EVA summary for category sec (1)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	513	113	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	392	89	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	133	38	method/jufo.html
PHD	442	99	method/phd.html
PHDpsi	436	99	method/phdpsi.html
PROF_king	439	105	method/prof_king.html
PROFsec	439	99	method/profsec.html
Prospect	315	87	method/prospect.html
PSIpred	439	106	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	152	43	method/sable.html
SABLE2	95	26	method/sable2.html
SAM-T99sec	392	106	method/samt99_sec.html
SCRATCH (SSpro3)	214	58	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html
SSpro4	65	22	method/sspro4.html
yaspin	76	22	method/yaspin.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 60 proteins and 8 methods (HTML - ASCII)
- set 2: 132 proteins and 6 methods (HTML - ASCII)
- set 3: 132 proteins and 6 methods (HTML - ASCII)
- set 4: 134 proteins and 5 methods (HTML - ASCII)
- set 5: 134 proteins and 5 methods (HTML - ASCII)
- set 6: 137 proteins and 4 methods (HTML - ASCII)
Detail level 1 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	60	dssp	1	APSSP2	73.7	+/-1.8	73.1	+/-2.3	0.35	+/-0.02	91.7	+/-3.6
				PHD	72.5	+/-1.7	67.6	+/-2.4	0.33	+/-0.02	90.0	+/-3.9
				PHDpsi	72.6	+/-1.7	67.8	+/-2.4	0.34	+/-0.02	88.3	+/-4.2
				PROFsec	75.6	+/-1.8	76.0	+/-2.3	0.38	+/-0.03	85.0	+/-4.6
				PSIpred	76.6	+/-1.7	76.2	+/-2.5	0.36	+/-0.03	88.3	+/-4.2
				SAM-T99sec	76.3	+/-1.5	72.9	+/-1.9	0.38	+/-0.02	91.7	+/-3.6
common 1	60	dssp	2	PROF_king	70.4	+/-1.9	66.9	+/-2.5	0.32	+/-0.02	86.7	+/-4.4
				Prospect	69.2	+/-2.0	66.4	+/-2.7	0.31	+/-0.02	85.0	+/-4.6

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	132	dssp	1	PSIpred	78.0	+/-1.0	76.4	+/-1.5	0.38	+/-0.02	84.1	+/-3.2
				SAM-T99sec	78.0	+/-0.9	75.5	+/-1.3	0.40	+/-0.02	85.6	+/-3.1
common 2	132	dssp	2	PROFsec	76.4	+/-1.0	75.5	+/-1.4	0.37	+/-0.02	80.3	+/-3.5
common 2	132	dssp	3	PHD	74.5	+/-1.0	71.0	+/-1.4	0.34	+/-0.02	81.1	+/-3.4
				PHDpsi	74.6	+/-1.0	71.1	+/-1.4	0.35	+/-0.02	81.1	+/-3.4
common 2	132	dssp	4	PROF_king	72.6	+/-1.1	68.6	+/-1.5	0.33	+/-0.02	80.3	+/-3.5

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	132	dssp	1	PSIpred	78.0	+/-1.0	76.4	+/-1.5	0.38	+/-0.02	84.1	+/-3.2
				SAM-T99sec	78.0	+/-0.9	75.5	+/-1.3	0.40	+/-0.02	85.6	+/-3.1
common 3	132	dssp	2	PROFsec	76.4	+/-1.0	75.5	+/-1.4	0.37	+/-0.02	80.3	+/-3.5
common 3	132	dssp	3	PHD	74.5	+/-1.0	71.0	+/-1.4	0.34	+/-0.02	81.1	+/-3.4
				PHDpsi	74.6	+/-1.0	71.1	+/-1.4	0.35	+/-0.02	81.1	+/-3.4
common 3	132	dssp	4	PROF_king	72.6	+/-1.1	68.6	+/-1.5	0.33	+/-0.02	80.3	+/-3.5

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	134	dssp	1	PSIpred	77.8	+/-1.0	76.4	+/-1.5	0.38	+/-0.02	84.3	+/-3.2
				SAM-T99sec	77.9	+/-0.9	75.3	+/-1.3	0.39	+/-0.02	85.8	+/-3.0
common 4	134	dssp	2	PROFsec	76.5	+/-1.0	75.5	+/-1.4	0.38	+/-0.02	80.6	+/-3.4
common 4	134	dssp	3	PHD	74.5	+/-1.0	70.9	+/-1.5	0.34	+/-0.02	81.3	+/-3.4
				PHDpsi	74.6	+/-1.0	71.0	+/-1.5	0.35	+/-0.02	81.3	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	134	dssp	1	PSIpred	77.8	+/-1.0	76.4	+/-1.5	0.38	+/-0.02	84.3	+/-3.2
				SAM-T99sec	77.9	+/-0.9	75.3	+/-1.3	0.39	+/-0.02	85.8	+/-3.0
common 5	134	dssp	2	PROFsec	76.5	+/-1.0	75.5	+/-1.4	0.38	+/-0.02	80.6	+/-3.4
common 5	134	dssp	3	PHD	74.5	+/-1.0	70.9	+/-1.5	0.34	+/-0.02	81.3	+/-3.4
				PHDpsi	74.6	+/-1.0	71.0	+/-1.5	0.35	+/-0.02	81.3	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	137	dssp	1	PSIpred	77.6	+/-1.0	76.4	+/-1.4	0.38	+/-0.02	83.9	+/-3.1
common 6	137	dssp	2	PROFsec	76.3	+/-1.0	75.2	+/-1.4	0.37	+/-0.02	80.3	+/-3.4
common 6	137	dssp	3	PHD	74.4	+/-1.0	70.9	+/-1.4	0.34	+/-0.02	81.0	+/-3.4
				PHDpsi	74.6	+/-1.0	71.0	+/-1.4	0.34	+/-0.02	81.0	+/-3.4