	0	0		51	63-86, 162-176, 310-321	75	2	65	154-218	Transcription
ct28803	558	9	in	50-67, 245-266, 308-325, 332-349, 378-395, 422-439, 444-461, 496-513, 518-535	0	0	0		49	47-58, 129-148, 246-262	155	0	0		Transport and binding proteins
ct28805	229	0			0	0	0		0		8	0	0		Unknown
ct28813	631	0			0	0	0		11	617-627	316	17	483	101-362, 368-477, 490-508, 513-522, 525-606	Unknown
ct28809	1398	0			0	0	0		121	6-31, 54-65, 102-119, 492-498, 709-719, 733-748, 857-872, 888-902	477	19	168	1113-1280	Fatty acid and phospholipid metabolism
ct28815	849	0			0	0	0		66	153-167, 430-438, 518-529, 627-641, 672-686	2273	16	354	3-356	Transport and binding proteins
ct28823	217	0			0	0	0		0		6	0	0		Energy metabolism
ct28483	2113	0			0	0	0		96	31-45, 247-270, 411-425, 462-468, 729-740, 1446-1468	168	8	572	1496-1647, 1649-1736, 1745-1812, 1814-1821, 1838-1845, 1854-1938, 1941-1990, 1999-2111	Unknown
ct28827	690	0			0	0	0		104	175-192, 210-219, 241-250, 624-638, 640-690	3000	69	330	249-578	Purines, pyrimidines, nucleosides, and nucleotides
ct28825	255	0			0	0	0		10	45-54	94	6	254	1-254	Replication
ct28843	452	0			0	0	0		144	8-30, 33-55, 105-117, 228-239, 258-269, 285-299, 315-330, 390-419	6	0	0		Unknown
ct28831	270	0			28	0	0		18	126-143	39	0	0		Unknown
ct28847	340	0			0	0	0		25	150-160, 260-273	2	0	0		Unknown
ct28829	388	0			0	0	0		18	120-137	2512	38	387	2-388	Regulatory functions
ct28849	189	0			0	0	0		12	47-58	7	0	0		Unknown
ct28851	845	0			0	0	0		102	142-159, 219-254, 513-525, 557-575, 626-641	2624	42	619	171-789	Regulatory functions
ct28859	774	0			0	1	28	723-750	105	138-154, 199-211, 214-230, 485-496, 665-682, 702-714, 718-732	2568	43	708	58-108, 117-773	Regulatory functions
ct28863	2237	0			0	2	63	682-716, 1206-1233	579	365-381, 391-405, 429-439, 450-474, 499-517, 520-570, 581-594, 770-781, 862-883, 988-993, 1046-1058, 1096-1133, 1201-1224, 1230-1265, 1289-1300, 1313-1325, 1456-1474, 1530-1545, 1585-1598, 1676-1696, 1730-1761, 1765-1775, 1813-1821, 1873-1893, 1965-1971, 2000-2047, 2073-2087, 2168-2180, 2187-2193, 2220-2237	12	0	0		Unknown
ct28873	863	0			0	2	63	152-179, 726-760	123	155-170, 183-190, 240-253, 612-627, 728-743, 747-760, 780-802, 817-832	2573	40	695	169-863	Regulatory functions
ct28869	2225	2	in	1206-1223, 2045-2063	0	0	0		63	2053-2072, 2098-2107, 2145-2158, 2198-2216	299	10	234	12-45, 55-77, 79-220, 222-256	Regulatory functions
ct28877	536	1	out	174-193	26	0	0		57	200-209, 300-346	589	1	47	233-248, 251-268, 270-282	Cell envelope
ct28871	734	0			0	1	31	35-65	209	2-13, 40-75, 99-127, 161-175, 213-229, 252-284, 342-360, 507-523, 616-627, 673-691	135	9	185	407-591	Replication
ct28879	577	0			0	0	0		114	7-53, 57-83, 529-554, 558-571	1508	11	441	79-127, 130-521	Transcription
