EVA summary for category sec (1)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	553	127	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	399	94	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	133	38	method/jufo.html
mlrprdsec	32	11	method/mlrprdsec.html
PHD	482	113	method/phd.html
PHDpsi	476	113	method/phdpsi.html
Porter	35	11	method/porter.html
PROF_king	476	119	method/prof_king.html
PROFsec	479	113	method/profsec.html
Prospect	315	87	method/prospect.html
PSIpred	479	120	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	190	57	method/sable.html
SABLE2	133	40	method/sable2.html
SAM-T99sec	418	117	method/samt99_sec.html
SCRATCH (SSpro3)	253	72	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html
SSpro4	104	36	method/sspro4.html
yaspin	115	36	method/yaspin.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 60 proteins and 8 methods (HTML - ASCII)
- set 2: 156 proteins and 6 methods (HTML - ASCII)
- set 3: 156 proteins and 6 methods (HTML - ASCII)
- set 4: 160 proteins and 5 methods (HTML - ASCII)
- set 5: 160 proteins and 5 methods (HTML - ASCII)
- set 6: 177 proteins and 4 methods (HTML - ASCII)
Detail level 1 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	60	dssp	1	APSSP2	73.7	+/-1.8	73.1	+/-2.3	0.35	+/-0.02	91.7	+/-3.6
				PHD	72.5	+/-1.7	67.6	+/-2.4	0.33	+/-0.02	90.0	+/-3.9
				PHDpsi	72.6	+/-1.7	67.8	+/-2.4	0.34	+/-0.02	88.3	+/-4.2
				PROFsec	75.6	+/-1.8	76.0	+/-2.3	0.38	+/-0.03	85.0	+/-4.6
				PSIpred	76.6	+/-1.7	76.2	+/-2.5	0.36	+/-0.03	88.3	+/-4.2
				SAM-T99sec	76.3	+/-1.5	72.9	+/-1.9	0.38	+/-0.02	91.7	+/-3.6
common 1	60	dssp	2	PROF_king	70.4	+/-1.9	66.9	+/-2.5	0.32	+/-0.02	86.7	+/-4.4
				Prospect	69.2	+/-2.0	66.4	+/-2.7	0.31	+/-0.02	85.0	+/-4.6

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	156	dssp	1	PSIpred	77.8	+/-0.9	76.2	+/-1.3	0.38	+/-0.01	84.6	+/-2.9
				SAM-T99sec	77.7	+/-0.8	75.3	+/-1.2	0.39	+/-0.01	84.0	+/-2.9
common 2	156	dssp	2	PROFsec	76.4	+/-0.9	75.5	+/-1.2	0.37	+/-0.01	81.4	+/-3.1
common 2	156	dssp	3	PHD	74.5	+/-0.9	71.0	+/-1.3	0.34	+/-0.01	80.8	+/-3.2
				PHDpsi	74.6	+/-0.9	71.1	+/-1.3	0.35	+/-0.01	80.8	+/-3.2
common 2	156	dssp	4	PROF_king	72.3	+/-1.0	67.9	+/-1.4	0.32	+/-0.01	79.5	+/-3.2

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	156	dssp	1	PSIpred	77.8	+/-0.9	76.2	+/-1.3	0.38	+/-0.01	84.6	+/-2.9
				SAM-T99sec	77.7	+/-0.8	75.3	+/-1.2	0.39	+/-0.01	84.0	+/-2.9
common 3	156	dssp	2	PROFsec	76.4	+/-0.9	75.5	+/-1.2	0.37	+/-0.01	81.4	+/-3.1
common 3	156	dssp	3	PHD	74.5	+/-0.9	71.0	+/-1.3	0.34	+/-0.01	80.8	+/-3.2
				PHDpsi	74.6	+/-0.9	71.1	+/-1.3	0.35	+/-0.01	80.8	+/-3.2
common 3	156	dssp	4	PROF_king	72.3	+/-1.0	67.9	+/-1.4	0.32	+/-0.01	79.5	+/-3.2

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	160	dssp	1	PSIpred	77.7	+/-0.9	76.1	+/-1.3	0.37	+/-0.02	85.0	+/-2.8
				SAM-T99sec	77.6	+/-0.8	75.0	+/-1.2	0.38	+/-0.01	84.4	+/-2.9
common 4	160	dssp	2	PROFsec	76.6	+/-0.9	75.5	+/-1.2	0.38	+/-0.01	81.9	+/-3.1
common 4	160	dssp	3	PHD	74.5	+/-0.9	70.7	+/-1.3	0.34	+/-0.01	81.2	+/-3.1
				PHDpsi	74.6	+/-0.9	70.8	+/-1.3	0.35	+/-0.01	81.2	+/-3.1

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	160	dssp	1	PSIpred	77.7	+/-0.9	76.1	+/-1.3	0.37	+/-0.02	85.0	+/-2.8
				SAM-T99sec	77.6	+/-0.8	75.0	+/-1.2	0.38	+/-0.01	84.4	+/-2.9
common 5	160	dssp	2	PROFsec	76.6	+/-0.9	75.5	+/-1.2	0.38	+/-0.01	81.9	+/-3.1
common 5	160	dssp	3	PHD	74.5	+/-0.9	70.7	+/-1.3	0.34	+/-0.01	81.2	+/-3.1
				PHDpsi	74.6	+/-0.9	70.8	+/-1.3	0.35	+/-0.01	81.2	+/-3.1

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	177	dssp	1	PSIpred	78.0	+/-0.9	76.0	+/-1.2	0.38	+/-0.01	84.7	+/-2.7
common 6	177	dssp	2	PROFsec	76.8	+/-0.9	75.2	+/-1.2	0.38	+/-0.01	81.4	+/-2.9
common 6	177	dssp	3	PHD	75.0	+/-0.9	71.0	+/-1.2	0.35	+/-0.01	81.4	+/-2.9
				PHDpsi	75.2	+/-0.9	71.0	+/-1.2	0.35	+/-0.01	81.4	+/-2.9