EVA: Detailed information for proteins added on: 2001_12_12

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	DSSP header	DSSP compnd	DSSP source	DSSP author
2001_12_12	1j83	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: ENDO-1,4-BETA GLUCANASE ENGF; CHAIN: A, B; EC: 3.2.1.4; ENGINEERED: YES	CLOSTRIDIUM CELLULOVORANS; ORGANISM_TAXID: 1493;	V.NOTENBOOM,A.B.BORASTON,P.CHIU,A.C.J.FREELOVE,D.G.KILBURN, D.R.ROSE
2001_12_12	1k92	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LIGASE	MOLECULE: ARGININOSUCCINATE SYNTHASE; CHAIN: A; FRAGMENT: RESIDUES 1 TO 446; SYNONYM: CITRULLINE--ASPARTATE LIGASE; ARGININOSUCCINATE SYNTHETASE; EC: 6.3.4.5; ENGINEERED: YES; MUTATION: YES	ESCHERICHIA COLI; ORGANISM_TAXID: 562; GENE: ARGG;	C.T.LEMKE,P.L.HOWELL
2001_12_12	1im5	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: 180AA LONG HYPOTHETICAL PYRAZINAMIDASE/NICOTINAMIDASE; CHAIN: A; EC: 3.5.1.19; ENGINEERED: YES	PYROCOCCUS HORIKOSHII; ORGANISM_TAXID: 53953; GENE: PH 999;	X.DU,S.-H.KIM
2001_12_12	1jmv	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CHAPERONE	MOLECULE: UNIVERSAL STRESS PROTEIN A; CHAIN: A, B, C, D; SYNONYM: USPA; ENGINEERED: YES	HAEMOPHILUS INFLUENZAE; ORGANISM_TAXID: 727; GENE: USPA;	M.C.SOUSA,D.B.MCKAY
2001_12_12	1irq	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	GENE REGULATION	MOLECULE: OMEGA TRANSCRIPTIONAL REPRESSOR; CHAIN: A, B; SYNONYM: HYPOTHETICAL PROTEIN OMEGA; ENGINEERED: YES	STREPTOCOCCUS PYOGENES; ORGANISM_TAXID: 1314;	K.MURAYAMA,P.ORTH,A.B.DE LA HOZ,J.C.ALONSO,W.SAENGER
2001_12_12	1ilw	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: 180 AA LONG HYPOTHETICAL PYRAZINAMIDASE/NICOTINAMIDASE; CHAIN: A; EC: 3.5.1.19; ENGINEERED: YES	PYROCOCCUS HORIKOSHII; ORGANISM_TAXID: 53953;	X.DU,S.-H.KIM,BERKELEY STRUCTURAL GENOMICS CENTER (BSGC)
2001_12_12	1k8k	F	pdb_ascii	dssp	fasta	psi_ascii	psi_html	STRUCTURAL PROTEIN	MOLECULE: ACTIN-LIKE PROTEIN 3; CHAIN: A; SYNONYM: ARP3; ACTIN-RELATED PROTEIN 3; ACTIN-2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ACTIN-LIKE PROTEIN 2; CHAIN: B; SYNONYM: ARP2; ACTIN-RELATED PROTEIN 2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 41 KDA SUBUNIT; CHAIN: C; SYNONYM: P40; P41-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1B; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 34 KDA SUBUNIT; CHAIN: D; SYNONYM: P34; P34-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 21 KDA SUBUNIT; CHAIN: E; SYNONYM: P21; P21-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 3; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 20 KDA SUBUNIT; CHAIN: F; SYNONYM: P20; P20-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 4; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 16 KDA SUBUNIT; CHAIN: G; SYNONYM: P16; P16-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 5; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX	BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS	R.C.ROBINSON,K.TURBEDSKY,D.A.KAISER,H.N.HIGGS,J.-B.MARCHAND, S.CHOE,T.D.POLLARD
2001_12_12	1ci9	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: PROTEIN (CARBOXYLESTERASE); CHAIN: A, B; SYNONYM: ESTB; EC: 3.1.1.1; ENGINEERED: YES	BURKHOLDERIA GLADIOLI; ORGANISM_TAXID: 28095; ATCC: NCPPB1891, ATCC1028; COLLECTION: NCPPB1891, ATCC1028; CELLULAR_LOCATION: INTRACELLULAR; GENE: ESTB;	U.G.WAGNER,E.I.PETERSEN,H.SCHWAB,C.KRATKY
2001_12_12	1jju	C	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ELECTRON TRANSPORT PROTEIN	MOLECULE: QUINOHEMOPROTEIN AMINE DEHYDROGENASE; CHAIN: A; MOLECULE: QUINOHEMOPROTEIN AMINE DEHYDROGENASE; CHAIN: B; MOLECULE: QUINOHEMOPROTEIN AMINE DEHYDROGENASE; CHAIN: C	PARACOCCUS DENITRIFICANS; ORGANISM_TAXID: 266; STRAIN: IFO12442; PARACOCCUS DENITRIFICANS; ORGANISM_TAXID: 266; STRAIN: IFO12442; PARACOCCUS DENITRIFICANS; ORGANISM_TAXID: 266; STRAIN: IFO12442	S.DATTA,Y.MORI,K.TAKAGI,K.KAWAGUCHI,Z.-W.CHEN,K.KANO, T.IKEDA,T.OKAJIMA,S.KURODA,K.TANIZAWA,F.S.MATHEWS