ct31895	578	0			0	0	0		114	8-54, 58-84, 530-555, 559-572	1508	11	441	80-128, 131-522	Transcription
ct42851	578	0			0	0	0		114	8-54, 58-84, 530-555, 559-572	1507	11	441	80-128, 131-522	Transcription
ct42853	574	0			0	0	0		114	4-50, 54-80, 526-551, 555-568	1515	11	441	76-124, 127-518	Transcription
ct28887	356	1	in	41-58	0	0	0		52	32-62, 89-109	132	10	206	134-339	Cellular processes
ct28885	577	0			0	0	0		231	2-36, 128-139, 212-221, 245-285, 289-309, 342-415, 419-456	40	5	218	34-83, 85-90, 100-195, 512-577	Energy metabolism
ct28883	730	0			0	2	108	69-132, 492-535	186	5-11, 163-187, 193-207, 257-291, 341-359, 394-413, 506-522, 527-537, 548-554, 666-679, 711-726	4	0	0		Unknown
ct28889	547	0			19	0	0		110	14-30, 94-105, 316-370, 391-402, 466-479	302	6	258	54-59, 61-257, 486-497, 502-506, 509-546	Unknown
ct8086	913	0			0	0	0		96	68-80, 554-564, 657-680, 811-822, 854-889	2674	455	910	3-912	Unknown
ct28897	625	0			0	0	0		45	194-209, 472-487, 590-602	7	0	0		Unknown
ct28895	258	0			17	0	0		14	4-17	102	1	165	35-64, 70-168, 176-198, 203-215	Unknown
ct28903	962	0			0	1	28	470-497	109	438-465, 488-500, 703-725, 765-779, 790-808, 880-890	28	0	0		Unknown
ct28893	493	0			0	0	0		252	2-95, 100-134, 154-173, 185-191, 204-217, 306-311, 329-346, 356-370, 441-483	2298	26	93	361-453	Transcription
ct40560	270	0			0	0	0		82	83-88, 106-123, 133-147, 218-260	2432	26	89	144-232	Transcription
ct28865	405	0			0	0	0		87	8-73, 292-312	103	1	119	135-189, 195-217, 220-260	Unknown
ct28905	704	0			0	0	0		157	20-44, 56-73, 157-179, 216-241, 255-266, 275-286, 307-323, 384-407	3000	72	296	409-704	Regulatory functions
ct40904	704	0			0	0	0		157	20-44, 56-73, 157-179, 216-241, 255-266, 275-286, 307-323, 384-407	3000	72	296	409-704	Regulatory functions
ct28911	278	0			0	0	0		35	98-114, 242-259	1155	73	273	1-273	Regulatory functions
ct28907	101	0			16	0	0		9	8-16	143	0	0		Purines, pyrimidines, nucleosides, and nucleotides
ct28915	187	0			0	0	0		0		98	8	186	1-186	Unknown
ct28913	1567	0			22	0	0		28	820-831, 965-980	526	29	281	518-534, 541-804	Cell envelope
ct28917	311	0			0	0	0		0		158	1	215	25-44, 46-105, 111-124, 130-175, 177-251	Unknown
ct28923	353	0			0	0	0		0		149	1	211	71-88, 90-146, 151-167, 173-182, 186-219, 221-295	Unknown
ct28901	1275	0			0	0	0		105	139-149, 416-427, 491-503, 885-932, 1244-1264	636	0	0		Replication
ct28933	389	2	in	218-235, 240-257	21	0	0		106	5-22, 163-201, 311-336, 349-359, 377-388	1	0	0		Unknown
ct28945	114	0			0	0	0		15	3-17	39	0	0		Unknown
ct28939	222	0			0	0	0		12	199-210	13	0	0		Unknown
ct28947	267	0			0	0	0		12	195-206	2024	10	249	1-249	Unknown
ct1683	386	1	out	237-254	0	0	0		0		413	11	248	34-176, 201-227, 234-311	Unknown
