EVA summary for category sec (1)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	520	118	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	393	90	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	133	38	method/jufo.html
mlrprdsec	0	0	method/mlrprdsec.html
PHD	449	104	method/phd.html
PHDpsi	443	104	method/phdpsi.html
Porter	2	2	method/porter.html
PROF_king	446	110	method/prof_king.html
PROFsec	446	104	method/profsec.html
Prospect	315	87	method/prospect.html
PSIpred	446	111	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	159	48	method/sable.html
SABLE2	102	31	method/sable2.html
SAM-T99sec	399	111	method/samt99_sec.html
SCRATCH (SSpro3)	220	63	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html
SSpro4	71	27	method/sspro4.html
yaspin	83	27	method/yaspin.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 60 proteins and 8 methods (HTML - ASCII)
- set 2: 139 proteins and 6 methods (HTML - ASCII)
- set 3: 139 proteins and 6 methods (HTML - ASCII)
- set 4: 141 proteins and 5 methods (HTML - ASCII)
- set 5: 141 proteins and 5 methods (HTML - ASCII)
- set 6: 144 proteins and 4 methods (HTML - ASCII)
Detail level 1 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	60	dssp	1	APSSP2	73.7	+/-1.8	73.1	+/-2.3	0.35	+/-0.02	91.7	+/-3.6
				PHD	72.5	+/-1.7	67.6	+/-2.4	0.33	+/-0.02	90.0	+/-3.9
				PHDpsi	72.6	+/-1.7	67.8	+/-2.4	0.34	+/-0.02	88.3	+/-4.2
				PROFsec	75.6	+/-1.8	76.0	+/-2.3	0.38	+/-0.03	85.0	+/-4.6
				PSIpred	76.6	+/-1.7	76.2	+/-2.5	0.36	+/-0.03	88.3	+/-4.2
				SAM-T99sec	76.3	+/-1.5	72.9	+/-1.9	0.38	+/-0.02	91.7	+/-3.6
common 1	60	dssp	2	PROF_king	70.4	+/-1.9	66.9	+/-2.5	0.32	+/-0.02	86.7	+/-4.4
				Prospect	69.2	+/-2.0	66.4	+/-2.7	0.31	+/-0.02	85.0	+/-4.6

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	139	dssp	1	PSIpred	77.9	+/-1.0	76.3	+/-1.4	0.38	+/-0.02	83.5	+/-3.2
				SAM-T99sec	77.8	+/-0.9	75.7	+/-1.3	0.39	+/-0.01	84.2	+/-3.1
common 2	139	dssp	2	PROFsec	76.3	+/-1.0	75.3	+/-1.4	0.38	+/-0.02	80.6	+/-3.4
common 2	139	dssp	3	PHD	74.2	+/-1.0	70.9	+/-1.4	0.35	+/-0.02	79.9	+/-3.4
				PHDpsi	74.3	+/-1.0	71.0	+/-1.4	0.35	+/-0.02	79.9	+/-3.4
common 2	139	dssp	4	PROF_king	72.4	+/-1.1	68.2	+/-1.5	0.32	+/-0.02	80.6	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	139	dssp	1	PSIpred	77.9	+/-1.0	76.3	+/-1.4	0.38	+/-0.02	83.5	+/-3.2
				SAM-T99sec	77.8	+/-0.9	75.7	+/-1.3	0.39	+/-0.01	84.2	+/-3.1
common 3	139	dssp	2	PROFsec	76.3	+/-1.0	75.3	+/-1.4	0.38	+/-0.02	80.6	+/-3.4
common 3	139	dssp	3	PHD	74.2	+/-1.0	70.9	+/-1.4	0.35	+/-0.02	79.9	+/-3.4
				PHDpsi	74.3	+/-1.0	71.0	+/-1.4	0.35	+/-0.02	79.9	+/-3.4
common 3	139	dssp	4	PROF_king	72.4	+/-1.1	68.2	+/-1.5	0.32	+/-0.02	80.6	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	141	dssp	1	PSIpred	77.8	+/-1.0	76.3	+/-1.4	0.38	+/-0.02	83.7	+/-3.1
				SAM-T99sec	77.7	+/-0.9	75.5	+/-1.3	0.39	+/-0.02	84.4	+/-3.1
common 4	141	dssp	2	PROFsec	76.4	+/-1.0	75.3	+/-1.4	0.38	+/-0.02	80.9	+/-3.3
common 4	141	dssp	3	PHD	74.2	+/-1.0	70.8	+/-1.4	0.35	+/-0.02	80.1	+/-3.4
				PHDpsi	74.4	+/-1.0	70.9	+/-1.4	0.35	+/-0.02	80.1	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	141	dssp	1	PSIpred	77.8	+/-1.0	76.3	+/-1.4	0.38	+/-0.02	83.7	+/-3.1
				SAM-T99sec	77.7	+/-0.9	75.5	+/-1.3	0.39	+/-0.02	84.4	+/-3.1
common 5	141	dssp	2	PROFsec	76.4	+/-1.0	75.3	+/-1.4	0.38	+/-0.02	80.9	+/-3.3
common 5	141	dssp	3	PHD	74.2	+/-1.0	70.8	+/-1.4	0.35	+/-0.02	80.1	+/-3.4
				PHDpsi	74.4	+/-1.0	70.9	+/-1.4	0.35	+/-0.02	80.1	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	144	dssp	1	PSIpred	77.6	+/-1.0	76.3	+/-1.4	0.38	+/-0.02	83.3	+/-3.1
common 6	144	dssp	2	PROFsec	76.2	+/-1.0	75.1	+/-1.4	0.38	+/-0.02	80.6	+/-3.3
common 6	144	dssp	3	PHD	74.1	+/-1.0	70.8	+/-1.4	0.35	+/-0.02	79.9	+/-3.4
				PHDpsi	74.3	+/-1.0	70.9	+/-1.4	0.35	+/-0.02	79.9	+/-3.4