2001_12_12	1ci8	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: PROTEIN (CARBOXYLESTERASE); CHAIN: A, B; SYNONYM: ESTB; EC: 3.1.1.1; ENGINEERED: YES	BURKHOLDERIA GLADIOLI; ORGANISM_TAXID: 28095; ATCC: NCPPB1891, ATCC10248; COLLECTION: NCPPB1891, ATCC10248; CELLULAR_LOCATION: INTRACELLULAR; GENE: ESTB;	U.G.WAGNER,E.I.PETERSEN,H.SCHWAB,C.KRATKY
2001_12_12	1k8k	E	pdb_ascii	dssp	fasta	psi_ascii	psi_html	STRUCTURAL PROTEIN	MOLECULE: ACTIN-LIKE PROTEIN 3; CHAIN: A; SYNONYM: ARP3; ACTIN-RELATED PROTEIN 3; ACTIN-2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ACTIN-LIKE PROTEIN 2; CHAIN: B; SYNONYM: ARP2; ACTIN-RELATED PROTEIN 2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 41 KDA SUBUNIT; CHAIN: C; SYNONYM: P40; P41-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1B; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 34 KDA SUBUNIT; CHAIN: D; SYNONYM: P34; P34-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 21 KDA SUBUNIT; CHAIN: E; SYNONYM: P21; P21-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 3; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 20 KDA SUBUNIT; CHAIN: F; SYNONYM: P20; P20-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 4; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 16 KDA SUBUNIT; CHAIN: G; SYNONYM: P16; P16-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 5; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX	BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS	R.C.ROBINSON,K.TURBEDSKY,D.A.KAISER,H.N.HIGGS,J.-B.MARCHAND, S.CHOE,T.D.POLLARD
2001_12_12	1go3	F	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: DNA-DIRECTED RNA POLYMERASE SUBUNIT E; CHAIN: E, M; EC: 2.7.7.6; ENGINEERED: YES; MOLECULE: DNA-DIRECTED RNA POLYMERASE SUBUNIT F; CHAIN: F, N; EC: 2.7.7.6; ENGINEERED: YES	METHANOCOCCUS JANNASCHII; ORGANISM_TAXID: 2190; OTHER_DETAILS: CO-EXPRESSED USING A BICISTRIONIC METHANOCOCCUS JANNASCHII; ORGANISM_TAXID: 2190; OTHER_DETAILS: CO-EXPRESSED USING A BICISTRIONIC	F.TODONE,P.BRICK,F.WERNER,R.O.J.WEINZIERL,S.ONESTI
2001_12_12	1jmv	B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CHAPERONE	MOLECULE: UNIVERSAL STRESS PROTEIN A; CHAIN: A, B, C, D; SYNONYM: USPA; ENGINEERED: YES	HAEMOPHILUS INFLUENZAE; ORGANISM_TAXID: 727; GENE: USPA;	M.C.SOUSA,D.B.MCKAY
2001_12_12	1hnn	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: PHENYLETHANOLAMINE N-METHYLTRANSFERASE; CHAIN: A, B; SYNONYM: PNMTASE; EC: 2.1.1.28; ENGINEERED: YES	HOMO SAPIENS; HUMAN; ORGANISM_TAXID: 9606; GENE: PNMT;	J.L.MARTIN,J.BEGUN,M.J.MCLEISH,J.M.CAINE,G.L.GRUNEWALD
2001_12_12	1jju	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ELECTRON TRANSPORT PROTEIN	MOLECULE: QUINOHEMOPROTEIN AMINE DEHYDROGENASE; CHAIN: A; MOLECULE: QUINOHEMOPROTEIN AMINE DEHYDROGENASE; CHAIN: B; MOLECULE: QUINOHEMOPROTEIN AMINE DEHYDROGENASE; CHAIN: C	PARACOCCUS DENITRIFICANS; ORGANISM_TAXID: 266; STRAIN: IFO12442; PARACOCCUS DENITRIFICANS; ORGANISM_TAXID: 266; STRAIN: IFO12442; PARACOCCUS DENITRIFICANS; ORGANISM_TAXID: 266; STRAIN: IFO12442	S.DATTA,Y.MORI,K.TAKAGI,K.KAWAGUCHI,Z.-W.CHEN,K.KANO, T.IKEDA,T.OKAJIMA,S.KURODA,K.TANIZAWA,F.S.MATHEWS
2001_12_12	1go3	N	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: DNA-DIRECTED RNA POLYMERASE SUBUNIT E; CHAIN: E, M; EC: 2.7.7.6; ENGINEERED: YES; MOLECULE: DNA-DIRECTED RNA POLYMERASE SUBUNIT F; CHAIN: F, N; EC: 2.7.7.6; ENGINEERED: YES	METHANOCOCCUS JANNASCHII; ORGANISM_TAXID: 2190; OTHER_DETAILS: CO-EXPRESSED USING A BICISTRIONIC METHANOCOCCUS JANNASCHII; ORGANISM_TAXID: 2190; OTHER_DETAILS: CO-EXPRESSED USING A BICISTRIONIC	F.TODONE,P.BRICK,F.WERNER,R.O.J.WEINZIERL,S.ONESTI