ct28957	925	0			0	0	0		181	160-167, 227-266, 334-344, 485-531, 539-552, 621-638, 644-657, 825-841, 865-876	2614	44	367	559-925	Regulatory functions
ct28967	165	4	in	22-39, 58-80, 87-107, 121-138	44	0	0		17	24-40	1	0	0		Unknown
ct28937	868	0			25	0	0		243	130-141, 164-215, 239-264, 384-407, 420-442, 471-493, 524-547, 607-627, 730-744, 817-827, 856-867	15	0	0		Unknown
ct27680	626	0			0	0	0		168	17-31, 74-130, 159-183, 190-208, 219-256, 260-273	91	0	0		Unknown
ct28975	202	0			0	0	0		0		1	0	0		Unknown
ct28979	321	0			0	0	0		57	130-139, 145-159, 226-240, 257-273	30	1	57	1-57	Unknown
ct28984	110	0			0	0	0		24	87-110	6	0	0		Unknown
ct28986	835	0			0	1	45	89-133	216	88-151, 163-183, 188-218, 288-297, 305-314, 334-354, 367-373, 405-427, 496-510, 805-818	2643	41	282	540-808, 810-822	Regulatory functions
ct7685	137	1	out	7-24	26	0	0		21	4-24	1	0	0		Transport and binding proteins
ct7856	447	0			0	0	0		8	3-10	878	18	409	4-412	Transport and binding proteins
ct28990	543	0			0	1	28	369-396	170	81-88, 314-329, 360-371, 400-431, 436-469, 472-497, 499-540	19	0	0		Replication
ct28977	330	0			0	1	67	190-256	106	47-56, 60-74, 94-102, 131-142, 227-258, 284-311	2427	26	108	111-218	Transcription
ct29034	330	0			0	1	67	190-256	106	47-56, 60-74, 94-102, 131-142, 227-258, 284-311	2427	26	108	111-218	Transcription
ct28992	197	4	in	43-62, 67-84, 126-143, 148-166	0	0	0		38	51-76, 152-163	5	0	0		Unknown
ct29000	530	0			0	0	0		119	292-314, 329-357, 408-432, 450-464, 472-498	1664	38	285	6-290	Transcription
ct29002	530	0			0	0	0		119	292-314, 329-357, 408-432, 450-464, 472-498	1664	38	285	6-290	Transcription
ct29004	331	0			0	0	0		0		1645	38	247	20-266	Transcription
ct28998	630	0			0	1	88	479-566	143	53-81, 85-101, 143-180, 186-228, 497-512	1531	44	233	207-439	Unknown
ct29012	725	0			0	0	0		45	632-640, 671-691, 695-709	243	0	0		Cellular processes
ct29016	722	0			0	0	0		0		202	0	0		Unknown
ct29024	202	1	in	131-148	0	0	0		33	134-151, 162-176	1	0	0		Cell envelope
ct29018	802	0			0	1	38	151-188	141	4-19, 26-71, 82-93, 123-143, 163-172, 200-235	1427	11	419	371-458, 467-797	Transcription
ct29014	230	1	in	142-159	24	0	0		49	35-42, 52-75, 171-187	9	0	0		Cell envelope
ct43122	230	1	in	142-159	24	0	0		49	35-42, 52-75, 171-187	9	0	0		Cell envelope
ct29022	327	0			0	0	0		0		115	15	326	1-326	Biosynthesis of cofactors, prosthetic groups, and carriers
ct29026	307	0			0	1	28	274-301	29	155-173, 262-271	9	0	0		Unknown
ct29030	239	6	out	20-42, 47-65, 84-101, 128-148, 153-175, 195-212	32	0	0		44	84-102, 136-147, 196-208	3	0	0		Unknown
ct29028	421	4	in	80-97, 168-185, 217-235, 240-257	0	0	0		0		14	0	0		Energy metabolism
ct29036	603	0			28	0	0		0		618	67	552	30-581	Transport and binding proteins
ct29032	254	0			0	0	0		0		11	0	0		Translation
