EVA summary for category sec (1)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	526	119	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	393	90	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	133	38	method/jufo.html
mlrprdsec	8	3	method/mlrprdsec.html
PHD	455	105	method/phd.html
PHDpsi	449	105	method/phdpsi.html
Porter	8	3	method/porter.html
PROF_king	452	111	method/prof_king.html
PROFsec	452	105	method/profsec.html
Prospect	315	87	method/prospect.html
PSIpred	452	112	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	165	49	method/sable.html
SABLE2	108	32	method/sable2.html
SAM-T99sec	405	112	method/samt99_sec.html
SCRATCH (SSpro3)	226	64	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html
SSpro4	77	28	method/sspro4.html
yaspin	89	28	method/yaspin.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 60 proteins and 8 methods (HTML - ASCII)
- set 2: 145 proteins and 6 methods (HTML - ASCII)
- set 3: 145 proteins and 6 methods (HTML - ASCII)
- set 4: 147 proteins and 5 methods (HTML - ASCII)
- set 5: 147 proteins and 5 methods (HTML - ASCII)
- set 6: 150 proteins and 4 methods (HTML - ASCII)
Detail level 1 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	60	dssp	1	APSSP2	73.7	+/-1.8	73.1	+/-2.3	0.35	+/-0.02	91.7	+/-3.6
				PHD	72.5	+/-1.7	67.6	+/-2.4	0.33	+/-0.02	90.0	+/-3.9
				PHDpsi	72.6	+/-1.7	67.8	+/-2.4	0.34	+/-0.02	88.3	+/-4.2
				PROFsec	75.6	+/-1.8	76.0	+/-2.3	0.38	+/-0.03	85.0	+/-4.6
				PSIpred	76.6	+/-1.7	76.2	+/-2.5	0.36	+/-0.03	88.3	+/-4.2
				SAM-T99sec	76.3	+/-1.5	72.9	+/-1.9	0.38	+/-0.02	91.7	+/-3.6
common 1	60	dssp	2	PROF_king	70.4	+/-1.9	66.9	+/-2.5	0.32	+/-0.02	86.7	+/-4.4
				Prospect	69.2	+/-2.0	66.4	+/-2.7	0.31	+/-0.02	85.0	+/-4.6

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	145	dssp	1	PSIpred	77.9	+/-0.9	76.3	+/-1.4	0.38	+/-0.02	84.1	+/-3.0
				SAM-T99sec	77.9	+/-0.9	75.6	+/-1.2	0.39	+/-0.01	84.8	+/-3.0
common 2	145	dssp	2	PROFsec	76.3	+/-0.9	75.5	+/-1.3	0.38	+/-0.01	80.7	+/-3.3
common 2	145	dssp	3	PHD	74.4	+/-1.0	71.1	+/-1.4	0.35	+/-0.01	80.7	+/-3.3
				PHDpsi	74.5	+/-1.0	71.2	+/-1.4	0.35	+/-0.01	80.7	+/-3.3
common 2	145	dssp	4	PROF_king	72.2	+/-1.0	68.2	+/-1.4	0.32	+/-0.02	78.6	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	145	dssp	1	PSIpred	77.9	+/-0.9	76.3	+/-1.4	0.38	+/-0.02	84.1	+/-3.0
				SAM-T99sec	77.9	+/-0.9	75.6	+/-1.2	0.39	+/-0.01	84.8	+/-3.0
common 3	145	dssp	2	PROFsec	76.3	+/-0.9	75.5	+/-1.3	0.38	+/-0.01	80.7	+/-3.3
common 3	145	dssp	3	PHD	74.4	+/-1.0	71.1	+/-1.4	0.35	+/-0.01	80.7	+/-3.3
				PHDpsi	74.5	+/-1.0	71.2	+/-1.4	0.35	+/-0.01	80.7	+/-3.3
common 3	145	dssp	4	PROF_king	72.2	+/-1.0	68.2	+/-1.4	0.32	+/-0.02	78.6	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	147	dssp	1	PSIpred	77.7	+/-1.0	76.2	+/-1.4	0.38	+/-0.02	84.4	+/-3.0
				SAM-T99sec	77.8	+/-0.9	75.5	+/-1.2	0.39	+/-0.01	85.0	+/-3.0
common 4	147	dssp	2	PROFsec	76.4	+/-0.9	75.5	+/-1.3	0.38	+/-0.02	81.0	+/-3.2
common 4	147	dssp	3	PHD	74.4	+/-1.0	71.0	+/-1.4	0.35	+/-0.02	81.0	+/-3.2
				PHDpsi	74.5	+/-1.0	71.1	+/-1.4	0.35	+/-0.01	81.0	+/-3.2

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	147	dssp	1	PSIpred	77.7	+/-1.0	76.2	+/-1.4	0.38	+/-0.02	84.4	+/-3.0
				SAM-T99sec	77.8	+/-0.9	75.5	+/-1.2	0.39	+/-0.01	85.0	+/-3.0
common 5	147	dssp	2	PROFsec	76.4	+/-0.9	75.5	+/-1.3	0.38	+/-0.02	81.0	+/-3.2
common 5	147	dssp	3	PHD	74.4	+/-1.0	71.0	+/-1.4	0.35	+/-0.02	81.0	+/-3.2
				PHDpsi	74.5	+/-1.0	71.1	+/-1.4	0.35	+/-0.01	81.0	+/-3.2

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	150	dssp	1	PSIpred	77.6	+/-1.0	76.2	+/-1.4	0.38	+/-0.02	84.0	+/-3.0
common 6	150	dssp	2	PROFsec	76.2	+/-0.9	75.3	+/-1.3	0.38	+/-0.02	80.7	+/-3.2
common 6	150	dssp	3	PHD	74.3	+/-1.0	71.0	+/-1.4	0.35	+/-0.01	80.7	+/-3.2
				PHDpsi	74.5	+/-1.0	71.1	+/-1.4	0.35	+/-0.01	80.7	+/-3.2