# RDB file with all secondary structure prediction methods # NOTE: the numbers for each month are NOT NOT NOT comparable # between the methods, since they base on different protein sets!! month method nprot average Q3 2001_04 apssp2 1 56.4 2003_11 apssp2 22 74.3 2003_12 apssp2 19 75.7 2004_01 apssp2 12 71.2 2004_02 apssp2 19 74.6 2004_03 apssp2 13 76.6 2004_04 apssp2 10 78.3 2004_05 apssp2 6 68.5 2004_06 apssp2 4 84.1 2004_07 apssp2 5 77.9 2004_08 apssp2 6 77.9 2004_10 apssp2 4 79.7 2004_11 apssp2 3 71.9 2005_03 apssp2 3 83.2 2005_04 apssp2 3 70.3 2005_05 apssp2 5 77.5 2005_08 apssp2 2 90.2 2001_04 phdpsi 1 82.7 2003_11 phdpsi 22 74.4 2003_12 phdpsi 17 73.4 2004_01 phdpsi 11 72.5 2004_02 phdpsi 19 72.3 2004_03 phdpsi 13 73.5 2004_04 phdpsi 8 77.6 2004_05 phdpsi 6 66.3 2004_06 phdpsi 7 79.2 2004_07 phdpsi 10 79.0 2004_08 phdpsi 17 78.5 2004_10 phdpsi 10 78.2 2004_11 phdpsi 8 66.6 2005_03 phdpsi 18 76.2 2005_04 phdpsi 12 78.8 2005_05 phdpsi 12 78.7 2005_08 phdpsi 17 77.4 2003_07 phdpsi 5 76.7 2003_08 phdpsi 5 64.5 2004_09 phdpsi 12 75.1 2004_12 phdpsi 1 85.4 2005_02 phdpsi 1 50.0 2005_06 phdpsi 4 73.3 2005_07 phdpsi 11 71.7 2005_09 phdpsi 3 73.6 2006_03 phdpsi 1 72.3 2005_03 porter 18 80.0 2005_04 porter 11 83.4 2005_05 porter 12 81.5 2005_08 porter 16 80.2 2005_02 porter 1 59.7 2005_06 porter 4 79.2 2005_07 porter 14 77.3 2005_09 porter 3 78.9 2006_03 porter 1 85.1 2001_04 prof_king 1 80.9 2003_11 prof_king 16 71.5 2003_12 prof_king 19 72.0 2004_01 prof_king 12 65.7 2004_02 prof_king 18 68.2 2004_03 prof_king 13 73.0 2004_04 prof_king 11 73.2 2004_05 prof_king 6 71.9 2004_06 prof_king 7 78.0 2004_07 prof_king 10 75.1 2004_08 prof_king 17 75.8 2004_10 prof_king 10 74.8 2004_11 prof_king 8 68.4 2005_03 prof_king 16 68.9 2005_04 prof_king 12 77.4 2005_05 prof_king 11 74.8 2005_08 prof_king 17 71.1 2003_07 prof_king 5 76.4 2003_08 prof_king 5 72.3 2004_09 prof_king 11 72.1 2004_12 prof_king 1 69.7 2005_02 prof_king 1 62.9 2005_06 prof_king 4 74.4 2005_07 prof_king 15 68.2 2005_09 prof_king 3 80.2 2006_03 prof_king 3 71.8 2001_04 profsec 1 80.9 2003_11 profsec 22 74.8 2003_12 profsec 19 75.2 2004_01 profsec 11 73.8 2004_02 profsec 19 76.2 2004_03 profsec 13 77.1 2004_04 profsec 8 79.5 2004_05 profsec 6 68.8 2004_06 profsec 7 82.8 2004_07 profsec 10 79.2 2004_08 profsec 17 79.2 2004_10 profsec 10 78.9 2004_11 profsec 8 67.9 2005_03 profsec 18 78.5 2005_04 profsec 11 78.3 2005_05 profsec 12 79.9 2005_08 profsec 17 79.2 2003_07 profsec 5 83.0 2003_08 profsec 5 64.2 2004_09 profsec 12 74.8 2004_12 profsec 1 79.8 2005_02 profsec 1 56.5 2005_06 profsec 4 74.6 2005_07 profsec 11 74.2 2005_09 profsec 3 80.0 2006_03 profsec 3 77.1 2001_04 prospect 1 70.9 2003_11 prospect 10 67.8 2003_12 prospect 15 71.3 2004_01 prospect 10 74.1 2004_02 prospect 18 64.1 2004_03 prospect 8 66.8 2004_04 prospect 10 79.9 2004_05 prospect 5 69.8 2004_06 prospect 6 74.6 2004_07 prospect 5 77.0 2004_08 prospect 5 72.6 2003_07 prospect 3 85.6 2003_08 prospect 3 79.5 2004_09 prospect 7 72.6 2001_04 psipred 1 70.9 2003_11 psipred 8 69.3 2003_12 psipred 19 79.0 2004_01 psipred 12 71.2 2004_02 psipred 19 81.1 2004_03 psipred 13 79.5 2004_04 psipred 11 79.4 2004_05 psipred 6 72.4 2004_06 psipred 7 78.7 2004_07 psipred 10 79.5 2004_08 psipred 17 81.9 2004_10 psipred 10 80.7 2004_11 psipred 8 