ct29042	506	0			0	0	0		139	88-104, 139-158, 178-189, 346-365, 368-389, 393-409, 465-495	6	0	0		Unknown
ct29048	102	0			26	0	0		12	9-20	2	0	0		Unknown
ct29052	214	0			0	0	0		10	143-152	16	0	0		Replication
ct29046	271	4	in	11-28, 41-64, 127-151, 175-199	23	0	0		14	191-204	154	0	0		Translation
ct29054	552	4	out	20-37, 147-164, 442-459, 468-485	34	0	0		14	49-62	64	0	0		Unknown
ct29062	644	0			0	1	28	609-636	20	427-440, 500-505	452	4	230	84-243, 246-301, 304-317	Unknown
ct29068	580	0			0	0	0		23	265-277, 437-446	8	0	0		Unknown
ct29074	530	0			0	0	0		139	30-53, 57-71, 153-170, 243-256, 424-464, 468-494	2546	38	351	179-529	Regulatory functions
ct29078	424	0			0	0	0		54	178-197, 253-264, 362-383	1	0	0		Unknown
ct29086	306	0			18	0	0		16	290-305	147	0	0		Unknown
ct29090	1058	9	out	438-457, 512-529, 600-619, 646-663, 694-711, 743-760, 819-837, 874-891, 967-984	0	0	0		87	34-40, 58-87, 103-109, 133-147, 608-620, 823-837	20	0	0		Unknown
ct28994	908	0			0	0	0		117	477-487, 793-868, 878-907	38	0	0		Unknown
ct29092	550	5	in	47-64, 190-207, 270-287, 292-309, 465-486	0	0	0		15	471-485	32	0	0		Fatty acid and phospholipid metabolism
ct29080	366	0			20	0	0		12	16-27	199	7	294	22-315	Cell envelope
ct29060	459	0			23	0	0		33	35-45, 173-194	226	34	295	165-459	Transport and binding proteins
ct29100	599	0			0	0	0		108	183-196, 213-227, 238-261, 375-391, 435-446, 511-536	62	0	0		Unknown
ct29108	404	0			0	0	0		12	220-231	247	7	402	2-403	Amino acid biosynthesis
ct29110	1037	1	out	12-29	23	0	0		92	8-18, 67-79, 131-144, 507-540, 702-721	50	0	0		Unknown
ct29102	1425	0			0	0	0		24	676-685, 1049-1062	176	8	421	911-981, 991-1134, 1150-1223, 1280-1308, 1311-1365, 1367-1409, 1416-1420	Transport and binding proteins
ct29112	374	0			0	0	0		26	223-232, 279-294	3	0	0		Unknown
ct28925	284	0			0	0	0		32	30-49, 225-236	22	0	0		Unknown
ct28927	284	0			0	0	0		32	30-49, 225-236	22	0	0		Unknown
ct28929	284	0			0	0	0		32	30-49, 225-236	22	0	0		Unknown
ct29114	578	0			0	0	0		39	175-189, 214-225, 471-482	0	0	0		Regulatory functions
ct29116	920	8	out	107-124, 139-156, 163-180, 215-232, 241-258, 306-323, 363-380, 867-884	0	0	0		80	42-70, 219-232, 368-379, 762-777, 828-836	164	22	462	450-497, 500-913	Energy metabolism
ct29118	499	3	out	211-231, 256-273, 291-310	0	0	0		0		116	0	0		Transport and binding proteins
ct29122	428	0			0	0	0		0		1128	31	391	31-64, 67-134, 136-424	Transcription
ct29124	194	0			0	0	0		0		169	3	130	43-47, 49-173	Transport and binding proteins
ct29128	464	2	out	104-121, 363-380	0	1	42	315-356	29	316-344	29	0	0		Unknown
ct29136	207	3	out	59-76, 84-101, 140-164	0	0	0		31	117-127, 132-151	12	0	0		Unknown
ct29130	385	0			0	0	0		15	354-368	25	0	0		Unknown
ct29132	411	0			0	0	0		15	380-394	23	0	0		Unknown
ct29134	305	0			0	0	0		15	274-288	4	0	0		Unknown
