|
NMPdb Identifier |
ASC_00019 |
|
Accession Number |
19 |
|
Nuclear-Matrix Class |
ASC |
|
Date of Creation |
22-MAY-2003 (Rel. 1.0, created) |
|
Updates |
05-JUL-2004 (chop and predictions added) |
|
Protein Names |
Eukaryotic translation initiation factor 6 eIF-6 B4 integrin interactor CAB p27(BBP) B(2)GCN homolog |
|
Gene Names |
ITGB4BP EIF6 |
|
Organism |
mammalian |
|
Cell Type |
yeast |
|
primary Papers |
10085284 (1999) |
|
secondary Papers |
10085284 (1999), 12150946 (2002), 10676626 (2000) |
|
Comments |
sequence taken from human |
|
SWISSPROT ID |
IF6_HUMAN, P56537 |
|
SWISS-2DPAGE |
SWISS-2DPAGE: IF6_HUMAN SPOT: 2D-001VTA (pI/MW: 5.94/33604) |
|
Function |
Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex. |
|
Keywords |
Initiation factor, Nuclear protein, Phosphorylation, Protein biosynthesis |
|
GenBank ID |
AAB97735.1, CAA72243.1, AAC39897.1, BAB93472.1, CAC17101.1, AAH01119.1, AAH11845.1, AAH19305.1 |
|
PEP ID |
if6_human |
|
OMIM ID |
602912 |
|
Seq Source |
SWISSPROT/TrEMBL |
|
Seq Information |
245 AA; 26569 Da; calculated pI: 4.56 |
|
Sequence |
MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIG 60 RMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPD 120 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP 180 LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSL 240 IDSLT |
|
Prof sec Output |
LEEEEEEELLLEEEEEEEELLEEEEEEELLLLLHHHHHHHHHHLLLLEEEEEELLLEEEE 60 EEEEELLLEEEELLLLLHHHHHHHHHHLLLLEEEEEEHHHHLLLLLEEEELLEEEEELLL 120 LLHHHHHHHHHHLLEEEEEEEELLEEEEEEEEEEELLLLEELLLLLHHHHHHHHHHLLLL 180 EEEEEELLLLEEEEEEEEELLLEEEELLLLLLLHHHHHHHHHHLLLLLLLHHHHHHHHHH 240 HHLLL |
|
Prof acc Output |
bbbibibeebeebbbbbebbebbbbbbieieeebbibbieibeebbbbbbbbbbbbibbb 60 bbbbbbiibbbbbeeiieeibiibiebbeeebibiibeeibibbbbbbbbbbibbbbbee 120 beeebeebbiebbibibbiibbbebbbbbbbbbbbbebbbbbbebieeibeebbebbebb 180 bbbbbbiibbebbbbbbbbbbbbbbbbiebbbiibbbbibbbibieeieeibbeebiebb 240 bebbe |
|
Prof htm Output |
---------------------------------------------------HHHH----- 60 ------------------------------------------------------------ 120 ------------------------------------------------------------ 180 ------------------------------------------------------------ 240 ----- |
|
Coils Output |
------------------------------------------------------------ 60 ------------------------------------------------------------ 120 ------------------------------------------------------------ 180 ------------------------------------------------------------ 240 ----- |
|
NORSp Output |
------------------------------------------------------------ 60 ------------------------------------------------------------ 120 ------------------------------------------------------------ 180 ------------------------------------------------------------ 240 ----- |
|
Domains (CHOP) |
#1; AA 2-97; homologue=1g62A1(1-96); eval=1e-37; method=BLAST/prism_trim #2; AA 98-204; homologue=PF01912.8(1-207); eval=5.9e-24; method=HMMER/Pfam_ls #3; AA 205-245; homologue=NULL; eval=NULL; method=NULL |