73.6 2005_03 psipred 18 77.9 2005_04 psipred 12 79.9 2005_05 psipred 12 80.9 2005_08 psipred 17 78.3 2003_07 psipred 5 82.2 2003_08 psipred 5 74.7 2004_09 psipred 12 70.7 2004_12 psipred 1 83.1 2005_02 psipred 1 59.7 2005_06 psipred 4 79.5 2005_07 psipred 15 77.6 2005_09 psipred 2 77.2 2003_11 sable 15 75.1 2003_12 sable 19 78.0 2004_01 sable 12 68.0 2004_02 sable 19 75.1 2004_03 sable 13 76.4 2004_04 sable 11 78.7 2004_05 sable 6 68.4 2004_06 sable 7 79.9 2004_07 sable 10 76.3 2004_08 sable 17 80.7 2004_10 sable 10 79.8 2004_11 sable 8 65.9 2005_03 sable 18 77.0 2005_04 sable 12 77.0 2005_05 sable 10 76.2 2005_08 sable 17 76.4 2003_07 sable 7 82.6 2003_08 sable 5 77.6 2004_09 sable 12 73.5 2004_12 sable 1 83.1 2005_02 sable 1 59.7 2005_06 sable 3 75.2 2005_07 sable 15 74.9 2005_09 sable 3 79.2 2006_03 sable 3 80.2 2004_02 sable2 15 77.8 2004_03 sable2 13 74.6 2004_04 sable2 10 81.4 2004_05 sable2 6 69.1 2004_06 sable2 7 79.2 2004_07 sable2 10 76.5 2004_08 sable2 17 82.5 2004_10 sable2 10 77.5 2004_11 sable2 8 67.1 2005_03 sable2 18 78.6 2005_04 sable2 12 76.2 2005_05 sable2 10 78.7 2005_08 sable2 9 74.6 2004_09 sable2 12 74.1 2004_12 sable2 1 87.6 2005_02 sable2 1 58.1 2005_06 sable2 4 77.9 2005_07 sable2 10 74.3 2005_09 sable2 2 78.7 2001_04 samt99_sec 1 78.2 2003_11 samt99_sec 22 76.1 2003_12 samt99_sec 18 79.8 2004_01 samt99_sec 12 74.7 2004_02 samt99_sec 19 76.1 2004_03 samt99_sec 13 77.7 2004_04 samt99_sec 11 82.3 2004_05 samt99_sec 6 77.9 2004_06 samt99_sec 7 77.9 2004_07 samt99_sec 10 79.2 2004_08 samt99_sec 16 81.3 2004_10 samt99_sec 10 78.5 2004_11 samt99_sec 6 71.7 2005_03 samt99_sec 18 78.6 2005_04 samt99_sec 3 67.0 2005_05 samt99_sec 7 71.1 2005_08 samt99_sec 3 70.8 2003_07 samt99_sec 5 81.8 2003_08 samt99_sec 5 78.0 2004_09 samt99_sec 12 76.4 2004_12 samt99_sec 1 69.7 2005_02 samt99_sec 1 53.2 2005_06 samt99_sec 4 78.4 2005_07 samt99_sec 14 76.4 2003_11 scratch 22 76.8 2003_12 scratch 13 75.7 2004_01 scratch 11 70.0 2004_02 scratch 19 77.4 2004_03 scratch 13 75.5 2004_04 scratch 11 78.5 2004_05 scratch 6 74.4 2004_06 scratch 7 75.0 2004_07 scratch 10 78.1 2004_08 scratch 17 77.6 2004_10 scratch 1 71.4 2004_11 scratch 4 71.8 2005_03 scratch 18 78.2 2005_04 scratch 12 77.3 2005_05 scratch 12 74.8 2005_08 scratch 15 76.1 2003_07 scratch 5 82.9 2003_08 scratch 5 77.0 2004_09 scratch 4 68.6 2004_12 scratch 1 86.5 2005_02 scratch 1 43.5 2005_06 scratch 4 76.5 2005_07 scratch 15 75.5 2004_02 sspro4 4 80.8 2004_03 sspro4 13 75.3 2004_04 sspro4 11 82.0 2004_05 sspro4 6 72.0 2004_06 sspro4 7 78.9 2004_07 sspro4 10 80.0 2004_08 sspro4 17 82.4 2004_10 sspro4 1 72.0 2004_11 sspro4 4 77.1 2005_03 sspro4 18 77.9 2005_04 sspro4 12 78.8 2005_05 sspro4 12 76.4 2005_08 sspro4 16 78.5 2004_09 sspro4 4 71.2 2004_12 sspro4 1 82.0 2005_02 sspro4 1 46.8 2005_06 sspro4 4 76.8 2005_07 sspro4 15 76.2 2006_03 sspro4 3 77.6 2004_01 yaspin 7 70.7 2004_02 yaspin 19 60.9 2004_03 yaspin 13 71.0 2004_04 yaspin 11 77.8 2004_05 yaspin 6 62.1 2004_06 yaspin 7 78.9 2004_07 yaspin 6 76.3 2004_08 yaspin 4 91.6 2004_10 yaspin 10 79.0 2004_11 yaspin 7 63.6 2005_03 yaspin 18 75.6 2005_04 yaspin 11 74.6 2005_05 yaspin 12 80.2 2005_08 yaspin 17 76.0 2004_12 yaspin 1 75.3 2005_02 yaspin 1 59.7 2005_06 yaspin 4 77.9 2005_07 yaspin 14 74.6 2005_09 yaspin 3 77.5 2006_03 yaspin 3 81.0