ct29144	254	0			0	1	28	168-195	41	179-205, 225-238	336	1	65	47-89, 92-113	Cellular processes
ct29142	428	0			0	0	0		18	22-39	339	1	271	147-182, 187-319, 324-385, 387-426	Cellular processes
ct29098	421	0			0	0	0		100	209-220, 259-274, 293-312, 319-333, 344-357, 366-388	1747	42	199	1-199	Transcription
ct29146	421	0			0	0	0		100	209-220, 259-274, 293-312, 319-333, 344-357, 366-388	1747	42	199	1-199	Transcription
ct29150	276	0			0	0	0		0		11	0	0		Unknown
ct19059	496	2	in	382-399, 478-495	19	0	0		0		2318	223	484	2-485	Unknown
ct29152	784	0			0	0	0		11	583-593	9	0	0		Unknown
ct15537	470	0			0	0	0		162	8-20, 151-190, 211-222, 225-289, 296-312, 386-400	101	1	114	10-73, 81-94, 100-135	Unknown
ct29156	1038	0			0	1	56	128-183	183	56-68, 81-92, 107-121, 168-198, 368-391, 491-500, 523-535, 731-758, 771-780, 791-801, 848-863	9	0	0		Unknown
ct29158	732	0			0	0	0		20	658-677	103	3	280	15-64, 66-295	Purines, pyrimidines, nucleosides, and nucleotides
ct29154	346	0			0	1	35	300-334	134	33-39, 107-150, 180-209, 219-235, 250-265, 319-338	2439	26	79	239-317	Transcription
ct29166	389	0			0	1	35	326-360	134	33-39, 107-150, 180-209, 219-235, 293-308, 362-381	2465	26	118	272-389	Transcription
ct29168	570	0			0	0	0		30	256-268, 430-446	22	1	64	19-28, 30-83	Regulatory functions
ct29164	492	0			22	0	0		13	434-446	2157	81	457	30-486	Energy metabolism
ct43369	1059	0			0	0	0		0		1714	22	482	40-521	Unknown
ct43371	1059	0			0	0	0		0		1714	22	482	40-521	Unknown
ct9123	1059	0			0	0	0		0		1714	22	482	40-521	Unknown
ct29172	198	0			0	0	0		31	111-129, 139-150	298	0	0		Regulatory functions
ct29174	108	0			0	0	0		0		3	0	0		Unknown
ct9305	281	0			0	0	0		0		7	0	0		Unknown
ct29176	162	0			0	0	0		0		42	5	133	30-162	Energy metabolism
ct29180	207	0			0	0	0		17	61-77	1	0	0		Unknown
ct29170	246	0			0	0	0		18	30-47	254	0	0		Amino acid biosynthesis
ct29188	218	0			0	0	0		43	12-54	14	0	0		Unknown
ct29190	268	0			27	0	0		0		1987	568	247	22-268	Cell envelope
ct29212	113	0			0	0	0		0		6	0	0		Unknown
ct29228	259	0			24	0	0		12	6-17	39	0	0		Unknown
ct9331	746	0			0	0	0		28	428-440, 474-488	744	34	453	13-448, 457-473	Transport and binding proteins
ct29234	914	7	in	478-495, 538-555, 576-593, 604-621, 644-662, 667-684, 708-725	0	1	42	858-899	36	266-278, 707-720, 832-840	1419	24	436	22-457	Unknown
ct29242	341	0			0	0	0		12	253-264	21	0	0		Unknown
ct29178	941	11	in	70-87, 92-114, 148-165, 198-215, 232-249, 298-315, 331-348, 373-390, 431-449, 454-471, 488-512	0	0	0		33	504-522, 852-865	301	0	0		Unknown
ct29246	774	0			0	0	0		39	92-102, 372-399	29	0	0		Fatty acid and phospholipid metabolism
ct29250	429	0			0	0	0		54	2-16, 288-306, 345-364	18	0	0		Regulatory functions
ct29248	384	0			0	0	0		15	58-72	12	0	0		Unknown
