EVA summary for category sec (1)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	518	116	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	393	90	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	133	38	method/jufo.html
mlrprdsec	0	0	method/mlrprdsec.html
PHD	447	102	method/phd.html
PHDpsi	441	102	method/phdpsi.html
Porter	0	0	method/porter.html
PROF_king	444	108	method/prof_king.html
PROFsec	444	102	method/profsec.html
Prospect	315	87	method/prospect.html
PSIpred	444	109	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	157	46	method/sable.html
SABLE2	100	29	method/sable2.html
SAM-T99sec	397	109	method/samt99_sec.html
SCRATCH (SSpro3)	218	61	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html
SSpro4	69	25	method/sspro4.html
yaspin	81	25	method/yaspin.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 60 proteins and 8 methods (HTML - ASCII)
- set 2: 137 proteins and 6 methods (HTML - ASCII)
- set 3: 137 proteins and 6 methods (HTML - ASCII)
- set 4: 139 proteins and 5 methods (HTML - ASCII)
- set 5: 139 proteins and 5 methods (HTML - ASCII)
- set 6: 142 proteins and 4 methods (HTML - ASCII)
Detail level 1 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	60	dssp	1	APSSP2	73.7	+/-1.8	73.1	+/-2.3	0.35	+/-0.02	91.7	+/-3.6
				PHD	72.5	+/-1.7	67.6	+/-2.4	0.33	+/-0.02	90.0	+/-3.9
				PHDpsi	72.6	+/-1.7	67.8	+/-2.4	0.34	+/-0.02	88.3	+/-4.2
				PROFsec	75.6	+/-1.8	76.0	+/-2.3	0.38	+/-0.03	85.0	+/-4.6
				PSIpred	76.6	+/-1.7	76.2	+/-2.5	0.36	+/-0.03	88.3	+/-4.2
				SAM-T99sec	76.3	+/-1.5	72.9	+/-1.9	0.38	+/-0.02	91.7	+/-3.6
common 1	60	dssp	2	PROF_king	70.4	+/-1.9	66.9	+/-2.5	0.32	+/-0.02	86.7	+/-4.4
				Prospect	69.2	+/-2.0	66.4	+/-2.7	0.31	+/-0.02	85.0	+/-4.6

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	137	dssp	1	PSIpred	78.0	+/-1.0	76.3	+/-1.4	0.38	+/-0.02	83.9	+/-3.1
				SAM-T99sec	77.9	+/-0.9	75.7	+/-1.3	0.39	+/-0.02	84.7	+/-3.1
common 2	137	dssp	2	PROFsec	76.4	+/-1.0	75.4	+/-1.4	0.38	+/-0.02	80.3	+/-3.4
common 2	137	dssp	3	PHD	74.5	+/-1.0	71.1	+/-1.4	0.35	+/-0.02	80.3	+/-3.4
				PHDpsi	74.7	+/-1.0	71.2	+/-1.4	0.35	+/-0.02	80.3	+/-3.4
common 2	137	dssp	4	PROF_king	72.7	+/-1.0	68.5	+/-1.5	0.32	+/-0.02	80.3	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	137	dssp	1	PSIpred	78.0	+/-1.0	76.3	+/-1.4	0.38	+/-0.02	83.9	+/-3.1
				SAM-T99sec	77.9	+/-0.9	75.7	+/-1.3	0.39	+/-0.02	84.7	+/-3.1
common 3	137	dssp	2	PROFsec	76.4	+/-1.0	75.4	+/-1.4	0.38	+/-0.02	80.3	+/-3.4
common 3	137	dssp	3	PHD	74.5	+/-1.0	71.1	+/-1.4	0.35	+/-0.02	80.3	+/-3.4
				PHDpsi	74.7	+/-1.0	71.2	+/-1.4	0.35	+/-0.02	80.3	+/-3.4
common 3	137	dssp	4	PROF_king	72.7	+/-1.0	68.5	+/-1.5	0.32	+/-0.02	80.3	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	139	dssp	1	PSIpred	77.8	+/-1.0	76.2	+/-1.5	0.38	+/-0.02	84.2	+/-3.1
				SAM-T99sec	77.8	+/-0.9	75.5	+/-1.3	0.39	+/-0.02	84.9	+/-3.0
common 4	139	dssp	2	PROFsec	76.5	+/-1.0	75.4	+/-1.4	0.38	+/-0.02	80.6	+/-3.4
common 4	139	dssp	3	PHD	74.5	+/-1.0	71.0	+/-1.4	0.35	+/-0.02	80.6	+/-3.4
				PHDpsi	74.7	+/-1.0	71.1	+/-1.4	0.35	+/-0.02	80.6	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	139	dssp	1	PSIpred	77.8	+/-1.0	76.2	+/-1.5	0.38	+/-0.02	84.2	+/-3.1
				SAM-T99sec	77.8	+/-0.9	75.5	+/-1.3	0.39	+/-0.02	84.9	+/-3.0
common 5	139	dssp	2	PROFsec	76.5	+/-1.0	75.4	+/-1.4	0.38	+/-0.02	80.6	+/-3.4
common 5	139	dssp	3	PHD	74.5	+/-1.0	71.0	+/-1.4	0.35	+/-0.02	80.6	+/-3.4
				PHDpsi	74.7	+/-1.0	71.1	+/-1.4	0.35	+/-0.02	80.6	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	142	dssp	1	PSIpred	77.7	+/-1.0	76.2	+/-1.4	0.38	+/-0.02	83.8	+/-3.1
common 6	142	dssp	2	PROFsec	76.3	+/-1.0	75.1	+/-1.4	0.38	+/-0.02	80.3	+/-3.4
common 6	142	dssp	3	PHD	74.4	+/-1.0	71.0	+/-1.4	0.35	+/-0.02	80.3	+/-3.4
				PHDpsi	74.6	+/-1.0	71.1	+/-1.4	0.35	+/-0.02	80.3	+/-3.4