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NLSdb |
| Signal |
The NLS motif in one letter amino acid code. Help with the regular expression syntax used to represent the NLS motifs. |
| Origin |
This field describes whether the NLS has been found by direct experiments, or if it is a potential NLS discovered through 'in silico mutagenesis'. |
| Annotation |
This field describes the protein family in which an experimental NLS was first established. |
| Reference |
The primary literature describing the experimental NLS. Also provides a link to the PubMed citation. |
| SwissProteins |
Proteins in the SWISS-PROT database in which the NLS is found. |
| PdbProteins |
Sequences in PDB in which the NLS is found. |
| TremblPoteins |
Sequences from the TrEMBL database in which the NLS is found.
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| PepProteins |
Proteins from the PEP database (entirely sequences eukaryotic proteomes) in which the NLS is found. Currently NLSdb contains sequences from Arabidopsis thaliana (plant), Caenorhabditis elegans (worm), Drosophila melanogaster (fly), Mus musculus (mouse), Homo sapiens (human, partial) and Saccharomyces cerevisiae (yeast). |
| DNA-binding |
This field describes whether the NLS is observed to overlap with known DNA-binding regions of proteins.. |
| ConfidenceTotal |
The number of subcellular localization annotated proteins in SWISS-PROT in which this NLS is found. |
| ConfidenceNuclear |
% of localization annotated proteins which are nuclear. |
