LOCtarget:(database of predicted subcellular localization for structural genomics targets.)

Number of database entries: 49917

For each protein, subcellular localization predicions are made by upto 4 different methods: predictNLS (nuclear localization signals), LocHom (using homology), LocKey (using keywords) and Locnet (using neural networks). 'Localization predicition 1' is our most confident subcellular localization prediction for the protein.

PDB identifier Localization prediction 1 Localization prediction 2 Localization prediction 3 Localization prediction 4
Method Loci Confidence Details Method Loci Confidence Details Method Loci Confidence Details Method Loci Confidence Details
HR1963 Prokaryotic LOCtarget Cytoplasmic 0.25
APC23145 Prokaryotic LOCtarget Extracellular 2.92
At2g42590 Eukaryotic LocKey Nuclear 100 Neurogenesis,Acetylation,Neurone,DNA LocHom Cytoplasmic 97 143e_human LOCtarget Extracellular 0.37
200001165 Prokaryotic LOCtarget Cytoplasmic 1.12
OPPF:34 Prokaryotic LOCtarget Cytoplasmic 0.48
At1g11690 Prokaryotic LOCtarget Cytoplasmic 0.86
Lmaj007040AAA Prokaryotic LOCtarget Cytoplasmic 0.91
At4g34670 Eukaryotic LocHom Cytoplasmic 100 rs3a_catro LOCtarget Nuclear 2.15
F36G9.15 Prokaryotic LOCtarget Cytoplasmic 0.63
200000179 Prokaryotic LOCtarget Cytoplasmic 0.53
1387 Prokaryotic LocHom Cytoplasmic 74 rifk_human LOCtarget Cytoplasmic 0.74
Lmaj003267AAA Prokaryotic LOCtarget Cytoplasmic 1.88
200000197 Prokaryotic LOCtarget Cytoplasmic 0.58
Y18D10A.19A Prokaryotic LocHom Cytoplasmic 73 fkb1_human LOCtarget Cytoplasmic 0.52
Rv2874 Prokaryotic LOCtarget Cytoplasmic 1.21
WR166 Prokaryotic LOCtarget Cytoplasmic 0.74
Lmaj008577AAA Prokaryotic LOCtarget Cytoplasmic 1.36
HI0575 Prokaryotic LOCtarget Cytoplasmic 0.99
APC23279 Prokaryotic LOCtarget Cytoplasmic 1.07
PaR54 Prokaryotic LOCtarget Cytoplasmic 0.24
APC35002 Prokaryotic LOCtarget Cytoplasmic 0.48
At3g03020 Prokaryotic LOCtarget Cytoplasmic 0.93
282023 Prokaryotic LOCtarget Cytoplasmic 1.79
Pfal004532AAA Prokaryotic LocHom Periplasmic No details.
SEPL_O157 Prokaryotic LOCtarget Cytoplasmic 1.64
PaR40 Prokaryotic LOCtarget Cytoplasmic 0.61
At1g31760 Prokaryotic LOCtarget Extracellular 0.75
Lmaj011146AAA Prokaryotic LOCtarget Extracellular 2.68
283390 Prokaryotic LOCtarget Cytoplasmic 1.05
APC35124 Prokaryotic LOCtarget Cytoplasmic 0.57
APC1992 Prokaryotic LocHom Periplasmic No details.
WR61 Eukaryotic LOCtarget Nuclear 4.13
355600 Prokaryotic LOCtarget Cytoplasmic 1.02
StR29 Prokaryotic LOCtarget Extracellular 0.41
MmR1A Eukaryotic LocHom Nuclear 93 tf65_xenla LocKey Nuclear 91.17 Activator,Transcription LOCtarget Nuclear 1.09
Y74C10AL.B Prokaryotic LOCtarget Cytoplasmic 0.7
C43H8.1 Prokaryotic LOCtarget Cytoplasmic 0.69
Rv3817 Prokaryotic LOCtarget Cytoplasmic 0.39
282105 Prokaryotic LOCtarget Cytoplasmic 0.91
Lmaj001698AAA Prokaryotic LOCtarget Cytoplasmic 1.01
HR2313 Prokaryotic LocHom Periplasmic No details.
mmt007019580 Prokaryotic LOCtarget Cytoplasmic 0.9
HR2460 Prokaryotic LOCtarget Cytoplasmic 1.12
C30C11.4 Eukaryotic LocHom Cytoplasmic 72 h105_crigr LOCtarget Nuclear 1.45
Lmaj005473AAA Prokaryotic LOCtarget Cytoplasmic 3.11
AR1591 Prokaryotic LOCtarget Cytoplasmic 0.55
Lmaj010188AAA Prokaryotic LOCtarget Cytoplasmic 1.48
At2g18120 Prokaryotic LOCtarget Cytoplasmic 0.88
Pfal007939AAA Prokaryotic LOCtarget Extracellular 0.6
AAC46918 Eukaryotic LocKey Nuclear 100 Zinc-finger,Proto-oncogene,Metal-binding,Chromosomal LocHom Nuclear 94 li49_caeel LOCtarget Mitochondrial 1.11