ct9561	662	0			0	0	0		93	122-139, 157-166, 183-194, 205-218, 321-333, 348-373	314	1	434	2-128, 252-316, 329-335, 340-370, 381-452, 454-547, 554-591	Cellular processes
ct29240	95	0			0	0	0		0		42	0	0		Unknown
ct29254	245	0			0	0	0		20	143-162	13	0	0		Unknown
ct29244	429	0			24	1	28	106-133	29	6-19, 352-366	35	0	0		Unknown
ct29262	678	1	out	470-487	0	0	0		75	436-450, 465-480, 508-519, 568-599	497	9	435	18-39, 42-249, 254-458	Unknown
ct29276	442	0			0	0	0		21	411-431	1	0	0		Unknown
ct29278	84	0			0	0	0		0		50	0	0		Unknown
ct29264	300	0			0	0	0		22	146-155, 217-228	67	0	0		Unknown
ct29280	336	1	out	9-26	27	0	0		15	11-25	2753	101	268	26-293	Energy metabolism
ct29270	747	0			0	0	0		41	201-227, 238-251	106	2	306	367-419, 421-544, 554-588, 596-655, 679-691, 693-713	Unknown
ct24190	147	0			0	0	0		0		1	0	0		Transport and binding proteins
ct29286	415	1	in	54-71	0	0	0		18	145-162	7	0	0		Unknown
ct29288	186	0			0	0	0		0		1	0	0		Unknown
ct29294	671	0			0	0	0		15	329-343	2501	39	188	484-671	Regulatory functions
ct29296	392	0			0	0	0		102	160-180, 242-258, 260-271, 277-290, 326-363	2717	50	262	2-144, 158-276	Transcription
ct29298	127	0			24	0	0		14	6-19	1	0	0		Unknown
ct29306	495	0			0	1	29	64-92	56	63-92, 118-133, 222-231	2	0	0		Cellular processes
ct29308	148	0			24	0	0		0		29	0	0		Cell envelope
ct29300	108	0			0	0	0		0		86	4	103	4-99, 101-107	Unknown
ct29314	221	0			0	0	0		12	190-201	43	0	0		Unknown
ct41892	221	0			0	0	0		12	190-201	43	0	0		Unknown
ct29318	338	0			0	0	0		55	32-59, 64-83, 181-187	262	9	89	106-179, 181-195	Unknown
ct29268	2037	1	out	11-28	32	0	0		21	14-22, 625-636	3000	201	1918	1-1318, 1426-1450, 1458-2032	Central intermediary metabolism
ct29322	545	11	out	40-58, 88-105, 113-132, 145-165, 194-211, 239-256, 294-311, 349-366, 371-388, 399-416, 466-486	30	0	0		14	152-165	234	0	0		Cell envelope
ct29324	965	0			0	1	35	86-120	82	273-285, 312-326, 344-352, 368-380, 653-665, 714-732	700	0	0		Transcription
ct29320	507	0			0	0	0		70	142-153, 377-410, 420-433, 488-497	109	0	0		Regulatory functions
ct29328	183	0			0	0	0		15	75-89	76	1	95	33-57, 59-128	Regulatory functions
ct29330	449	6	out	133-150, 223-240, 324-341, 367-384, 401-418, 432-449	38	0	0		163	64-116, 192-221, 247-298, 368-395	77	0	0		Unknown
ct29326	709	0			22	0	0		38	7-29, 283-297	1979	568	680	27-398, 402-709	Cell envelope
ct29252	303	0			0	0	0		34	54-67, 111-122, 253-260	2	0	0		Unknown
ct29360	193	0			0	0	0		0		2056	12	182	4-185	Central intermediary metabolism
ct29364	79	0			0	0	0		0		379	8	78	2-79	Purines, pyrimidines, nucleosides, and nucleotides
ct29366	106	0			22	0	0		0		133	0	0		Purines, pyrimidines, nucleosides, and nucleotides
ct29376	784	0			0	0	0		10	596-605	2544	41	387	398-784	Regulatory functions
