EVA summary for category sec (1)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	539	123	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	395	91	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	133	38	method/jufo.html
mlrprdsec	21	7	method/mlrprdsec.html
PHD	468	109	method/phd.html
PHDpsi	462	109	method/phdpsi.html
Porter	21	7	method/porter.html
PROF_king	463	115	method/prof_king.html
PROFsec	465	109	method/profsec.html
Prospect	315	87	method/prospect.html
PSIpred	465	116	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	178	53	method/sable.html
SABLE2	121	36	method/sable2.html
SAM-T99sec	415	115	method/samt99_sec.html
SCRATCH (SSpro3)	239	68	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html
SSpro4	90	32	method/sspro4.html
yaspin	102	32	method/yaspin.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 60 proteins and 8 methods (HTML - ASCII)
- set 2: 153 proteins and 6 methods (HTML - ASCII)
- set 3: 153 proteins and 6 methods (HTML - ASCII)
- set 4: 157 proteins and 5 methods (HTML - ASCII)
- set 5: 157 proteins and 5 methods (HTML - ASCII)
- set 6: 163 proteins and 4 methods (HTML - ASCII)
Detail level 1 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	60	dssp	1	APSSP2	73.7	+/-1.8	73.1	+/-2.3	0.35	+/-0.02	91.7	+/-3.6
				PHD	72.5	+/-1.7	67.6	+/-2.4	0.33	+/-0.02	90.0	+/-3.9
				PHDpsi	72.6	+/-1.7	67.8	+/-2.4	0.34	+/-0.02	88.3	+/-4.2
				PROFsec	75.6	+/-1.8	76.0	+/-2.3	0.38	+/-0.03	85.0	+/-4.6
				PSIpred	76.6	+/-1.7	76.2	+/-2.5	0.36	+/-0.03	88.3	+/-4.2
				SAM-T99sec	76.3	+/-1.5	72.9	+/-1.9	0.38	+/-0.02	91.7	+/-3.6
common 1	60	dssp	2	PROF_king	70.4	+/-1.9	66.9	+/-2.5	0.32	+/-0.02	86.7	+/-4.4
				Prospect	69.2	+/-2.0	66.4	+/-2.7	0.31	+/-0.02	85.0	+/-4.6

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	153	dssp	1	PSIpred	77.8	+/-0.9	76.2	+/-1.3	0.38	+/-0.02	84.3	+/-2.9
				SAM-T99sec	77.9	+/-0.8	75.3	+/-1.2	0.39	+/-0.01	84.3	+/-2.9
common 2	153	dssp	2	PROFsec	76.4	+/-0.9	75.5	+/-1.2	0.38	+/-0.01	81.0	+/-3.2
common 2	153	dssp	3	PHD	74.5	+/-0.9	71.0	+/-1.3	0.35	+/-0.01	81.0	+/-3.2
				PHDpsi	74.7	+/-0.9	71.1	+/-1.3	0.35	+/-0.01	81.0	+/-3.2
common 2	153	dssp	4	PROF_king	72.2	+/-1.0	67.7	+/-1.4	0.32	+/-0.01	79.1	+/-3.3

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	153	dssp	1	PSIpred	77.8	+/-0.9	76.2	+/-1.3	0.38	+/-0.02	84.3	+/-2.9
				SAM-T99sec	77.9	+/-0.8	75.3	+/-1.2	0.39	+/-0.01	84.3	+/-2.9
common 3	153	dssp	2	PROFsec	76.4	+/-0.9	75.5	+/-1.2	0.38	+/-0.01	81.0	+/-3.2
common 3	153	dssp	3	PHD	74.5	+/-0.9	71.0	+/-1.3	0.35	+/-0.01	81.0	+/-3.2
				PHDpsi	74.7	+/-0.9	71.1	+/-1.3	0.35	+/-0.01	81.0	+/-3.2
common 3	153	dssp	4	PROF_king	72.2	+/-1.0	67.7	+/-1.4	0.32	+/-0.01	79.1	+/-3.3

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	157	dssp	1	PSIpred	77.7	+/-0.9	76.1	+/-1.3	0.38	+/-0.02	84.7	+/-2.9
				SAM-T99sec	77.8	+/-0.8	75.1	+/-1.2	0.39	+/-0.01	84.7	+/-2.9
common 4	157	dssp	2	PROFsec	76.6	+/-0.9	75.5	+/-1.2	0.38	+/-0.01	81.5	+/-3.1
common 4	157	dssp	3	PHD	74.5	+/-0.9	70.7	+/-1.3	0.35	+/-0.01	81.5	+/-3.1
				PHDpsi	74.7	+/-0.9	70.8	+/-1.3	0.35	+/-0.01	81.5	+/-3.1

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	157	dssp	1	PSIpred	77.7	+/-0.9	76.1	+/-1.3	0.38	+/-0.02	84.7	+/-2.9
				SAM-T99sec	77.8	+/-0.8	75.1	+/-1.2	0.39	+/-0.01	84.7	+/-2.9
common 5	157	dssp	2	PROFsec	76.6	+/-0.9	75.5	+/-1.2	0.38	+/-0.01	81.5	+/-3.1
common 5	157	dssp	3	PHD	74.5	+/-0.9	70.7	+/-1.3	0.35	+/-0.01	81.5	+/-3.1
				PHDpsi	74.7	+/-0.9	70.8	+/-1.3	0.35	+/-0.01	81.5	+/-3.1

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	163	dssp	1	PSIpred	77.8	+/-0.9	76.1	+/-1.3	0.38	+/-0.01	84.7	+/-2.8
common 6	163	dssp	2	PROFsec	76.5	+/-0.9	75.2	+/-1.2	0.38	+/-0.01	81.0	+/-3.1
common 6	163	dssp	3	PHD	74.7	+/-0.9	70.9	+/-1.3	0.35	+/-0.01	81.6	+/-3.0
				PHDpsi	74.9	+/-0.9	71.0	+/-1.3	0.35	+/-0.01	81.6	+/-3.0