EVA summary for category sec (1)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	509	111	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	391	88	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	133	38	method/jufo.html
PHD	438	97	method/phd.html
PHDpsi	432	97	method/phdpsi.html
PROF_king	435	103	method/prof_king.html
PROFsec	435	97	method/profsec.html
Prospect	315	87	method/prospect.html
PSIpred	435	104	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	148	41	method/sable.html
SABLE2	91	24	method/sable2.html
SAM-T99sec	390	104	method/samt99_sec.html
SCRATCH (SSpro3)	213	57	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html
SSpro4	64	21	method/sspro4.html
yaspin	73	20	method/yaspin.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 1 proteins and 10 methods (HTML - ASCII)
- set 2: 1 proteins and 8 methods (HTML - ASCII)
- set 3: 1 proteins and 7 methods (HTML - ASCII)
- set 4: 1 proteins and 6 methods (HTML - ASCII)
- set 5: 132 proteins and 5 methods (HTML - ASCII)
- set 6: 133 proteins and 4 methods (HTML - ASCII)
Detail level 1 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.38	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.34	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				Prospect	70.9	+/-10.0	63.7	+/-10.0	0.22	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.22	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.25	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.34	+/-10.00	0.0	+/-10.0
common 1	1	dssp	2	APSSP2	56.4	+/-10.0	45.9	+/-10.0	0.10	+/-10.00	100.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.38	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.34	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.22	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.25	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.34	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.38	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.34	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.22	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.25	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.38	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.34	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.40	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.22	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.25	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	132	dssp	1	PSIpred	77.9	+/-1.0	76.6	+/-1.5	0.39	+/-0.02	84.1	+/-3.2
				SAM-T99sec	78.2	+/-0.9	75.7	+/-1.3	0.40	+/-0.02	85.6	+/-3.1
common 5	132	dssp	2	PROFsec	76.7	+/-1.0	75.8	+/-1.4	0.38	+/-0.02	80.3	+/-3.5
common 5	132	dssp	3	PHD	74.7	+/-1.0	71.2	+/-1.5	0.35	+/-0.02	81.1	+/-3.4
				PHDpsi	74.9	+/-1.0	71.3	+/-1.5	0.35	+/-0.02	81.1	+/-3.4

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	info	ERRsiginfo	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	133	dssp	1	PSIpred	77.9	+/-1.0	76.7	+/-1.5	0.38	+/-0.02	84.2	+/-3.2
common 6	133	dssp	2	PROFsec	76.8	+/-1.0	75.8	+/-1.4	0.38	+/-0.02	80.5	+/-3.5
common 6	133	dssp	3	PHD	74.8	+/-1.0	71.3	+/-1.5	0.35	+/-0.02	80.5	+/-3.5
				PHDpsi	75.0	+/-1.0	71.5	+/-1.5	0.35	+/-0.02	80.5	+/-3.5