ct29386	604	0			0	0	0		12	46-57	173	3	162	311-349, 354-377, 379-389, 394-442, 444-465, 468-484	Unknown
ct29380	301	0			0	0	0		0		188	1	66	21-59, 63-89	Unknown
ct29390	154	0			0	0	0		0		1694	39	128	6-133	Transcription
ct29392	364	0			0	0	0		0		103	0	0		Energy metabolism
ct29400	267	0			16	0	0		0		1988	568	258	9-266	Cell envelope
ct29372	183	2	in	89-106, 138-155	16	0	0		0		13	0	0		Transport and binding proteins
ct29402	290	0			19	0	0		0		1997	568	280	2-7, 16-289	Cell envelope
ct29370	739	0			0	1	28	691-718	201	2-31, 63-77, 114-128, 159-169, 241-261, 364-377, 402-411, 580-603, 610-631, 700-738	20	0	0		Replication
ct29404	341	0			0	0	0		12	93-104	73	17	305	1-21, 24-163, 178-301, 305-318, 320-325	Transport and binding proteins
ct29408	262	0			17	0	0		12	61-72	1982	568	242	21-262	Cell envelope
ct29412	222	0			0	0	0		21	128-139, 159-167	14	0	0		Translation
ct29414	279	0			16	0	0		12	102-113	1991	568	265	15-279	Cell envelope
ct29416	442	0			0	0	0		44	21-35, 81-91, 269-275, 334-344	266	16	431	2-9, 11-433	Cellular processes
ct29418	378	0			0	0	0		77	114-125, 127-158, 174-197, 235-243	100	4	98	244-308, 310-342	Unknown
ct29430	547	0			0	0	0		74	426-439, 465-479, 500-514, 518-547	137	3	401	20-345, 347-421	Replication
ct42306	547	0			0	0	0		74	426-439, 465-479, 500-514, 518-547	137	3	401	20-345, 347-421	Replication
ct29428	599	8	in	236-253, 271-288, 315-332, 341-358, 368-385, 391-409, 466-483, 495-512	0	0	0		27	101-115, 346-357	65	0	0		Unknown
ct29432	671	9	in	232-249, 265-282, 312-329, 334-351, 365-382, 393-410, 427-444, 496-513, 543-560	0	0	0		17	638-654	66	0	0		Transport and binding proteins
ct29406	494	0			0	1	28	466-493	19	465-483	28	0	0		Unknown
ct29436	738	9	out	130-148, 249-266, 277-294, 300-322, 362-385, 468-485, 500-517, 585-602, 615-632	15	0	0		31	469-481, 616-633	2240	2	405	219-238, 249-355, 359-397, 405-425, 428-446, 452-501, 503-643, 645-652	Transport and binding proteins
ct29442	626	0			0	0	0		6	299-304	25	0	0		Fatty acid and phospholipid metabolism
ct29422	554	0			0	0	0		158	122-127, 135-160, 260-273, 315-346, 354-383, 393-417, 479-495, 507-514	2476	37	204	2-109, 211-306	Transcription
ct29444	525	0			0	0	0		0		17	0	0		Replication
ct29452	707	0			0	1	28	347-374	197	2-29, 36-48, 101-115, 127-137, 156-204, 220-242, 339-378, 382-399	846	36	188	501-688	Unknown
ct29456	810	0			0	0	0		254	192-221, 288-303, 310-336, 343-353, 393-402, 428-439, 455-485, 537-546, 577-620, 676-687, 690-719, 729-737, 798-809	7	0	0		Unknown
ct29458	954	0			0	0	0		76	30-42, 167-178, 327-339, 742-765, 927-940	2376	19	626	10-388, 393-461, 470-475, 477-517, 519-525, 532-655	Unknown
ct29462	523	0			0	0	0		79	131-152, 188-198, 266-296, 486-500	4	0	0		Unknown

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