All threading methods

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All proteins predicted by each method are given, i.e. not only those used for common subsets
methods are sorted alphabetically
the second column gives the average accuracy over all proteins for the respective method
Note that the months are NOT NOT comparable between the methods since different sets are used!!
ASCII file with montly averages for methods

Method	Number of proteins	Average N3.5A_Gbl% for all proteins	Comments
3dpssm	25	10.9
3ds3	25	12.1
3ds5	25	12.7
3dsn	25	11.6
arby	25	10.7
burnham	?	?	no longer tested
cmap	23	2.2
cnbpred	17	5.5
consens	8	6.0
fams	25	7.2
famsd	25	6.6
ffas03	24	12.6
3dpssm	?	?	no longer tested
forte1	24	8.5
fugsa	?	?	no longer tested
fugu2	25	9.5
fugu3	25	9.6
genthreader	25	5.5
hmmstr	22	1.6
inbgu	25	10.3
jigsaw	15	4.4
libellula	21	9.8
loopp	19	3.7
mgenthreader	25	6.8
mpalign	25	7.0
orf_b	?	?	no longer tested
orf_c	?	?	no longer tested
orfblast	25	4.4
orfeus	25	12.5
pcomb	25	8.7
pcons2	25	12.5
pcons3	25	12.9
pdbblast	24	3.2
pilot	9	4.5
pmodel	25	14.8
pmodel3	25	14.4
prospect	25	5.8
protfinder	19	2.8
protinfoab	25	4.0
protinfocm	25	2.3
protinfofr	25	1.3
pspt	22	8.3
raptor	25	11.6
robetta	25	10.2
rpfold	23	1.1
samt02	25	12.5
samt99	24	1.9
shgu	25	10.0
superfamily	25	8.4
supfampp	25	5.9
tsunami	23	1.0