2001_12_12	1hnn	B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: PHENYLETHANOLAMINE N-METHYLTRANSFERASE; CHAIN: A, B; SYNONYM: PNMTASE; EC: 2.1.1.28; ENGINEERED: YES	HOMO SAPIENS; HUMAN; ORGANISM_TAXID: 9606; GENE: PNMT;	J.L.MARTIN,J.BEGUN,M.J.MCLEISH,J.M.CAINE,G.L.GRUNEWALD
2001_12_12	1k8k	C	pdb_ascii	dssp	fasta	psi_ascii	psi_html	STRUCTURAL PROTEIN	MOLECULE: ACTIN-LIKE PROTEIN 3; CHAIN: A; SYNONYM: ARP3; ACTIN-RELATED PROTEIN 3; ACTIN-2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ACTIN-LIKE PROTEIN 2; CHAIN: B; SYNONYM: ARP2; ACTIN-RELATED PROTEIN 2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 41 KDA SUBUNIT; CHAIN: C; SYNONYM: P40; P41-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1B; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 34 KDA SUBUNIT; CHAIN: D; SYNONYM: P34; P34-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 21 KDA SUBUNIT; CHAIN: E; SYNONYM: P21; P21-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 3; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 20 KDA SUBUNIT; CHAIN: F; SYNONYM: P20; P20-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 4; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 16 KDA SUBUNIT; CHAIN: G; SYNONYM: P16; P16-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 5; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX	BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS	R.C.ROBINSON,K.TURBEDSKY,D.A.KAISER,H.N.HIGGS,J.-B.MARCHAND, S.CHOE,T.D.POLLARD
2001_12_12	1irq	B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	GENE REGULATION	MOLECULE: OMEGA TRANSCRIPTIONAL REPRESSOR; CHAIN: A, B; SYNONYM: HYPOTHETICAL PROTEIN OMEGA; ENGINEERED: YES	STREPTOCOCCUS PYOGENES; ORGANISM_TAXID: 1314;	K.MURAYAMA,P.ORTH,A.B.DE LA HOZ,J.C.ALONSO,W.SAENGER
2001_12_12	1k8k	G	pdb_ascii	dssp	fasta	psi_ascii	psi_html	STRUCTURAL PROTEIN	MOLECULE: ACTIN-LIKE PROTEIN 3; CHAIN: A; SYNONYM: ARP3; ACTIN-RELATED PROTEIN 3; ACTIN-2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ACTIN-LIKE PROTEIN 2; CHAIN: B; SYNONYM: ARP2; ACTIN-RELATED PROTEIN 2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 41 KDA SUBUNIT; CHAIN: C; SYNONYM: P40; P41-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1B; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 34 KDA SUBUNIT; CHAIN: D; SYNONYM: P34; P34-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 21 KDA SUBUNIT; CHAIN: E; SYNONYM: P21; P21-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 3; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 20 KDA SUBUNIT; CHAIN: F; SYNONYM: P20; P20-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 4; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX; MOLECULE: ARP2/3 COMPLEX 16 KDA SUBUNIT; CHAIN: G; SYNONYM: P16; P16-ARC; ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 5; OTHER_DETAILS: PART OF THE ARP2/3 COMPLEX	BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS; BOS TAURUS; CATTLE; ORGANISM_TAXID: 9913; ORGAN: THYMUS	R.C.ROBINSON,K.TURBEDSKY,D.A.KAISER,H.N.HIGGS,J.-B.MARCHAND, S.CHOE,T.D.POLLARD
2001_12_12	1i35	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: PROTEIN KINASE BYR2; CHAIN: A; FRAGMENT: RAS-BINDING DOMAIN; EC: 2.7.1.-; ENGINEERED: YES	SCHIZOSACCHAROMYCES POMBE; FISSION YEAST; ORGANISM_TAXID: 4896; GENE: BYR2 (AMINO ACIDS 71 - 165);	W.GRONWALD,F.HUBER,P.GRUNEWALD,M.SPORNER,S.WOHLGEMUTH, C.HERRMANN,H.R.KALBITZER

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
DSSP header	DSSP 'HEADER' field
DSSP compnd	DSSP 'COMPND' field
DSSP source	DSSP 'SOURCE' field
DSSP author	DSSP 'AUTHOR' field